LOCUS       XM_006240265            9084 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phosphatidylinositol glycan anchor
            biosynthesis, class H (Pigh), transcript variant X1, mRNA.
ACCESSION   XM_006240265
VERSION     XM_006240265.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006240265.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9084
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9084
                     /gene="Pigh"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class H; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 ESTs, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     19 samples with support for all annotated introns"
                     /db_xref="GeneID:362756"
                     /db_xref="RGD:1311438"
     CDS             77..925
                     /gene="Pigh"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit H isoform X1"
                     /protein_id="XP_006240327.2"
                     /db_xref="GeneID:362756"
                     /db_xref="RGD:1311438"
                     /translation="MEDEKSFSDICGGRLALRRRYYSPYCREFGLSSARLSLWSLTAV
                     TCTVWLAAYGLFTLCENSMILSAAIFITILGLLGYLHFVKIDQETLLIIDSLGIQMTS
                     SYASGKESTTFIEMNKVKDIIINEAIYMQKVIYYLCILLKDPGKPHEISQVVPVFQEK
                     HWQARKGTQTLENHPEGPRRWKGLQTGGQKRAWCHRLRHQPLELCSSYLNSECQPCPK
                     WGWKVRRYIWNAACDLLQTIHTDDYNYEDHRAAQAGLPPGLALNLCQLCLSSPNAEII
                     GVCHHT"
ORIGIN      
        1 cggaacagtc gggagcctgc gagacttcca gcctctgtgt aggctagagc ggcacgacgg
       61 gccggcgtgt gcggccatgg aggacgagaa gagcttctcc gatatctgcg gcggccgcct
      121 ggccctgcgg cgccgctact attcaccgta ctgccgcgaa ttcggcctca gctcggctcg
      181 gctgtcgctg tggtcgctca ccgctgtcac ctgtacggtg tggctggcgg cctacgggct
      241 cttcaccctg tgcgagaata gcatgatcct ctctgccgcc atcttcatca ctatcttagg
      301 cctgcttggt tacctccact ttgtgaagat tgatcaggag actctattaa tcatcgactc
      361 acttggcatc cagatgactt cgtcctatgc atcgggcaaa gaaagtacca ccttcataga
      421 gatgaacaag gtcaaggata ttatcattaa tgaggctatt tacatgcaga aggtcattta
      481 ctacctctgc attttactga aggatccagg gaaaccacat gagatatccc aagtagtgcc
      541 tgtcttccag gagaagcact ggcaagcccg taaaggaaca cagacattag agaaccatcc
      601 tgaaggtcct agaagatgga agggcttaca gactggagga cagaagaggg cttggtgtca
      661 ccggctcagg catcagcccc ttgaactttg ttcaagttat ttaaactctg aatgtcaacc
      721 ctgtcctaag tggggatgga aagtacgcag atacatctgg aatgctgctt gtgacttgct
      781 gcagacaatt cacactgatg actataacta tgaagaccac cgtgcagccc aggctggcct
      841 gccacccgga ctggccttga acttgtgcca actctgcctt agctctccaa atgctgagat
      901 tataggtgtg tgccaccaca cctgactgca tctgtaggag ccatggatac ccctggcaga
      961 gagccttcta tatgaaagac gaaggggagc cattcaaatg catgcccatg cacataccct
     1021 ggatggcggc aggaagggag ttgtgttctt caaatacaca gaaataaact gaagcaccaa
     1081 agcaacttga ccaagttctc atattggagg gaggccggga cataagccca ggctttcagt
     1141 tccctgttgt ctcccctgca cacagcatcc atgtgcagtg agtaaggagg tcactgcctc
     1201 cgtacaacag agcccctccc tgctgcccca ggatctgcag tcttccatca ggtttcatgg
     1261 tgttttcaac aggaagaaac ctacctgtgc catcaaggca gccatttcga gggccagttc
     1321 cttggtgact ggaaatcttc ctgccactat ttcgccactg gtttggaagg caagtagcag
