LOCUS       NM_001017376            2802 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus phytanoyl-CoA 2-hydroxylase interacting protein
            (Phyhip), mRNA.
ACCESSION   NM_001017376 XM_224336
VERSION     NM_001017376.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Bescond,M. and Rahmani,Z.
  TITLE     Dual-specificity tyrosine-phosphorylated and regulated kinase 1A
            (DYRK1A) interacts with the phytanoyl-CoA alpha-hydroxylase
            associated protein 1 (PAHX-AP1), a brain specific protein
  JOURNAL   Int J Biochem Cell Biol 37 (4), 775-783 (2005)
   PUBMED   15694837
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC092627.1.
            
            On Apr 22, 2005 this sequence version replaced XM_224336.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC092627.1, FQ076246.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132301, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p11"
     gene            1..2802
                     /gene="Phyhip"
                     /note="phytanoyl-CoA 2-hydroxylase interacting protein"
                     /db_xref="GeneID:290356"
                     /db_xref="RGD:1305790"
     exon            1..276
                     /gene="Phyhip"
                     /inference="alignment:Splign:2.1.0"
     exon            277..461
                     /gene="Phyhip"
                     /inference="alignment:Splign:2.1.0"
     CDS             297..1289
                     /gene="Phyhip"
                     /note="PAHXAP1; PAHX-AP1; phytanoyl-CoA
                     hydroxylase-associated protein 1"
                     /codon_start=1
                     /product="phytanoyl-CoA hydroxylase-interacting protein"
                     /protein_id="NP_001017376.1"
                     /db_xref="GeneID:290356"
                     /db_xref="RGD:1305790"
                     /translation="MELLSTPHSIEINNITCDSFRISWAMEDSDLERVTHYFIDLNKK
                     ENKNSNKFKHRDVPTKLVAKAVPLPMTVRGHWFLSPRTEYSVAVQTAVKQSDGEYLVS
                     GWSETVEFCTGDYAKEHLAQLQEKAEQIAGRMLRFSVFYRNHHKEYFQHARTHCGNVL
                     QPYLKDNSGSHGSPTSGMLHGVFFSCNTEFNTGQPPQDSPYGRWRFQIPAQRLFNPST
                     NLYFADFYCMYTAYHYAILVLAPKGSLGDRFCRDRLPLLDIACNKFLTCSVEDGELIF
                     RHAQDLILEIIYTEPVDLSLGTLGEISGHQLMSLSTADAKKDPSCKTCNISVGR"
     exon            462..636
                     /gene="Phyhip"
                     /inference="alignment:Splign:2.1.0"
     exon            637..754
                     /gene="Phyhip"
                     /inference="alignment:Splign:2.1.0"
     exon            755..2776
                     /gene="Phyhip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctcttgcc tctctcttct tgcgcgttca ctcgctgggt tccgagcagc gtcgttttct
       61 tgccgggagc agtagcggta gctgcagagc cagacaggag ctgcctgtgg ggcatggaag
      121 ccgacttccc agcagcccag agaggagcga gcgagccccg ctgcctgtga cccaggcgtc
      181 aggctgctgt cccctgcctg gagagctcat catccacaca gagtctctcc cttccttctc
      241 ttccaagtat ccctctgcag ggccagctga agccaggagc caaacctgag gggaacatgg
      301 agctgctgtc taccccccac agcatcgaga tcaacaatat cacctgtgac tccttccgta
