LOCUS       XM_346131               2943 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phospholipase A2, group XIIB
            (Pla2g12b), transcript variant X1, mRNA.
ACCESSION   XM_346131
VERSION     XM_346131.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_346131.9.
            
            On Jan 21, 2021 this sequence version replaced XM_346131.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2943
                     /gene="Pla2g12b"
                     /note="phospholipase A2, group XIIB; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:367415"
                     /db_xref="RGD:1588484"
     CDS             1169..1756
                     /gene="Pla2g12b"
                     /codon_start=1
                     /product="group XIIB secretory phospholipase A2-like
                     protein isoform X1"
                     /protein_id="XP_346132.5"
                     /db_xref="GeneID:367415"
                     /db_xref="RGD:1588484"
                     /translation="MKLLCAFFLLWLGLVGSLAQSDPSPKGEESYSDWGLRQLRGSFE
                     SVNSYVDSFMELLGGKNGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGIKVPGSMD
                     LGIPAMTKCCNQLDVCYDTCGANKYRCDAKFRWCLHSICSDLKRSLGFVSNVEAACDS
                     LADTVFNTVWTLGCRPFMNSQRAACICAEEEKEEL"
ORIGIN      
        1 acgcatacac acacacgcac acacacacac agagatagag agacatagaa aaacaggaag
       61 aaagagagag acagcaaagg agagacagac aagagactag ttcagaatgt gtgttttaaa
      121 tacttgtggt gtggttgtcc ctattctttc ttgtcacaca atcatgatgc acacctgaaa
      181 cacattttaa ccactaccct tcctggacct taaatcttta gatgaacaca gttcttactt
      241 aaaatgagga tattactgta tttagtattt tctgcatggc attcctgacc tcggagaaag
      301 cagctgaatg ataatgtggt ccacagtggg gtcgcttccc agactggtgg ttttgtaggc
      361 atttcttcac gtgaccaaga gcaaactaca ctgaaggtga cgcccaaaca ctggactcca
      421 gtgagcaatc tcaaagcgtg gaatctcaaa caggctttct gatagcagcc tggactttta
      481 tctgcctaaa agggaggtgg gcgggaggat caccaccagg gacgacaacc ccaggatata
      541 gcactgagtg taaaaagaca ttctgcagat tcgggaaggg attcatccct gggaggacct
      601 ttgccagatg gagttagagc caaggaggga cccaggcaga aactgggctc gaaacctgaa
      661 ctctcaccaa ggcacacttg gaatttagcc cctggtaatc tgaccgctgg tgaaggtgac
      721 cccaataggg ctgcgaagtc tcacacacac cctcaagggc ctccccagga taggtataga
      781 ggaggaagtg gttcaggggt gtggctgaga tcttgggaca agctctgcag tcaagaagcc
      841 tggggagccc aagtgtgctg gagaatcccg ggactgccgt cccccttgca gagtgtgcag
      901 tcatcccctc cagcgtgttg gggtccactg ggaagtcccc tcttgggcca tcctcataca
      961 gcccctccca cggtttcacc tttgtcctct ctaatcgctc ggatcggctc ccagcctcca
     1021 tggctgtgtt taaagtccac ctctggggaa cacagactga ctgttccgat aagcccgggc
     1081 acggggctgt gcgtgtcccc gggcgtccag ggaccctggc tggggttggg gacaagagca
     1141 gcagcgaagt tctacttgtg cgagcaagat gaagctgctc tgtgccttct tcctcctgtg
     1201 gcttggcctg gtaggcagcc tggctcagag tgaccccagc cccaagggag aggagtccta
     1261 ctctgactgg ggcctgaggc agctgcgggg cagcttcgag tcggtcaaca gctacgtgga
     1321 ctccttcatg gagctgctgg gagggaagaa tggagtctgt cagtaccggt gtcgatatgg
     1381 aaaggcacca atgcccagac ctggctacaa acctcaggag cccaacggtt gtggttccta
     1441 tttcctgggt atcaaggttc cgggaagtat ggacttgggc attccagcaa tgaccaagtg
     1501 ttgtaaccag ttggacgtct gctatgacac ctgtggtgcc aacaaatacc gctgtgatgc
     1561 aaaattccga tggtgtctcc actccatctg ctctgacctc aagcggagcc tgggcttcgt
     1621 ctccaacgtg gaagcagcct gtgattctct ggctgacacc gtgttcaaca ccgtgtggac
     1681 cttgggctgc cgacccttta tgaacagtca gcgggcagcg tgcatctgcg cagaggagga
     1741 gaaagaagag ttatgaagat gaggcggctt ttccaggctc ggaggcacat cggggctgtt
     1801 tcagagacgg tggtgtggta caagtcctgc cctttcttcc aacccttcag aggtcacgag
     1861 ctggagaagg gaaacagcag gccttgtcct ttgaggaaag ttaagaaaaa gacacacaga
     1921 gtctgaaggc tgtttgctct aacactggtc tccccggccg agaaccatgt gcctggaaat
     1981 tcagttctta gttgaaagac aagccataag tagacccggc tattcctcga cctggtcatg
     2041 acagtcagaa gcgaaatctg ggggagccca aacattggag gcaatgactt ttctctggcc
     2101 cgtgtttcag ttgccagttg acacctcacg tttaataaag cacacttttt agaaaactct
     2161 aagagagatg aacgacttcc agtctcctct gtggttctgt ttcacttaat gagaacggaa
     2221 tccaggccag tgagtaagtt ctgtccgtga ggatctctcg gtggggagca gagcctggct
     2281 gatgaaggtc agatggaatt ggggcctctg agattccatt actccctccg gtggcctgct
     2341 cccaggggta tgcttagact tcaagctctg tgagagccat ctgcagatct gagatatggt
     2401 ggggatgtgt ctggttaggg gtaggggatg tgcttgcagc tgacagggag tgaaggccat
     2461 tccctcaatc gtggctctca gcactgactg tgcattagga ctacctgtgg accctttaaa
     2521 ctaggccagt caagactctg tggtctctgt ccaggccact tccattactc tgcaggtggt
     2581 ctgttgctcc aagagggcca ctaatgaaga ttataattag ctaacaaagt cacactggcc
     2641 agattcagtc caaggcccgc tgttttgtac agcatttctg aacacagcac actcactttt
     2701 atatttgttt ctgtttgttt aaagctgctc tcaccctgtc acgtcacaga gagagagaga
     2761 gagagagaga gagatattat gacaaagact aaaaggcccc cacgtctaaa acagttactt
     2821 ttgactattt ctagagaaac gttgctttct gacccaaaat tcccactcct tctatttccc
     2881 ttcctaattt cattaagtta aaccagaatt gtccatcacc ccaatggcaa ttaaagagta
     2941 gag
//