     1381 ccgctctctc tctgtctccc cttttacttg acttcgaaag tatagcctat agtgaagaca
     1441 gtgaaaaacc agatctcagc tggcaccctg aacaaaaata aggctttccc tgactctttc
     1501 tcttgacccc tcaagtgagg ataactgttt acaccatttg taagcctctt ttctactacc
     1561 cacgaaattt gtagccaagc ctaacctaga tgtgggcatg caggtctcac gcagaggaac
     1621 agatggttag tcctgaacac accaccacta cacatggact ttgcatgaag attatggtac
     1681 ctctacacag tttattagag gtctggatga actaagactc ccaagagact aatggaaaat
     1741 atttgcctag aggcatactg ggacaaatgt ctcttactta aattggtaga aagtacctgt
     1801 gtgtgtcctg aagttgatat acgggaaatt tttattcctt agctttaaat atttcgtgct
     1861 tattcaaatc tgtactctca gagggtaatg tacagcatcc cctggcctca gtatgctttt
     1921 gtggcacgta tgcatacata cccgtgtgca catggcagtc tagagagtgc caacagaaca
     1981 cctgtactgt caccatctcc tgagggagcg atcagaagcc ctcatgccca ccccaccctc
     2041 agcagctctc aggacctgtt cttgtacatc agcttcacaa ctcgtgtccc accctcagac
     2101 tttccgggat gcagctcctt cagcgtttgc tcccacttgg agatggcatc gcagatctta
     2161 aagaggaaaa gaggagtgtc agcaaggccc cggggctggg gtggggatga ggtccggcca
     2221 agccgagtga cgctctgctt tagacggctg ccctgtgagg tctcaggctg caaggatggg
     2281 aagtgcctac caattccctt tcagataagg agctggagag caccatggat gtagttagca
     2341 ctgcaagaaa tgatcactgc caaactggct ttgtgaagac tagcatctga gggaccagac
     2401 taggcaggcc ccagtcaaag tccatggcat cgtggctcca tttttatttc actcaccaca
     2461 ttcccctttc aataaataca cccaaagcct gctctgacca aagccttaca gatacccata
     2521 catttactag gagggtatgt ggcagttttt ccatgcactg ttaaagacta gccctttgtt
     2581 ccaggataag gaagaaagca gatgctggag ccagatgcgc ccatccattc ctacaaacac
     2641 ttaacacccc agaccactga acagaccaac cgaggacccc gccccaaact cagcatccat
     2701 gagcatctgt ctgtaagcat gggcagacag aggaaaagct aggtgatagt cccaccccct
     2761 ggttgtcagc acagctgctg acctaagagg gcagacagca tggggacaag cttggccgag
     2821 ctccctcatc tttaccctgg gctaagaggc tctgccccgg atgctgcaca gtcctgtgag
     2881 ggagacagga ctgtgaggat ttgtctccag ggtcgaggcc tgcatagata atacatttta
     2941 ggatgtcact gaaatgttgg cctggagata gcatcttggt ttcagtgcca ctcagggctc
     3001 tgaagagtta ggcgcgcaca cgggacgggc tctgacccac cacctgtatc tctgagctaa
     3061 gaggaagagt gggacgttta ccttgacacg cccttggaga cagtgctcca ggtccctgcc
     3121 cgaaggatca tctgtgaaga gggcaaagcc agactgggat ggctttctca tgcctgtctc
     3181 ctggttcagc cgctggagga actcatcaac tgtggaggag ccatcaaaac caaccacctg
     3241 gggatgggga gaggaaccct gaaccagcaa acctcctgag gaactgtcac aggggatcac
     3301 ggaagggtct gaacacagcg tggagaggta caagggtggg ggcaagatgt caaagccaca
     3361 tcccattcag aagaacctga gcctgcccac taaactggaa ccggacagag gcctagttac
     3421 tcttttgtag tcagtattct gggagtttta tctcaggctt ttctggtcca atgtctcagc
     3481 ttccctgttc ccatgatggg ttcaggagac ctaactgcaa ggcaccaagt agttccatac
     3541 tttggattca aactcgtttc tcctttcaca cactatacta cgaatgccat tcccacctcg
     3601 aatctaggct aaatctgaaa gcctacaagg tttagcagca gccagaagtg ttctctggac
     3661 agtgatatgg acagacctgg gacaggcacg tgctcaacct cctacctggt aagtcccatt
     3721 ggcaaagtgc acagggatgc tgaagggcaa ggagtgatgg aaggggttcc gaagcaagat
     3781 ggacaccact tccatccgcg atggtctggc ctcccgttct cctgtctgca gggttcgctc
     3841 cacggctcgc tggcagtata tggcatactg accagtttca cttctgaaaa cagaaggaaa
     3901 tattgggaat tccttcctct tggcaccctg tggtatatac cacaccgagc caggataaaa