      361 tctcctgggc catggaagac agtgacctgg agagggtcac ccattatttc attgacctga
      421 acaagaagga aaataagaat tccaacaagt tcaagcaccg ggatgtcccc accaagctcg
      481 tggccaaggc tgtgcctttg cccatgacag tgagaggcca ctggttcctg agtccccgga
      541 cagagtacag tgtggcagtg cagacagcag tgaagcagag tgatggagag tacctggtgt
      601 ctggctggag cgagactgtg gagttctgca ctggggacta tgccaaggag caccttgccc
      661 agctgcagga gaaggctgag cagatcgctg gccgcatgct ccgcttctct gtgttctacc
      721 gcaaccatca caaggagtac ttccagcatg ccaggaccca ctgtgggaat gtactacagc
      781 cttacctgaa ggacaacagt gggagccacg gctcccctac cagtggcatg ctgcatggcg
      841 tcttcttcag ctgcaacacg gagttcaaca caggccagcc gccccaggac tccccttatg
      901 gccgctggcg cttccagatc cctgcccagc gcctcttcaa ccccagcacc aacctctact
      961 ttgcggactt ctactgtatg tacacagcct accactatgc catcctggtg ctggcaccca
     1021 aaggctccct gggggaccgc ttctgtcgtg accgtctgcc cctcctggac attgcctgca
     1081 acaagttcct gacctgcagt gtggaggatg gagagctgat cttccgccat gctcaggacc
     1141 tcatcctgga gatcatctac actgagcctg tcgacctgtc cctgggcacc ctgggagaaa
     1201 tcagtgggca ccagctcatg agcctgtcca ctgctgatgc caagaaagat cccagctgca
     1261 agacctgcaa tatcagtgtg ggccgctagg gactcctggg gagctggagg gctggggaga
     1321 gatgacagca gggtggggca tgatatatgg cttaggtttg gggagctggc tttctctccc
     1381 ctctccctgc tccctccact ctgtccactc cccccccctg ttttgaagac aacagaaagt
     1441 ggtcctctta gttagtggcg tgacccattc caggtctggt ggacttggag aggggggtta
     1501 tcagcaggtg ataacctccc tttctgtttc cctcttctgt cttttgactt caagcaggcc
     1561 tccctgagtc ctcaggcatc tcccagagtc ctccccgcct cctgggccaa agcccatgtg
     1621 tagcctgacc tccatgtaga tgcagaaagc tgtggggtac ctccttccta gccccaccca
     1681 ccccactcag ggccacccca gacagcctcc ttcttactca gctgggcctg agggcttttt
     1741 ccgcctccgg actaggcccc tccctttata aataacctcc tgcactgctg tcttgccctg
     1801 gctgctcctt atcccccaga gcccatttcc cgcatgggag aaccatccat cccttccaac
     1861 actgtcgctg gaccacttga gatgccctcc cactctctgg gaaagcacct tctcattttt
     1921 tagtttggag ggcttgctct ggtcttttga gcttttcctt tcttctctct ggggacgata
     1981 atatcctcag caaacctccc tccttgctca gagagcacca aggtctgccg gggtcgagga
     2041 gggggaacca gacccctgag acctgttcct cagccagaag cgggccacct cgtgtcttga
     2101 caggcctgac agagctagag aactccgtgt gacccacaga accctggcac cctgcccagc
     2161 tgtgcacttt gcttgctcac tcgaccgctc tgcctgagag tcatgactgt tctgtgccct
     2221 gtgagccaga tgttgggctc tccatcacac tactacccct tgctctctgg gctgatcccc
     2281 tggggagttc ctgatgaatt cccccacagc tcctggtgtt ttcatcttgt tcttactgtt
     2341 gtctggatta ggagggcgga gagggtggac tccctgagac aagataagca ggtggagaca
     2401 tagaagaggg agggacattt aacatagtaa cattttcaga ggtgacagag atgatacacg
     2461 ggcagctgga cttctgtgaa ggacagagga gctggcagac ccacagggcc atacctctga
     2521 gggacaggtg aatggctggt taccagagac aggactggta gacagtcaag tacctcacta
     2581 cgatgtgcca agagatctgg gatcctggga aatgtgtgga gaagaggatt tgacactccc
     2641 cacccccaag gcccttcccc tctgctgaca gcattgctgt ggtcgtggcc tgttgccttg
     2701 tcctctgtcc ctgggtgggg cacaccctcc tgtgctgtgc ttgccttgtg catcaataaa
     2761 ccacaatggc ccaaggaaaa aaaaaaaaaa aaaaaaaaaa aa
//
