LOCUS       XM_224451               2646 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus progesterone immunomodulatory binding
            factor 1 (Pibf1), transcript variant X2, mRNA.
ACCESSION   XM_224451
VERSION     XM_224451.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_224451.10.
            
            On Jan 21, 2021 this sequence version replaced XM_224451.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2646
                     /gene="Pibf1"
                     /gene_synonym="RGD1305077"
                     /note="progesterone immunomodulatory binding factor 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 ESTs, 1 long SRA read, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 40 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:306104"
                     /db_xref="RGD:1305077"
     CDS             57..2330
                     /gene="Pibf1"
                     /gene_synonym="RGD1305077"
                     /codon_start=1
                     /product="progesterone-induced-blocking factor 1 isoform
                     X1"
                     /protein_id="XP_224451.3"
                     /db_xref="GeneID:306104"
                     /db_xref="RGD:1305077"
                     /translation="MSRKIAKESKKVNISSSLESEDISLETTIHTDDVSSSEEREGKV
                     KITRQLIERKEILHNIQLLKIELSQKNMMIDNLKMDYLTKVEELEEKLNDALHQKQLL
                     TLRLDNQLTIQQKDAKKYQELMKQEMETILLRQKQLEETNHQLREKAGDVRRNLRDLE
                     LTEEQYEKLKSFPEDQLSIPEFVSIRFYELVNPLRKEIHELQVKKNELSEELSTNKGQ
                     LKQLTETYEEARRNHSELLTRCQRLALELADTKQLVQQGDYRQENYDKVKSERDALEQ
                     EVLEVRRKHEVLETSHIAQAKERNELSKEVSTLQQTVTLLQKDKEYLNRQNMELSVRC
                     AHEEDRLERLQVQLEETKRAREEMYEKYVTSRDHYKTEYENKLHDELEQIKLKTNLEI
                     DQLRSASREMYERENRNLREARDNALAEKNRAVTAEKDALEKHEQLLDRYRELQLSTE
                     SKVSEFLHQSKLKSFESERVQLLQEETARNLTQCQLECEKYQKKLEVLTKEFYSLQAS
                     SEKRITELEAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILYSYGYGANV
                     PTTAKRRLKQSVHLARRVLQLEKQNSSILKDLDHQKEEVRQLSQELDRANSLLNQSQQ
                     PYRYLIESVRQRDSKIDSLMKCTAQLEKDVSNLNKEKSALLQTKNQMALDLEQLLNHR
                     EEFAAMKQIIINMCSKHSENNLLLTKVESKSVTENQASRPLTMPREHEENVFIPKPTL
                     FTKKEAQEWPKNQKMKA"
ORIGIN      
        1 ctcccagcct gcaccgcttc cgactgactt ccgggagagg aagattgatt caaataatgt
       61 ctcgaaaaat tgccaaggaa tcaaaaaaag ttaatatctc tagttctctg gaatctgaag
      121 atattagttt agaaacaacc attcacacag atgatgtttc ctcatcagaa gagcgagagg
      181 gtaaagtcaa aatcaccagg cagttaatcg aaagaaaaga gatacttcat aatattcagt
      241 tactgaaaat cgagctatcc caaaaaaata tgatgattga caacttaaaa atggattatc
      301 ttacaaaggt tgaagagctg gaggaaaaac ttaatgatgc ccttcaccag aagcagctgc
      361 taactttgag attagacaat caattgacta ttcaacagaa agacgccaaa aaatatcaag
      421 aactaatgaa acaagaaatg gagaccattt tgttgagaca gaagcaactg gaagagacaa
      481 atcatcagct aagagaaaag gctggcgatg tccgtcggaa tcttcgagac ttggagctaa
      541 cggaagagca gtatgagaag ctaaaatctt ttcctgaaga tcagctttct attcctgaat
      601 ttgtctctat tcggttctat gagctagtaa acccattaag aaaggaaatc catgaactac
      661 aggtgaagaa gaatgaacta tctgaagagt taagtacaaa taaaggccaa ctgaagcagc
      721 tgacggagac atatgaagaa gctcgaagga accactctga acttctaact cgatgtcaac
      781 gtttggcctt agaattagca gacacgaaac agttagttca gcaaggagat taccgtcaag
      841 agaactatga caaagtgaag agtgaacgcg atgctctcga acaggaagta ctcgaggtta
      901 gaaggaaaca tgaggtactt gaaacctctc acatagctca agctaaagaa aggaatgaat
      961 tatcgaaaga ggtaagcacc ttgcagcaga cagtcaccct gctgcagaaa gataaagaat
     1021 acctcaatcg ccaaaacatg gagctcagtg tacgctgtgc ccatgaggag gatcgcctgg
     1081 aaaggttgca agttcaactg gaagagacca aaagggctag agaagagatg tatgagaaat
     1141 atgtcacatc cagagaccat tataaaacag aatatgaaaa taaactacat gatgaactgg
     1201 aacaaatcaa attgaaaact aatctagaaa ttgatcagct tcgaagtgct tctagggaaa
     1261 tgtatgaacg agaaaacaga aatctccgtg aagcaagaga taatgctctc gctgaaaaga
     1321 accgagcagt gacagcggaa aaagacgctc tagaaaagca tgagcagctc ctagacaggt
     1381 acagagaact ccaacttagt acagaaagca aagtttccga gtttctccat cagagcaagc
     1441 tgaagtcctt tgaaagcgag cgtgttcaac tcctgcaaga ggaaacggca agaaatctca
     1501 cacagtgcca gttggaatgt gaaaaatatc agaagaaatt ggaggtttta actaaagaat
     1561 tttatagtct ccaagcgtct tctgaaaaac gcattactga actcgaggca cagaactcag
     1621 agcatcaggc aaggttagac atttacgaga aattggaaaa ggaacttgat gaaataataa
     1681 tgcagacagc agaaattgaa aatgaagacg aggctgaaag aattctttat tcctatggct
     1741 atggtgctaa cgttcccaca acagctaaga ggcggctaaa gcaaagtgtc cacttggcaa
     1801 gaagagttct tcaattagaa aaacaaaatt catcaatttt aaaagatctg gaccatcaaa
     1861 aggaggaagt aagacagctt tctcaagagc ttgacagagc caattcactg ttaaatcaga
     1921 gtcagcaacc ctacagatac ctcatagagt ctgtgagaca gagggattcc aagattgact
     1981 cactgatgaa gtgtactgct caacttgaga aagatgtcag caacttaaat aaagaaaagt
     2041 cagccctgct gcagacgaag aaccagatgg cactggattt ggagcagctt ctaaatcacc
     2101 gtgaggaatt tgcagctatg aagcagatca tcattaatat gtgtagtaaa cattctgaga
     2161 acaacttact tcttacaaaa gtggaatcaa aaagtgtgac agaaaaccaa gcatcaaggc
     2221 ctttgactat gccaagagaa catgaagaga atgtatttat acccaagcca acgctgttta
     2281 ctaaaaagga agcacaagaa tggcccaaga atcaaaagat gaaggcctag tgtttggggt
     2341 tgaagagagc tagcgcctaa cccagctggg cccctccgtc ctcaccgcac ccccagccag
     2401 gcctccggct ctccactgga gtgggcctgt gttatcatgg actcctgaag tgctatgttt
     2461 gttgaggaga aaggttcatt ttaatcatgt acttgatatt ttcaaatata cataacttaa
     2521 tgtttgtttt aactaatgtt aaattaacaa atttcagtat aatcaacata taaagtacaa
     2581 atcgtcatat actttatatg tggctttata tattttatta taaaataaat gtcttctatc
     2641 tcctga
//
