LOCUS       XM_039094436            2768 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phosphoinositide-3-kinase regulatory
            subunit 2 (Pik3r2), transcript variant X1, mRNA.
ACCESSION   XM_039094436
VERSION     XM_039094436.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094436.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2768
                     /gene="Pik3r2"
                     /note="phosphoinositide-3-kinase regulatory subunit 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 28 ESTs, 3 long SRA reads, 21 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 88 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29741"
                     /db_xref="RGD:68341"
     CDS             39..2264
                     /gene="Pik3r2"
                     /codon_start=1
                     /product="phosphatidylinositol 3-kinase regulatory subunit
                     beta isoform X1"
                     /protein_id="XP_038950364.1"
                     /db_xref="GeneID:29741"
                     /db_xref="RGD:68341"
                     /translation="MAGAEGFQYRAVYPFRRERPEDLELLPGDLLVVSRVALQALGVA
                     DGGERCPHNVGWMPGFNERTRQRGDFPGTYVEFLGPVALARPGPRPRGPRPLPARPLD
                     GPSESGHTLASLAEQFSPPEPAPPILVKLIEAIEQAELDSECYSRPELPAPRTDWSLS
                     DLEQWDRTTLYDAVKGFLLALPAAVVTPEAASEAYRAMREVTGPVGLVLEPPTLPLHQ
                     ALTLQFLLQHLGRVARRAPSPATAVHALASAFGPLLLRAPPPGGEGDGPHTWRSCHSQ
                     ALTPLLAPRSEPAPDFPVLLLERLVQEHVDEQDTAPPALPPKPSKVKPAPTALANGGS
                     TPSLQDAEWYWGDISREEVNERLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIK
                     VFHRDGHYGFSEPLTFCSVVELISHYRHESLAQYNAKLDTRLLYPVSKYQQDQVVKED
                     SVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQG
                     QTQEKCSKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKLEQDLRAQASDN
                     REIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQRKINEWLGIKNETEDQYSLMEDE
                     DALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCV
                     IYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVRAPGPGPPPAA
                     R"
ORIGIN      
        1 cctgactgtc cagacccccc caccccccgg gcccagccat ggcaggtgct gaaggcttcc
       61 agtacagggc tgtataccca ttccgccggg agcggcctga ggacctggag cttcttcctg
      121 gtgacctcct ggtggtgagc cgggtggctc tgcaggcact aggtgtggct gatggaggag
      181 agcgctgccc acacaacgtg ggctggatgc ctggcttcaa tgagcgcacc cgacagcgag
      241 gggacttccc tggaacatat gtggagttcc taggacctgt ggctctggct cgaccaggcc
      301 ctcgcccacg ggggccccgt ccgttgcctg ccaggccctt ggatggacct tctgagtcag
      361 gtcacacact ggcaagcctg gcagagcagt tctccccacc tgagcctgcg cccccgattc
      421 tggtgaagct gatagaagcc attgagcaag cagagctgga cagtgaatgc tacagtaggc
      481 cggagctgcc cgcaccacgg acagactggt ccctgagtga cttggagcag tgggaccgca
      541 ccaccttgta cgatgctgtt aagggcttcc tgctggcatt gcctgcagct gtggtgactc
      601 ctgaggctgc atcggaggct tatcgggcga tgcgggaggt tacggggcct gtggggctgg
      661 tgctggaacc cccaacgctg ccgttgcacc aggccctcac tctgcagttc ctgctgcagc
      721 acctgggccg cgtggcccgc agagcaccct caccagctac agctgtccac gcactggcca
      781 gtgccttcgg gccgctgctg ctgcgtgcgc ctccgccagg gggcgagggt gatggtcctc
      841 acacatggcg cagctgtcat tcccaggcct tgacacccct acttgcccct aggagtgagc
      901 ctgcacctga cttccctgtg ctgcttctag agaggctggt gcaggagcat gtggatgagc
      961 aagacaccgc cccgccagca ctgccaccca aaccctctaa ggtaaagccg gcacccacag
     1021 ccctggccaa tggagggagt acaccctcgc ttcaggatgc agagtggtac tggggggaca
     1081 tttccaggga agaggtgaat gagaggctcc gagacacacc tgatggtacc ttcttagtcc
     1141 gagatgcatc cagcaagatc caaggagagt acacgctcac cctcaggaaa ggcgggaaca
     1201 acaagctaat caaagtcttc caccgggacg gtcactatgg cttctcagag ccccttacct
     1261 tctgctccgt ggtagagctc atctcccact accgacatga gtcactggcc cagtacaacg
     1321 ccaagctgga cacgcgcctt ctctaccctg tgtccaagta ccagcaagac caggtggtga
     1381 aggaggacag tgtagaggct gtgggtgccc agctcaaggt ctaccaccag cagtaccagg
     1441 acaagagccg cgagtatgac cagctctatg aggaatacac acgaacctcc caggagcttc
     1501 agatgaagcg cacagccata gaggccttca acgagaccat caagatcttc gaagaacagg
     1561 gccagacaca ggaaaagtgc agcaaggagt atttggagcg cttccggcga gagggcaatg
     1621 agaaggagat gcagaggatc ctgctgaact cggagcgact caagtctcga atcgcggaga
     1681 tacatgaaag ccgcacgaag ctggagcagg atctgcgggc gcaggcctcg gacaatcgag
     1741 agattgacaa gcgcatgaac agcctcaagc ctgatctcat gcagctgcgc aagatcaggg
     1801 accagtacct cgtgtggctc acccagaaag gtgcccgaca gaggaagatc aacgagtggc
     1861 tgggaatcaa gaatgagact gaggaccagt attcactgat ggaggatgag gacgccctcc
     1921 cccaccatga ggagcgcacg tggtacgtgg gcaagatcaa ccgcacacag gcggaggaga
     1981 tgctgagtgg caaacgagac gggaccttcc tcatccggga gagcagccag cggggctgtt
     2041 acgcatgctc tgtggtggtg gatggcgaca cgaagcactg tgtcatctac cgcacagcca
     2101 ctggctttgg cttcgcagag ccctataacc tgtacggatc cctgaaggag ctggtattgc
     2161 actaccagca cgcatcactt gtgcagcaca atgacgcgct caccgtcacc ctcgcacacc
     2221 ctgtgcgtgc ccccgggcct ggcccgcccc ctgcagcacg ctgagcgccc cacctcacct
     2281 gcctccctgt ccatgtctgt cttctaatcc cttcccctgg tgaacacacg caggatgcca
     2341 tcctcccgct gcgtctgcca tgtttacaga ggctgcgggg ccactggcct gggccccccg
     2401 agttcttcaa gccatatctc cgatttagaa aggaactgtg ctaggtggtt tccaggaact
     2461 cagccctgga cacttggggc tgggcgggac ccgccccgtg gaccccaact tcccctctta
     2521 aggtcgaagt gaaaccagtc acggggttac cccgcagctg ccgagaagct ccccctctgg
     2581 agggcaaaat acaaactagc cctcgtccag gccctgcgct gttctcctga ctgtgcaatg
     2641 cctccccttt gggacaaggg ccctgagtgt gtccctgctc cctgaacccc atacctgccc
     2701 agggttgatg ggcagcaggt tttgtacggt acgtttattg atacgaatat gaaacattgt
     2761 acctgttg
//