     3961 gctaactgga ctggttgtgt ggacctgaaa actagcatgg gatgtcatta catttttatt
     4021 tggggaggga gtacacttgt ggaggttaga ggataacttg tgggagctgt tctctcctac
     4081 cgtgtgggtc ctgggagtcg tcagccttgg cagcaaatct cctttaccta ctgagccccc
     4141 tcacctggtg catttgtcac tgtggaccta ttattcgcag cacatggctg ccatggctgg
     4201 ctggctggct ggctggctgg ctggctggct tccttccttc cttccttcct tccttccttc
     4261 cttccttcct tcctttcctt cttgcaggat atttgatcac attgtgaacc ccaagattgt
     4321 gctatttact gtaaagcctt gtttctagtg gtggcttagc ccttagcacc agcctttaat
     4381 ccttcttgat ggaatatagg cacacccttt gcacacacct ttaatcgcaa acaatgaagg
     4441 taaagttaat ttgtataagg aagcacccag gcttgaaagt gatgtctaac tgagtggcag
     4501 acatgacaca tcagaatagg atatgcccag ctctcaggag aagagagagg aaagagaagc
     4561 cactggagag agcagtgcag agaggaagag gaggaggcga ttttacaggg agtttcacag
     4621 agacaggttg cagtgagaga acaagctaga cacgggtgaa gacagaatga gccagagaac
     4681 gagaaggagc cagaggacta gaacgtattc ccaaagtcaa gcaattcagg agaggcaggg
     4741 agagagaagc cagactgaat cagtcagctt ggagaggagt tagagccaga atggccaatg
     4801 tgaaccaacc agccagagct cagaaggagc taggaagggg tgagtgtatt ctgtagcaac
     4861 tttcagaggc tgaaaacatt ccaggcctag aaaagatggc aaggaggcta gaagcttcca
     4921 ggactaggcc taggttagct gacagaggca gcaagcctgg gagatgacag tcacttcagg
     4981 caaataaaag atactattac ctttcctccc tccctccacc ccttcttaaa acctatacta
     5041 gggatctaag ccagggcctg gtgtctgccc tagctgagct cttccctacc cctatactcg
     5101 ggtattttct tacagccaga agaagaggaa ataaacattt ggggataatg tgggatagca
     5161 tggccattcc atgagaatgt cccccaaata cccaagcaca cagagattgg tgttcaaagc
     5221 taaagtctcc acctgctcag gtgtacacag tgagtctctc aaccctgagc agctctgagg
     5281 ggagatgcag ttagttcaac ctcttcctcc ccctcatccc tttgaatcat gcctgtcaat
     5341 agtgtggtag tgacagagag aatgctctca ctcacctggg atctgcatgg cgttgaagct
     5401 gctgtttgac ataccagagg aagtggtgct gaggcaggaa gagtggggca cacagagcca
     5461 ggagctgcca gcactgccat ggaacaggca gtgtggtcag tggtgggttc ctgccattgc
     5521 agttttgagc tacagaacct acactgtttt cccccaacca gaacctcaac ccccctgaca
     5581 ggcactggga tagctgcctt ggccaggcat tgcccagaat ggtagtcaca ctgtgagcac
     5641 gcacacatca ggcaaccatg ctcaagcaac ttgctgcaca gaagctgccc actgtttagg
     5701 acgggagaac acctgcccag gcacctgctc cctccttctc taccccctaa ccagctctta
     5761 caaatggctc cagccagtta aatcccagcg catgctcacc tgcatgagag agtacttctg
     5821 aggtgggcgg cgactgatct gcttcatgag ctggcagtag atctcactct gtagctcggg
     5881 gtgaacgagg cagacctgca gtgctgtctg agccagcgac acgtggtagt ccaccgaggc
     5941 ggcttccact ggcacattga tgaagagctg gcaggactgg aaggagggtg gcggtgggtt
     6001 attcttgtga catgcaatgg tacttcagag cctcaagact cgagttcact aatgaccagc
     6061 cttctccaga gggagcgact gtttctgcat gtgaggctga aaggggctac ttactgtagg
     6121 gtcagaatta catacacctt ctttaaatgc ttctattaca taagtttgcc attaccagac
     6181 agggtagcac aatgtagctc agactggcat ttaactccaa gtcctgcctc tgcctcctgg
     6241 gatggatttt gagcatttag caccacacta gccccttagc aaattctttt ttttttttag
     6301 gccagaatat gcgaatggac acagagactg taaactaggt caggtctctg gtgtccagag
     6361 tagtgcaaac tggcccttct attgttactt gaggttggtg gcagctcctc aagggagagc
     6421 ttttgctggt aattcctaga gccccagagc ttcttcctgg gttgcagaag ggttatgttc
     6481 ctgccgtaaa ggagccataa agggaaccat gtgggacttt ctcttcctcc ccacaaccct
