LOCUS       NM_001013428            1914 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus phospholipase A2, group IID (Pla2g2d), mRNA.
ACCESSION   NM_001013428 XM_233590
VERSION     NM_001013428.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   von Allmen,C.E., Schmitz,N., Bauer,M., Hinton,H.J., Kurrer,M.O.,
            Buser,R.B., Gwerder,M., Muntwiler,S., Sparwasser,T., Beerli,R.R.
            and Bachmann,M.F.
  TITLE     Secretory phospholipase A2-IID is an effector molecule of CD4+CD25+
            regulatory T cells
  JOURNAL   Proc Natl Acad Sci U S A 106 (28), 11673-11678 (2009)
   PUBMED   19564598
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Suzuki,N., Ishizaki,J., Yokota,Y., Higashino,K., Ono,T., Ikeda,M.,
            Fujii,N., Kawamoto,K. and Hanasaki,K.
  TITLE     Structures, enzymatic properties, and expression of novel human and
            mouse secretory phospholipase A(2)s
  JOURNAL   J Biol Chem 275 (8), 5785-5793 (2000)
   PUBMED   10681567
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jul 30, 2021 this sequence version replaced NM_001013428.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091221.1, EX489505.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                JAXUCZ010000005.1  156299632-156299716
            86-230              JAXUCZ010000005.1  156302558-156302702
            231-337             JAXUCZ010000005.1  156303296-156303402
            338-1914            JAXUCZ010000005.1  156304240-156305816
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1914
                     /gene="Pla2g2d"
                     /note="phospholipase A2, group IID"
                     /db_xref="GeneID:298579"
                     /db_xref="RGD:1309862"
     exon            1..85
                     /gene="Pla2g2d"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..483
                     /gene="Pla2g2d"
                     /EC_number="3.1.1.4"
                     /note="group IID secretory phospholipase A2"
                     /codon_start=1
                     /product="group IID secretory phospholipase A2 precursor"
                     /protein_id="NP_001013446.1"
                     /db_xref="GeneID:298579"
                     /db_xref="RGD:1309862"
                     /translation="MRLALLCGLLLAGITATQGGLLNLNKMVNHMTGKKAFFSYWPYG
                     CHCGFGGKGQPKDATDWCCQKHDCCYAHLKIDGCKSLTDNYKYSISEGVIQCSDQGSW
                     CERQLCACDKEVALCLKQNLESYNKRLRYYWRPRCKGQTPTC"
     exon            86..230
                     /gene="Pla2g2d"
                     /inference="alignment:Splign:2.1.0"
     exon            231..337
                     /gene="Pla2g2d"
                     /inference="alignment:Splign:2.1.0"
     exon            338..1914
                     /gene="Pla2g2d"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtaacggg acctctaaca gctgcctgcc ttgctctgtg ctggaaccat gagacttgcc
       61 ctgctgtgtg ggctgctgct ggctggtata actgcaaccc agggagggct cctgaacctg
      121 aacaagatgg ttaaccatat gactgggaag aaagccttct tcagctactg gccctacggc
      181 tgtcactgtg gatttggtgg caaaggacaa cccaaggatg ccaccgactg gtgctgtcaa
      241 aagcacgatt gttgctatgc ccacctgaag atcgatggat gcaaaagcct gacagacaat
      301 tacaaataca gcatctctga gggcgttatc caatgctctg accaagggag ctggtgcgaa
      361 aggcaactgt gtgcttgtga caaggaggtg gccttgtgcc tgaagcaaaa cctggagagc
      421 tacaacaagc gactgcggta ctactggagg ccccgctgca aaggccagac tcccacatgc
      481 taggggaatc cactctctct gtcccctgga ttccaccctg ttcccgggca tgtcaagcat
      541 ttaagtcctg cagctgctgc ctcctgcctt ggtgtctagt ctcttggacc tgctggtttt
      601 taaagtcctc cttgcaaaag agcctggcct tgatgatgtc ctcttggtgc ctctctgctg
      661 taaaggacct ttctgatctt tctataagtg actctcctct cccttcaaac tctggtcttt
      721 ctgggcctag gatgaaatct cttttatctg ttcagagccc agccctctgg ccctgtgtcc
      781 ttctcctcaa ctaagctgtg agaccctcct ggttgagccc tgcctcatct cagattcagt
      841 ggtaccctgg tgtccaggta gtttcctaga accaagccca ttgtgggcgc caacaacaac
      901 aggacttacg ggtgggggaa actgcagcct tgttgctatg ggtgctagaa ctcggccttc
      961 tgtttcttgt ctattatgct ttctgttgga tctcttgtgg cataaagttc aggcctgggg
     1021 cccatccttt agaagcctct cttggctagc gcttctcccc agcactaagg acatcattgt
     1081 gttggactgt ctgggtggcc caacacccca caattcttct gagaccagga tactgacatg
     1141 ttctaatact ttgtctcatt ccaggcctgg tttctttctc tgcaaacttt ctccacagag
     1201 tcctctcaat aaacaacttt cacaagagtc cctgactcag gctccacctc tggggagaca
     1261 cattgtagca acatttataa attctgtgac ttccctctct cccagaacca agggcctaat
     1321 tgcaaacctc agaagtgatg ctacagctaa ggaaagagtg ctcaggggcg gcagattcag
     1381 agccagaatc catggaagat cagcttccca tatgaagaag gggaggggag ggtttggggg
     1441 tggcttcgct ggctctcttt tttggctcaa actgaccccg cctacctaca ttcttgcagc
     1501 tataggcatt gaagggactc tagccaccct ggacctgaca gacatggctg tagcaggccg
     1561 tgcccttctc tctcattctt tcggccttgc ctaaaaccac tagactgcat ttctaaagct
     1621 agttcccaca gtctcttccc ttatttagcc aattccttcc tcctcctgag gctgactacc
     1681 aaggtccagc tgtcaaagta ttaaagtcta gcaatcaaaa gcccgctttg gttcacctaa
     1741 tatgcccagt caaaacacac cattgccccc agcccattct aacacagacc tccccccttc
     1801 ccccttctta tgaattatgc ctgcaaggtc ctttgctgat gtttttctgt ctgagtcaga
     1861 aagcagccac ttcaactttt cttccctgct taataaaaga tctttctgtg aaaa
//
