LOCUS       NM_001271975            1504 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus phosphatidylinositol glycan anchor biosynthesis,
            class Y (Pigy), mRNA.
ACCESSION   NM_001271975 XM_002726998
VERSION     NM_001271975.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Murakami,Y., Siripanyaphinyo,U., Hong,Y., Tashima,Y., Maeda,Y. and
            Kinoshita,T.
  TITLE     The initial enzyme for glycosylphosphatidylinositol biosynthesis
            requires PIG-Y, a seventh component
  JOURNAL   Mol Biol Cell 16 (11), 5236-5246 (2005)
   PUBMED   16162815
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001271975.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK842560.1, SRR22582416.237281.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                JAXUCZ010000008.1  28965634-28965685
            53-1504             JAXUCZ010000008.1  28966425-28967876
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..1504
                     /gene="Pigy"
                     /gene_synonym="Pigyl"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class Y"
                     /db_xref="GeneID:100365921"
                     /db_xref="RGD:2318067"
     exon            1..52
                     /gene="Pigy"
                     /gene_synonym="Pigyl"
                     /inference="alignment:Splign:2.1.0"
     exon            53..1504
                     /gene="Pigy"
                     /gene_synonym="Pigyl"
                     /inference="alignment:Splign:2.1.0"
     CDS             328..543
                     /gene="Pigy"
                     /gene_synonym="Pigyl"
                     /note="rCG31672-like"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Y"
                     /protein_id="NP_001258904.1"
                     /db_xref="GeneID:100365921"
                     /db_xref="RGD:2318067"
                     /translation="MILSLPTLTVLIPLISLAGLFYSASVEENFPEGCTSASSLCFYS
                     LLLPVTVPVYVFFHLWTWMGLKLFRHN"
ORIGIN      
        1 acggtcacag ccaggcgcag ccgggacccg gacatttaca ggccagtgaa tgtaaggaat
       61 cctttagcca gcgctgcgag ggacacgtgt gttgtctgca gtcgctggta accgcttcgt
      121 gtggtggtgg attggatcag aacgaggctg aggagccgtc accctcagcc tgggaccgct
      181 gaagtttttg tgtgctcttg ggaagcatgc ctggatgaaa gaggagtcca gagaaaggga
      241 agataagaca ggagtgcacc agcacaagaa cataactttg aaaacaaccg agttttcttg
      301 aactgtatac cttcagaagg gaggaggatg atcctgtctc tgcccaccct gactgtcctc
      361 atcccgctca tctccctggc gggcctgttc tactccgcct ctgtggaaga aaacttccca
      421 gagggctgta ccagcgccag cagcctgtgc ttctacagtt tgcttctgcc ggtcaccgta
      481 ccggtgtacg tgttcttcca cctgtggact tggatgggcc tgaagctctt cagacataac
      541 tagggtagct gaggccccgc ttgtgcacgg ggcaagaggc tcctggttgt tgggttctgc
      601 cctcaggtgt tgcagattct cctgttagtg ctgtagctga aaaacactta caataaatat
      661 gtcccaaggg agaggaacat gaccggtctt catccgaaga ctgttttttc taagatttat
      721 tcttaattat gtggatatga gtgtgggtcc ccaaagaggc cacacgaggg ttggaggtac
      781 gagcaactgt aagactgccg gagctttact cagatcctct gcaagggcaa gcaagttcat
      841 gtccttaacc cctgagcatc tctccacctg cctgtttcct cccttccctt agttctggct
      901 aacctcaaac tgtgagaggc agaccttgac ctccttacct tcctgtctct acctcctgag
      961 tgctgaagtt ataggcaagc attgccgcat gtgtttatgt ggtctggcag aacccaggtc
     1021 gtgaacgcta agtcggcact ctgccagcca accaccctga ggactgtgtt gttgttgttg
     1081 ttgttttgag tccattcatt taaaagtccg tcatttggaa gccgagcagt ggtggcactc
     1141 acctttactc ccagcactcg ggagacagag gtggatctct tgagtttggg ccagcacaac
     1201 gagactgtaa aaataataat ttgggatttt gtttcagctt caaggtcagt ggtgaggtgt
     1261 tggatctgct gagacaaggg tttcagatgg ttgggaacta ctgtgtgggt gctgaagaaa
     1321 atccagtgct cagggatgac tcctttgagg agctgagtgg tccgtaggtt ggtggctcac
     1381 aactgcctgt atttccagtt ccagaggctc tgactccctc tgctggactc tgggtacctg
     1441 cacacctgtg acatgtctat tcattcacac acattaataa atttattttt aagagggaaa
     1501 aaaa
//