     6541 ggggccaccc tgtaagcaga gttctcctgt gctgtgatgg ggtcaagttg tgccaggctg
     6601 agcttgggca cccaaatcac caggctccac tcccatatta ccttgaagag cttgagggcc
     6661 tccgtctgta gagcctcgga gggcagcgtg gtgagggaag cacacagccc ttcttgactg
     6721 tagcacagca tggggtgcct ccagagcggg gagtctgcac aaagcatgga ccagagagca
     6781 atgcaatcac tacagggaaa actcacctcc tacctaccag tcccagctca gacttgcagg
     6841 gaagactgtg gcttaatgct atgggaaacg tgggttttgc tgggttgatc atctacaggc
     6901 tggaggccat gtcagtgttt tgcaagttgc acactcccat acagctaagg aggaaggcgg
     6961 ccaaagcact gccgaggagc cgcaaaggtt aagtgaacac agctgtgagt acacacacgc
     7021 agggacagcc ttccctccag tttcaggctg gaggaacaga tgcgtcagcc tgaaacacac
     7081 ctaccctgag agcagtagaa aagacacctc aggttggtcc acgaggaccc tgaggattag
     7141 tagcaaaata aggactccca acatcccagg cttgggttgg tctgatccaa attgaagctt
     7201 cacttattaa caaactcaac tgtagattaa ccagctgcct cccactcgac cccctacccc
     7261 catgtcttct gcatagctag caaagctacc gattaaacag agtaaacatt cacctaggct
     7321 tctgggaagt ctgtttccca gacagactcc ctcacgcaca gtggtttcct cagtgttgtg
     7381 accagacatg gagagagcaa cactggagcg tgcgatggga cttccctcag gcacgctcag
     7441 cgcagcttat gtgtaacagt gctctctgct tctcttccga ttagagccct gccaggtccc
     7501 tgctgcccag gcaccgatgg ccactccttc tttccttacc tgggttgccc tcaccgtcca
     7561 tcagtttccc aatgagctgc tcatagacag tgcccacctt ggcactgctg ccacctgcag
     7621 ccactgtgag gtggtaaagc catgtgtcct gggagatgac agaaaacact cagatgtaat
     7681 gtggtaggag gagggctttg gggcagggga tgcagctcag aaacagaaca ctcgtctaac
     7741 gtgtaaggct ctgggtttga ttctcaggct atgtgagacc ctgtcttggg gcgtgggtgt
     7801 gttgggggag gcgggctttc attagtttgg ctggcattaa gtcaagatca cccctccaaa
     7861 gagagagaca ggatcaggta aacccaagtt tcaaagtaga agctctgtca tggtgcatga
     7921 tgaagagacg gatgccggga ggaaatagaa cttgaatttg gaaagctcag gggagagaag
     7981 gggagtcaga acacaggtca agctcctccc ttaccttttc atgcttggtg cctatgagga
     8041 ggtaggtggg gctgtgctct ggtgggtgga tcaccagtgt gcagtgagag gacagcaagc
     8101 gtccagttcc tccagcctca tagtcttcgt ctgagtcgca ggatcgatct acttcctcta
     8161 tatgagcgtc ccgaacaggt aggcagccca ggggtctctg tggacatgag ccttccatga
     8221 ataggaaaac agatggagaa ggaagtctcc ttttcgaatg cttaggctgt gtggggctgg
     8281 agatcataca tgtggacaga aggcagttag gtgaggagac agaagaggca gcatggcaga
     8341 agactgcttt agaaagtcca gcggactaca tggccatgat gctggccgtg tgcccgggag
     8401 ggagctggac agccagtctt tgcatttgct gaaggtaagc tggggactgt gtcagtgaca
     8461 tgcagctatg cagcttggag gtggcactgt taggaagctc ataccttgtc ctcgtggctc
     8521 cggtagtagt agaaggtttt cccaacaagg gcacaccaga ccagcttgga gtggccatgc
     8581 tttacctgta agtaaagtga cttctctaga ccagggctgg ccaagacagg ccaagggaag
     8641 gttgccaaaa tcaggtctcc tctcacagtg aaactgctac attacgtaac ccagccactg
     8701 ccactgtcgg gccacccagg acctatgacc ggccagtgaa agattatcct ggaaatcaga
     8761 atattctagc tggcagaggc agagttgtaa ggatgcctcg caaggtaaaa aaagggcccc
     8821 tggtggtgtg aatcaccagg gaacagcaac tgcgctctca cacagaagaa cggaagaacg
     8881 gaagaacggc agactgactc atgggaagca gaggctcagg aaagtctgag caagcgcctg
     8941 ctggctgagc tcagccactg tccctaagtg ttcagcctgt taatgcgctc cctagttaac
     9001 tcccctttca tcccgacaca gctagttata ctgtgggggg ccacgactaa tgtcctaaac
     9061 atttagtaaa aacatttctt ttcc
//
