LOCUS       NM_024144               3698 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus phosphatidylinositol glycan anchor biosynthesis,
            class M (Pigm), mRNA.
ACCESSION   NM_024144
VERSION     NM_024144.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Maeda,Y., Watanabe,R., Harris,C.L., Hong,Y., Ohishi,K.,
            Kinoshita,K. and Kinoshita,T.
  TITLE     PIG-M transfers the first mannose to glycosylphosphatidylinositol
            on the lumenal side of the ER
  JOURNAL   EMBO J 20 (1-2), 250-261 (2001)
   PUBMED   11226175
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On Nov 26, 2020 this sequence version replaced NM_024144.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AB028126.1, SRR26643429.45358.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3698              JAXUCZ010000013.1  87370693-87374390
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..3698
                     /gene="Pigm"
                     /gene_synonym="GPI-MT-I"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class M"
                     /db_xref="GeneID:79112"
                     /db_xref="RGD:71041"
     exon            1..3698
                     /gene="Pigm"
                     /gene_synonym="GPI-MT-I"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..1358
                     /gene="Pigm"
                     /gene_synonym="GPI-MT-I"
                     /EC_number="2.4.1.-"
                     /note="phosphatidylinositol glycan, class M; GPI
                     mannosyltransferase I; phosphatidylinositol-glycan
                     biosynthesis class M protein; PIG-M mRNA for
                     mannosyltransferase"
                     /codon_start=1
                     /product="GPI mannosyltransferase 1"
                     /protein_id="NP_077058.1"
                     /db_xref="GeneID:79112"
                     /db_xref="RGD:71041"
                     /translation="MSYTKHWGEWFLNLRVPPAGVFGVAFLARVALVFYGVFQDRTLL
                     VRYTDIDYHVFTDAARFVTEGRSPYLRATYRYTPLLSWLLTPNVYLSELFGKFLFISC
                     DLLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRGNADSIVASLVLTTLYL
                     IEKRLIACAAVFYGFAVHMKMYPVTYILPIALHLRPERDSDEGLRLARYSFQARLYDF
                     LKRLCSWAVLLFVAIAGLTFLALSFGFYYKYGWEFLEHTYLYHLTRRDIRHNFSPYFY
                     MLYLTAESKWSFTLGIAAFLPQFILLSAASFAYYRDLVFCCFLHTSIFVTFNKVCTSQ
                     YFLWYLCLLPLVMPLVRMPWKRAVVLLMLWFIGQALWLAPAYVLEFQGKNTFLFIWLA
                     GLFFLLINCSILIQIISHYKEDRLTERIKYD"
ORIGIN      
        1 gtgggcgagt ggagtgagcc ggaggagggt tagagagagg ggcgcagcgt ggacccgggg
       61 ccgggccggt ggcccgcact cagaccatga gctacaccaa gcactgggga gaatggttcc
      121 tgaacctgcg ggtgccgccc gccggggtgt tcggcgtggc cttcctggcc cgggtcgccc
      181 tggttttcta cggtgtcttt caggaccgga ctctgctcgt gaggtacacc gacatagact
      241 accacgtgtt cacggacgcc gcgcgtttcg tcacggaggg gcgctcccct tacctgaggg
      301 cgacgtatcg ctacacgccg ctcctgagtt ggctcctcac tcccaacgtc tacctcagcg
      361 aactctttgg caagtttctc ttcatcagct gcgacctcct caccgccttc ctcttgtacc
      421 gcctgctgct gctcaagggg ctggggcgcc gccaggcctg tggctactgc gtcttctggc
      481 tgcttaaccc cttacccatg gcggtgtcca gccgaggcaa cgcagactcc atcgtcgcct
      541 ccctggtgct tacgaccctg tacttaatag agaaacgact catcgcgtgt gccgcggtgt
      601 tctatggctt cgcggtgcac atgaagatgt atccggtgac ctacatcctc cccatagcgc
      661 tccatttgcg tcccgagcgc gacagtgacg aggggctccg gctagcccgg tactctttcc
      721 aggctcgttt gtacgacttc ctgaagaggc tgtgtagctg ggctgtgctg cttttcgtag
      781 caattgcagg actcactttt ttggccctga gcttcggttt ttactataag tacggttggg
