LOCUS       NM_001014059            2456 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus PILR alpha associated neural protein (Pianp),
            mRNA.
ACCESSION   NM_001014059 XM_232352
VERSION     NM_001014059.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Geraud,C., Schledzewski,K., Demory,A., Klein,D., Kaus,M., Peyre,F.,
            Sticht,C., Evdokimov,K., Lu,S., Schmieder,A. and Goerdt,S.
  TITLE     Liver sinusoidal endothelium: a microenvironment-dependent
            differentiation program in rat including the novel junctional
            protein liver endothelial differentiation-associated protein-1
  JOURNAL   Hepatology 52 (1), 313-326 (2010)
   PUBMED   20578158
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085924.1.
            
            On Apr 20, 2005 this sequence version replaced XM_232352.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085924.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2456
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /note="PILR alpha associated neural protein"
                     /db_xref="GeneID:312711"
                     /db_xref="RGD:1304952"
     exon            1..78
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /inference="alignment:Splign:2.1.0"
     exon            79..138
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..952
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /note="paired immunoglobin-like type 2
                     receptor-associating neural protein; PILR-associating
                     neural protein; liver endothelial
                     differentiation-associated protein-1; uncharacterized
                     protein C12orf53 homolog"
                     /codon_start=1
                     /product="PILR alpha-associated neural protein precursor"
                     /protein_id="NP_001014081.1"
                     /db_xref="GeneID:312711"
                     /db_xref="RGD:1304952"
                     /translation="MWPAQLLSQLLPLWPLLLLPLSLPAQGSSHRSPPAPARPPCVRG
                     GPSAPRHVCVWERAPPPSRSPRVPRSRRQVLPGTAPPATPSGFEEGPPSSQYPWAIVW
                     GPTVSREDGGDPNSVNPGFLPLDYGFAAPHGLATPHPNSDSMRDDGDGLILGETPATL
                     RPFLFGGRGEGVDPQLYVTITISIIIVLVATGIIFKFCWDRSQKRRRPSGQQGALRQE
                     ESQQPLTDLSPAGVTVLGAFGDSPTPTPDHEEPRGGPRPGMPQPKGAPAFQLNR"
     exon            139..644
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /inference="alignment:Splign:2.1.0"
     exon            645..726
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /inference="alignment:Splign:2.1.0"
     exon            727..2433
                     /gene="Pianp"
                     /gene_synonym="leda-1; PANP; RGD1304952"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccacccgctt ctgcgacccc ccagccccac gcagctccga gcgcctgcag tcgtctcgcc
       61 gccacaccag gcatgcagta aaggccaaaa atctgggtca cagctgagga agacctcaga
      121 tccagagtac agaatgtggc ctgctcaact gctgtcccaa ctcctccctc tctggccact
      181 gctgttgcta cccctatcac tgcctgctca gggctcctcc catcgatccc ccccagcccc
      241 agcccgtccc ccctgcgtcc ggggtgggcc ctcagcccct cgccacgtgt gtgtttggga
      301 gcgggcgcct ccaccaagcc gatccccacg ggtcccaaga tcacgtcggc aagttctgcc
      361 aggcactgca ccccctgcta ctccatcagg ctttgaggag gggcctccct cctctcagta
      421 cccttgggcc atagtgtggg gtcccacagt atctcgggag gatggagggg accccaactc
      481 tgtcaatcct ggatttctgc ccctggacta tggttttgca gccccacatg ggctggctac
      541 tccgcacccc aactcagact ccatgcggga tgatggagac gggctcatcc ttggggaaac
      601 acctgccacc ttgaggccct tcctgtttgg agggcgcgga gaaggtgtgg accctcagct
      661 ttacgtgaca attaccatat ccatcatcat tgttcttgtg gcgactggca tcatcttcaa
      721 gttctgctgg gaccgtagcc agaagcggcg caggccctca gggcagcaag gtgccctgag
      781 gcaggaagag agccagcaac cactgacaga cctgtctcct gctggagtca ctgtgctggg
      841 ggcttttggg gactcaccta cccccacccc tgatcatgag gaaccccgag ggggaccccg
      901 gcctgggatg ccccagccta agggggctcc agccttccag ttgaaccggt gagggcaatg
      961 ggatgagagg gactgatggg atgggagggt gaggagggaa gacaatttag gtctctagac
     1021 cttcagttat tcttcccggg tgggtggtct tccccaatgc agtccatgac tccccttcct
     1081 gatctggttc ccagcctctg gtcccctgcc tcccgagggg gctagtcgga tcctctccaa
     1141 gggcaatggg gctccctgca gcccaggctt tctgtcctat tctcctacca ccctttaatt
     1201 ctagctgtgt cctcttaacc ctgactcctc cttcagcttc agcctcctcc ttggttcctg
     1261 actatgcatt ttccctcttc ctctcaggat tcccctggtg aatctgtgat gccccccatg
     1321 ttggggtgct gccaagcagg aggccaagtg gccagcatag ccaccatcca ctgagggtgg
     1381 ggcaaccatg gggaattggg gccatggtgg ggggctccta gctcctgtcc ttgcacacaa
     1441 cctgggacac tcagtaatcc catgggcaag cccaagcgtt tgtcccccag tgactggggt
     1501 ctcccattcc cacccttgca cattcacatg aaagccttga tcactcaccc acaccctcac
     1561 aggccatagc acagtcacgc tctccatgct gctcctctgc tgtgtcccca ttcacgtctg
     1621 ctcacctggc tccgcgctct ctcccgtgtt gcctacgttc tgccccttta cattctctgt
     1681 gcccatctca gactgggcat gggcatttct ggccccaata tatgacatag tgtgcccact
     1741 ctgcctcatc aatactcact ggtctagctt ctgtggccct tgcatgctgc cctagaggtg
     1801 ggtgggaggt gagccagggg ctccttatac catgtgtcat ggcccattca tgtcttatgt
     1861 ctcaccatcc ttccatccca ttccaaggat gctggcattt ccgagggctc ccccacagga
     1921 attggggtag tgaggcccaa ttactaaact ctgtcacctg aaatatggat ttgggggagt
     1981 cacctgctgc actacatgag atggggctcc catgttctcc cttccctccc aagtcccttg
     2041 tcttgtctgc cctggctgtc tgtgtgtatg tgtctgtatg gaattcggag ccccctccat
     2101 aggtcctcca cctcccaccc tcccctaagg cctccctaaa tgtacctagg ctgccaggaa
     2161 ctgaagccag ctggttcaag gccattggga gctctgcctc cgtatccacc ttctcttcct
     2221 gggtcccgtc acatcccctc atgtcccctc cttccctctc ccttttcctt tcttcaggtt
     2281 ctcccctctt tcttgttcat ctctccagcc cttctccctc ttacctggct cctatgctgt
     2341 gatatatatt tttgtattat ctctttcttc ttgtggtgat aatcttgtgg gatgtaagtt
     2401 tcaaaatttt caaataaagc ctttgcaaga taaaaaaaaa aaaaaaaaaa aaaaaa
//
