LOCUS       NM_001308432            1246 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus PIGB opposite strand 1 (Pigbos1), mRNA.
ACCESSION   NM_001308432
VERSION     NM_001308432.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Chu,Q., Martinez,T.F., Novak,S.W., Donaldson,C.J., Tan,D.,
            Vaughan,J.M., Chang,T., Diedrich,J.K., Andrade,L., Kim,A.,
            Zhang,T., Manor,U. and Saghatelian,A.
  TITLE     Regulation of the ER stress response by a mitochondrial
            microprotein
  JOURNAL   Nat Commun 10 (1), 4883 (2019)
   PUBMED   31653868
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments. The encoded protein is conserved
            in mammals but has not been functionally-validated.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1935235.1,
                                           SRR26643298.45253.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               JAXUCZ010000008.1  82656376-82656490
            116-1246            JAXUCZ010000008.1  82659615-82660745
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1246
                     /gene="Pigbos1"
                     /note="PIGB opposite strand 1"
                     /db_xref="GeneID:100909598"
                     /db_xref="RGD:6502569"
     exon            1..115
                     /gene="Pigbos1"
                     /inference="alignment:Splign:2.1.0"
     exon            116..1246
                     /gene="Pigbos1"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..344
                     /gene="Pigbos1"
                     /note="PIGB opposite strand protein 1 homolog"
                     /codon_start=1
                     /product="protein PIGBOS1"
                     /protein_id="NP_001295361.1"
                     /db_xref="GeneID:100909598"
                     /db_xref="RGD:6502569"
                     /translation="MLRRLTRPQLLFAAALGVAGGMYIYQPIFEQYSRDQKELKEKVK
                     ILQESEEKRS"
ORIGIN      
        1 aggagcaaat cttcctgact ggagttcagt gctggaaaag acaaaaaaat aaagactctg
       61 gatgctttac tgcgcctgac acctcgcaca gcgcccgctg aggaggcgct cggagttctg
      121 aagagatttg ctgtctgtgg aacctagtca cgctcagctg tgcgccactc gccgtagcaa
      181 tgctccggag attgacgcgt ccacaactgc tttttgctgc cgcccttgga gttgctggag
      241 gaatgtatat ttatcaacca atatttgaac agtattccag agatcagaag gaattaaaag
      301 aaaaggtgaa aattttgcaa gaatcagaag aaaagaggag ctaattctgc ataaactgaa
      361 attgttttca ttgcttaaag tcctgttgac atcacacatg gactattaat ctagcaagaa
      421 tttagtgtgt tttaaataaa tcatgggtaa tggatctaag ttatttatgg atgtaattct
      481 tcattggttt gttttggggc aagaactcac tatgtagcac aggctggccc caagctctaa
      541 gctgtccaac cataactttc tttctagcat ttgttttttt agacaggatc tgtctctgtg
      601 gccaatgctg gcttcaaaca tgcaatcctg ccactggtgg gattagagag tatcaccata
      661 tctagctcag aatgagatgc ttcattttta aaaatacttt ttagttatat gtaattgtgt
      721 gtgcacttct tgtggtttat gtacatgtga gtgcaagtgc ttgtgaggcc aaagttgtct
      781 tctagagccg gagtcacaga tggttgtgag ctgccatgcg ggtcctagga actaaatcct
      841 aggtcctctt cgagagcaac gagctcttaa gtgtggagcc atttctgcag ccccgacgtg
      901 ttcacgttaa tattcactca tgcattcgct atctcgtgtc ttcttttcag agtagggcaa
      961 aaatttccta ctgcataaat taatttagca tgtttaacaa ttagtgtgta cttttaagat
     1021 tccccttttt gagctggaga gatggctcag cagttaagag cactgtctgc tctttcagag
     1081 gtcctgagtt caattcccag cacccaattg atggcttata accatctgta actgtagtcc
     1141 catggtgatc tcccctggta tgcaggttca tgcagacaaa acattcatat acataaaata
     1201 atttttaatt ccctctacca tgtacaataa aaccacacaa atgtga
//
