LOCUS       NM_001106564             878 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus piercer of microtubule wall 1 (Pierce1), mRNA.
ACCESSION   NM_001106564 XM_001079079 XM_216027
VERSION     NM_001106564.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Zhang,C., Chang,C., Zhao,W., Gao,H., Wang,Q., Li,D., Zhang,F.,
            Zhang,S. and Xu,C.
  TITLE     The novel protein C9orf116 promotes rat liver cell line BRL-3A
            proliferation
  JOURNAL   PLoS One 12 (7), e0180607 (2017)
   PUBMED   28749992
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Sung,Y.H., Baek,I.J., Kim,Y.H., Gho,Y.S., Oh,S.P., Lee,Y.J. and
            Lee,H.W.
  TITLE     PIERCE1 is critical for specification of left-right asymmetry in
            mice
  JOURNAL   Sci Rep 6, 27932 (2016)
   PUBMED   27305836
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 878)
  AUTHORS   Sung,Y.H., Kim,H.J., Devkota,S., Roh,J., Lee,J., Rhee,K., Bahk,Y.Y.
            and Lee,H.W.
  TITLE     Pierce1, a novel p53 target gene contributing to the
            ultraviolet-induced DNA damage response
  JOURNAL   Cancer Res 70 (24), 10454-10463 (2010)
   PUBMED   21159655
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474001.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216027.4, XM_001079079.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BF561593.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..878
                     /gene="Pierce1"
                     /gene_synonym="RGD1306233"
                     /note="piercer of microtubule wall 1"
                     /db_xref="GeneID:296608"
                     /db_xref="RGD:1306233"
     exon            1..211
                     /gene="Pierce1"
                     /gene_synonym="RGD1306233"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..479
                     /gene="Pierce1"
                     /gene_synonym="RGD1306233"
                     /note="UPF0691 protein C9orf116 homolog"
                     /codon_start=1
                     /product="piercer of microtubule wall 1 protein"
                     /protein_id="NP_001100034.1"
                     /db_xref="GeneID:296608"
                     /db_xref="RGD:1306233"
                     /translation="MSEENPQECAEPVEPKAKPAPEKTSDYYRISEKLPDRFNNPGWF
                     HGYSTNEAVSMYRTSNQTYGSRAPTAHEMPKAYYPSSNKFSTQHAAFGMFRRHNMNVC
                     LDKSLVTGPDNHVTHYDPLNFHPSYNVNRPSICD"
     exon            212..290
                     /gene="Pierce1"
                     /gene_synonym="RGD1306233"
                     /inference="alignment:Splign:2.1.0"
     exon            291..878
                     /gene="Pierce1"
                     /gene_synonym="RGD1306233"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caacaggacg ccctgccgca gtagccacag acttgactgt cctgggctag tttcctgtgg
       61 gaggccaaat gtctgaagaa aacccccaag agtgcgccga gccggtggag cccaaggcta
      121 agcctgcccc agagaaaacg agcgactact accgcattag cgagaagctc ccagacaggt
      181 tcaacaaccc ggggtggttt catggctaca gtaccaatga agctgtttcc atgtacagga
      241 ccagtaacca aacctatggg agcagagctc ccacagcgca tgagatgccg aaagcatatt
      301 atccatcttc aaataagttt tccacacaac acgcagcttt cggaatgttc cggagacata
      361 atatgaatgt ctgcctggat aagagcctag tgactgggcc ggacaatcac gtcacccact
      421 acgacccctt aaactttcac cccagttaca atgtcaacag gccatccatc tgtgactaag
      481 gaagctggct gcctgtcgtc ggggctgtcc tgactcaggg ctgctgtagg gagcacggat
      541 gcccctgatt ctggacaagt gccccattct aaaggcacgg agctcactgc cttctcagaa
      601 aacacttttc ctttccagag gagaaaatta tgtaaatagg gccataatgt cttgtgttct
      661 gcatttcaca caggaaggat gctgacagaa tctttgtttt attaaaaagt tgccacggct
      721 tcaatttctg tcgtgcttca tatttgtcct gaagtagcag gggacccgca catcttggaa
      781 cccgagtctt ggtttgcaat gtggggtgtt ctagggagtg ccacaaagca tctttatttg
      841 ggagctgttg ccatgtgtgt gactgttact gggataaa
//
