LOCUS       XM_039097816            3365 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phosphorylase kinase regulatory
            subunit beta (Phkb), transcript variant X4, mRNA.
ACCESSION   XM_039097816
VERSION     XM_039097816.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3365
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3365
                     /gene="Phkb"
                     /note="phosphorylase kinase regulatory subunit beta;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 23 ESTs, 1 long SRA read, 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 38 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:361377"
                     /db_xref="RGD:620186"
     CDS             84..3284
                     /gene="Phkb"
                     /codon_start=1
                     /product="phosphorylase b kinase regulatory subunit beta
                     isoform X4"
                     /protein_id="XP_038953744.1"
                     /db_xref="GeneID:361377"
                     /db_xref="RGD:620186"
                     /translation="MAGEEGLMSEVSWKLLERRARAKRSGSVYEPLKSINLPRPDNET
                     LWDKLDHYYRIVKSTMLTYQSPTTGLFPTKTCGGDQKSKVHESLYCAAGAWALALAYR
                     RIDDDKGRTHELEHSAIKCMRGVLYCYMRQADKVQQFKQDPRPTTCLHSVFNVHTGDE
                     VLSYEEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERVYRVPDF
                     GVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNR
                     QTLCSLLPRESRSHNTDAALLPCITYPAFALDDEALFSQTLDKVIRKLKGKYGFKRFL
                     RDGYRTPLEDPNRRYYKPAEIKLFDGIECEFPIFFLYLMIDGVFRGNLEQVKEYQDLL
                     TPLLHQTTEGYPVVPKYYYVPADFVEYEKRNPGSQKRFPSNCGRDGKLFLWGQALYII
                     AKLLADELISPKDIDPVHRFVPLQNQRNVSMRFSNQGPLENDLVVHVALVAESQRLQV
                     FLNTYGIQTQTPQQVEPIQIWPQQELVKAYFHLGINEKLGLSGRPDRPIGCLGTSKIY
                     RILGRTVVCYPIIFDLSDFYMSQDVLLLIDDIKNALQFIKQYWKMHGRPLFLVLIRED
                     NIRGSRFNPILDMLAAFKKGIIGGVKVHVDRLQTLISGAVVEQLDFLRISDTEKLPEF
                     KSFEELEFPKHSKVKRQSSTADAPELRQEPDITITEWKNKSTHEILQKLNDCGCLAGQ
                     TILLGILLKREGPNFITMEGTVSDHIERVYRRAGSKKLWLAVRYGAAFTQKFSSSIAP
                     HITTFLVHGKQVTLGAFGHEEEVISNPLSPRVIKNIIYYKCNTHDEREAVIQQELVIH
                     IGWIISNNPELFSGMLKIRIGWIIHAMEYELQIRGGDKPAVDLYQLSPSEVKQLLLDI
                     LQPQQSGRCWLNRRQIDGSLNRTPPGFYDRVWQILERTPNGIVVAGKHLPQQPTLSDM
                     TMYEMNFSLLVEDMLGNIDQPKYRQIIVELLMVVSIVLERNPELEFQDKVDLDKLVKE
                     AFHEFQKDESRLKEIEKQVFHQSLATHRPGTPCQEH"
ORIGIN      
        1 gcttgcctcc cgacagtgtc gcgcgagggg gcggggccgg gccggccgtg ctgactggca
       61 gccggggtgg tgggcactgt gcaatggcgg gggaagaggg actcatgtct gaagtaagct
      121 ggaagctctt ggaacgacga gcccgggcca agcgctcagg ctcagtttat gaacctctta
      181 aaagcattaa tcttccaaga cctgataatg aaactctatg ggataagttg gatcattatt
      241 acagaattgt caagtcaacg atgctgacat atcaaagccc aactacaggt ctctttccta
      301 ctaaaacttg tggtggagat cagaagtcca aagtgcatga gagcctgtac tgtgctgcgg
      361 gtgcttgggc cttggctctg gcgtacaggc gcattgatga tgacaaggga aggacccatg
      421 agctggagca ctcggccata aagtgtatga gaggagttct ctactgctac atgcggcagg
      481 ctgataaggt ccagcagttc aagcaggatc cccggcccac gacgtgtcta cactctgttt
      541 tcaatgtgca cactggggat gaagtgctct cctatgaaga atatggccat cttcagataa
      601 atgcagtctc actctttctc ctttacctgg tggaaatgat ttcctcaggt ctccagataa