      841 agtttctgga gcacacctac ctttatcacc tgactcggag ggatatccgc cataactttt
      901 ctccatattt ctatatgctg tatctgactg cagagagcaa gtggagtttc acgctgggga
      961 tcgctgcgtt cctgccacag ttcatcttgc tttcagccgc gtcttttgcc tattacagag
     1021 accttgtctt ctgttgtttt cttcatacat ccatttttgt gacttttaac aaagtctgca
     1081 cttctcagta ctttctttgg tacctctgcc ttctgcctct ggtgatgcca ctagtgagga
     1141 tgccttggaa gagagccgtg gtcctcttaa tgttgtggtt cataggacag gccttatggc
     1201 tggctcctgc atacgttcta gagtttcaag gaaagaacac cttcctgttt atttggttag
     1261 ctggtttgtt cttccttctg atcaactgtt ctatactgat tcagattatt tcccattaca
     1321 aggaggaccg cctaaccgag agaatcaaat acgactaatg tgtctggatc ttctgtagca
     1381 ttctgatgat tccatgtgga ctagaaaagc tttgtaattt ttttcctccc tgagcactct
     1441 aagcactcta gtgaaagttt ccttgttcca atagaaatta aaaccggtgt tggccttaca
     1501 tataaagggg accaataact gaggtccatc ctttagaagt cttaggactc ttgtttgttt
     1561 gttgagaagt aaatctttgt ttgactgctg aaaagctggt gaagctagaa gatgctgaaa
     1621 tatttttgaa cagtagagga atagacataa ggtctctgtc agtttgttcc tgtcactgtg
     1681 ctactgttgt accttcagcc cctgcctttt ttttccctgc agttctgaca gctatggaca
     1741 tttacaaagt tcctaaagta caccattttt acatataaag tattaacagt tccatgctca
     1801 gttgggaaag ctttaaattt ttgcattaaa tgtgggggct tagaagagaa ctaatccaaa
     1861 gaatttaaat tgtgatcatg tatttgtttt gtaatttagt ttttcagcat tagtaccagt
     1921 gatattcgtt ttatacaaaa agattaaatt taaactcctc catctttaga cctgagttta
     1981 aacaaaagaa attggacatt agcatgtata tgcttgccct ttttctaatt cctagaaaga
     2041 tttttcttct agagtttaat ttgagtattg tctgttgtaa aagtagtaga ctttagatgg
     2101 taaagccaaa gttttgggta tgacgtcatt tgctctattc tggctttatc gtctaaattg
     2161 ttacaatagt gaacattgtt gataaggcat aaatcctaca ctctgaaaat cccctgatag
     2221 aaaggatgat ttttgaggaa gactcctgtg aagcataagt ggtgtcattg tttgggctca
     2281 ctgctctaga tcaagaggtt gcaagggact tgaggaacta cagaaatgag gctgtggtag
     2341 gcagatcttt ttatgtatca ctagaagtaa atacagtgat agggaaatac tttctcaact
     2401 gtatgaataa acattctaaa atttttttag aaaacataga gcccatctat gttgagggct
     2461 ttctaacatt tgaagatgta gcagaaatag ataattatga ttttgtgatc atgatttttt
     2521 ttttcaaaaa aaaaattgtt ttttttccag agtcaacaac aacaaaaaac tcctgaaaaa
     2581 taaatactgc tccagaaaag tagtaatttt tttcctgtta gggcaagcct aaaaaagcct
     2641 ttgttgataa aatatttagg gctgctcata attaaaaatt ctattgtggc agcatttctt
     2701 tgctggattc cttttgggat tggccttaga agaaaaggct ttctgttgct tactgtgtga
     2761 agaaaagtgg tcaattgtag aaaacaatgg cctttcctaa aatgtcaaaa cccatccttt
     2821 ttattagctc ataacagcat actgcttaag acagtttaag tagtagcttt ccactttatg
     2881 gcacatgaac cttttaaaat tattatgggg attgaaacta gggcctcaaa ctttctaggc
     2941 aagtagtctg tctaccactg agcaatgtat ccagccccaa gtgaaatttt gaaatgaaaa
     3001 tttgagcaag gaaagtatat tcgtgtattt gtataggcct ggcttttctt gctcttttaa
     3061 acagtccagg ctggtcttaa actttctttg tttgcccaag ataaacttga actcctgacc
     3121 ttcaggcctc tacctcctaa gagctgagat tacagtcctg tgccattgtg cctggctcag
     3181 aaaatctcta ttaaagaaac gaaagtattt cctaagagat gcagatgttt tgcagttaat
     3241 ctgctgcaaa cctttatttt tttatttgct ttatatgtat aggtattttg catatatgtc
     3301 tgtgcaccgt gtgcattcct agtgcacaag gtggccagaa gagaacattg gctatactag
     3361 aacagatggt tttgagccac gatgttggtg ggtgctagga atccaacctg agagtcttct
     3421 ggaagagctg ctagcactct taaccactga gccaactctc aagccccctg ctgcaaaaac
     3481 attcagtaag ttaagtggag aaatgacttg atctttttgg ggtttacttc tgtttcgcaa
     3541 cttttaaaag ttttatttag agaagaggca cacattccat gtcctgtgta tggaggtcag
     3601 atgcaacata ggacaactgg tggtggtcga ttttcctctt tctcttatgc taaccctggg
     3661 atcaaacttg gggcatcagt cgtggcagca gtaccttc
//
