LOCUS       XM_039106435            1990 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pejvakin (Pjvk), mRNA.
ACCESSION   XM_039106435
VERSION     XM_039106435.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106435.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1990
                     /gene="Pjvk"
                     /note="pejvakin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 ESTs, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:679552"
                     /db_xref="RGD:1587131"
     CDS             916..1974
                     /gene="Pjvk"
                     /codon_start=1
                     /product="pejvakin"
                     /protein_id="XP_038962363.1"
                     /db_xref="GeneID:679552"
                     /db_xref="RGD:1587131"
                     /translation="MFAAATKSFVKQVGDGGRLIPVPSLSEADKYQPLSLVVKKKRCF
                     LFPRCKFTSTPFTLKDILLGDRDISAGISSYQLLNYEDESDVSLYGRRSNHIVNDVGI
                     NVTGSDCIAVKASFGVVTKHEVEISTLLKEITARKINFDHSLIRQSRSSRKAVLCVVM
                     ESIRTTRQCSLSVHAGIRGEAMRFHFMDEQNPKGREKAIVFPAHTTIAFSVFELFIYL
                     DGAFDICVTSVSKGGFEREETTTFAMFYRLRNILFERNRRVMDAISRSQLYLDDLFSD
                     FYDKPLSMTDISLKEGTHIRVNLLNHNIPKGPCILCGMGNLKRETVYGCFQCSVDGVK
                     YVRLHAVPCFDIWHKRMK"
ORIGIN      
        1 tgaccgcccg gccccgcccc tcatctatct aggcaccgcc tccatgcggg tcctggctct
       61 tccaaactcc ggcctgcacc ccgcgttggt tccgcgagtt tcccctcccg cctttagtgg
      121 tgcagagcct cagtcctttg tccttagagg gaggcggctt ccttctcgga gagaaagctt
      181 gtagtaggct acgagcctag catgtttgag gagcaaggaa gaaagattaa gggttgaact
      241 actttttaaa agatttgaaa attcgaatgc taaattgcta agaaattttc cgattttggc
      301 cccgaaactt gagacccgca gagggccggc tagggtatct tgggtaggca ggctatcctg
      361 ggatgaggat agttttaaga gtcctgcatc cctgagctcg ctgctgcctg gcaggctctt
      421 gtggcctgca ggcttagggt agtggttctc atccttccta atgttgtgac cctttaatac
      481 agttcctcat attgtggtga caccccaccc ccgccaaccg taatattatt tcgttgctac
      541 ttcatttctg tagttttgct actctagtgc aaccctaggg ggtcgcaact cacaggttta
      601 gaacctctgc tttgggagct tgtaggatcc ccaaggagat gctggaggtg gacagcaagg
      661 atatttactc cagtttccag gattgctctt ctgaatgacc tgtgcaccgg ggagtgagga
      721 tgtcaacctg gaatgttgca ccttcagagt gtgttgtggg tgtgtcagac agtaccacag
      781 agagtctttg agggccctct attattcatt acctgagttc atgaagggag gcgctgttgt
      841 gaattgcaca ccggtaaact acttgaaatg ggttcgttgg ccgagggtcg cagctgatga
      901 catcttgata ttaatatgtt cgctgctgct accaagagct tcgtcaagca agttggagac
      961 ggagggagat taatccctgt cccgagcctc agcgaagctg acaagtacca acccctgagt
     1021 ctggtggtaa aaaagaagcg gtgttttctg tttcctagat gcaaattcac atccacaccc
     1081 ttcacactga aagatattct cctgggagac cgagacattt cagccggtat ttcatcttat
     1141 cagttactga attatgaaga cgagtcagat gtttccctct atggaaggcg aagcaaccat
     1201 attgtgaatg acgttgggat taatgttact ggatctgatt gcatcgcggt caaagcttcc
     1261 tttggtgtag tgaccaaaca tgaggtggaa atatcaacat tactcaagga aattactgca
     1321 cgaaaaatta actttgacca cagtttgatc cgccaatcaa ggagcagcag gaaggccgtg
     1381 ctgtgcgttg tcatggagag catcagaacc acacgccagt gctctctgtc agtgcatgct
     1441 gggattcgag gggaagccat gcggttccat tttatggatg aacagaatcc caaaggaagg
     1501 gaaaaggcta ttgttttccc ggcccacaca actatagctt tcagtgtttt tgagctcttc
     1561 atctacctgg atggtgcctt cgacatttgt gtcacatcag tgtcaaaagg aggatttgaa
     1621 agggaagaaa cgacaacctt tgccatgttc tacagactga ggaatattct ctttgaaaga
     1681 aataggagag tgatggacgc catctcgcgt tcccagcttt acctggatga tctcttttct
     1741 gacttctatg acaaacctct cagcatgact gacatttccc tcaaggaggg aactcacatc
     1801 cgagtgaact tactaaacca caacattcct aaagggccct gcatactctg cggaatgggg
     1861 aacttgaaaa gggagacagt ttatggctgc tttcagtgtt ctgtggatgg cgtgaagtac
     1921 gtgaggcttc atgcggttcc ttgctttgat atctggcaca agagaatgaa ataaaaggaa
     1981 aaggaatatg
//