      661 tctataacac ggatgaggtc tcttttattc aaaaccttgt gttttgtgta gagagagttt
      721 accgtgttcc cgacttcggt gtctgggaaa gaggaagcaa atataacaac ggcagcacag
      781 aactgcactc gagctctgtt ggtttggcaa aagcagcctt agaagcgatt aatggattta
      841 acctctttgg aaaccagggc tgttcttggt cagttatatt cgtggatctc gatgctcaca
      901 accgcaacag gcagacgttg tgttcactgt tacccagaga atcacgctct cataacacag
      961 atgctgccct gctcccgtgc atcacctacc ccgcctttgc cctggacgat gaagctctgt
     1021 tcagccagac actcgataaa gtgataagaa aattaaaagg gaaatatgga tttaagcgtt
     1081 tcttgcgaga tgggtacaga acgcccctgg aagaccccaa cagacgctac tacaaaccag
     1141 cggagattaa gctgtttgat ggcatcgaat gtgaatttcc catattcttc ctttacctga
     1201 tgatcgatgg tgtttttaga ggcaatcttg aacaagtcaa ggaatatcag gacctgttga
     1261 cacctttgct tcaccagacc acagaaggat atcctgttgt accaaagtac tattatgtgc
     1321 cagctgactt tgtagaatat gaaaaaagaa accctggtag tcagaagcgg tttcctagta
     1381 actgtggccg tgatgggaaa ttgtttcttt ggggacaagc tctttatatc attgcaaaac
     1441 tcctagctga tgagttaatc agtcctaaag acattgaccc cgtccatcgc tttgtcccac
     1501 ttcagaatca acgtaacgtg agcatgagat tctctaatca gggcccactg gaaaatgact
     1561 tggtggttca tgtggcactt gtagcagaaa gccaacgcct tcaggtcttc ctcaatactt
     1621 acgggattca gactcaaacg ccccagcagg tggagcctat tcagatctgg cctcagcagg
     1681 agctcgtgaa agcttatttc cacctgggta tcaatgaaaa gttgggtctg tctggaaggc
     1741 cagataggcc cattggctgc cttggtactt caaagattta ccgcatccta ggaaggaccg
     1801 tggtttgtta ccctatcatc ttcgacctca gtgatttcta catgtctcag gacgttctcc
     1861 tgctcataga tgacataaag aatgcactac agttcattaa gcagtattgg aaaatgcatg
     1921 gacgcccact ttttcttgtt ctcatccggg aagacaacat aagaggtagc agattcaacc
     1981 ccatattaga catgctggca gcctttaaaa aggggataat tggaggagtc aaagttcatg
     2041 ttgaccgttt acagacattg atatctggag ctgtagtaga acagcttgac tttctgcgga
     2101 ttagcgacac agaaaagctt ccagagttta agagctttga agaactagaa tttcccaagc
     2161 attcaaaagt caaacgacag agcagtactg cagatgctcc tgaactgcga caggagccag
     2221 acatcaccat cacagagtgg aaaaacaaat ccacccacga aatccttcag aagcttaatg
     2281 actgcggttg tctggctggc caaaccatcc tgctgggtat actgctcaaa agagagggcc
     2341 ctaacttcat cacgatggaa ggaactgtgt ctgatcacat tgagagggtg tacagaagag
     2401 ctggcagcaa aaagctttgg ctggctgtgc ggtacggggc tgcatttacc cagaaatttt
     2461 cctcctctat agccccgcac attaccacct ttctggtaca tgggaaacag gtaaccctag
     2521 gtgcctttgg acacgaagag gaggtcatct ctaatccact atctccaaga gtgattaaga
     2581 acatcatcta ttataagtgt aacacccatg atgagaggga ggctgtcatt cagcaagagc
     2641 tggtcatcca tattggctgg atcatctcca acaaccccga gctgttcagt ggcatgctga
     2701 aaatcagaat tgggtggatc atccatgcca tggagtacga actgcagatc cgtggcgggg
     2761 ataagccagc tgtggacttg taccagctct cgcccagtga ggttaagcag ctgctgctcg
     2821 acatcctgca gcctcagcag agtgggagat gttggctgaa tagacgtcag attgatgggt
     2881 cactgaatag aacaccccca ggattctacg accgcgtgtg gcagatcctg gagcgcacac
     2941 ctaatggtat cgttgtagct ggcaagcatt tgccacagca accaaccttg tcagatatga
     3001 ccatgtatga gatgaatttt tctctccttg ttgaagatat gttgggaaac attgaccagc
     3061 caaagtatag acagatcatt gtagagttac taatggttgt atccattgtg ctggaaagaa
     3121 atcctgagct agaatttcaa gacaaagtgg atctggacaa actggtcaaa gaagcgtttc
     3181 atgagtttca aaaagatgag agccggctaa aagaaatcga aaagcaagta tttcatcaga
     3241 gcctggctac acacagacct gggactcctt gtcaagaaca ctaggagttt gagctaccca
     3301 ctaccaccac caccaccacc accaccacca ccaccaccac caccaccaaa ctctttacac
     3361 gatgt
//
