LOCUS       XM_006238122            6132 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PHD finger protein 24 (Phf24),
            transcript variant X6, mRNA.
ACCESSION   XM_006238122
VERSION     XM_006238122.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006238122.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006238122.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6132
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6132
                     /gene="Phf24"
                     /gene_synonym="RGD1559864"
                     /note="PHD finger protein 24; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:500446"
                     /db_xref="RGD:1559864"
     CDS             350..1552
                     /gene="Phf24"
                     /gene_synonym="RGD1559864"
                     /codon_start=1
                     /product="PHD finger protein 24 isoform X1"
                     /protein_id="XP_006238184.1"
                     /db_xref="GeneID:500446"
                     /db_xref="RGD:1559864"
                     /translation="MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSVRRGGELPGSR
                     RGTVEGSVQQVQEEKEAEASAPGVQEESSSNRAAWERLRDGRGVEPEEFDRTSRFTPP
                     AFIRPTRKLDDDKPPDICLEPRESVVNDEMCDICEVWTAESLFPCRVCTRVFHDGCLR
                     RMGYLQGDSAVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSL
                     TLEDFVRYRHQAAKRGDSTRALSDEQEEQAARQFAALDPEHRGHVEWPDFLSHESLLL
                     LQQLRPQNSLLRLLTVKERERARATFLARGRGSTISEAECHQARHSWFCKRLAEAPSC
                     SVSISHVGPIADSSPAGSSSQSQEKALLPTEQESRFVDWPTFLRENVIYILAARPNSG
                     AIHLKPPG"
ORIGIN      
        1 tcagaaacac tggccgcctg acaagctatc tgtttggcta gtctgaaggc tgaggttgct
       61 gcagcaaaaa gtgggttaca cgacagtaca gctctgctgc tggagatgga ggaccaatag
      121 cctctgacaa agctgcacaa ggcggaatgg agcagtcaag gtctttgtga aggttcctct
      181 ggccactccc gaacccagtg ggaacctgaa gtctgtaggt tactgccagg agaccagcaa
      241 ctagaaacag actcccagga cactgcatgg agagactgga ttcctaaagc aacaggcaga
      301 ggagaacaac tggaccactt gggttgcctc caagacctgc ggaggagcca tgggggtgtt
      361 gatgtccaag cggcagacag tagagcaggt gcagaaggtg agcctggctg tgtcagcctt
      421 caaggatggg ctacgggaca ggccttccgt tagacgtggg ggtgagctac cagggtcccg
      481 ccgtggcact gtggagggct ctgttcagca agtacaggag gagaaggaag cggaggcaag
      541 tgcccccggg gtccaggaag agagcagcag caaccgtgca gcctgggagc ggctccgaga
      601 tgggcgtgga gttgagcctg aggagtttga caggaccagt cgattcacgc cccctgcctt
      661 catccgcccc acccggaagc tggacgatga caaacctcca gatatctgct tggaaccccg
      721 ggagtctgtt gtcaacgacg agatgtgtga tatctgtgaa gtctggaccg ctgaaagcct
      781 cttcccgtgc agagtctgca ccagggtttt ccacgatggc tgcctgcgcc gcatgggcta
      841 cctccaaggg gacagtgccg tggaggtgac cgagatggcc cacaccgaga caggctggag
      901 ctgctactac tgtgacaacc tcaacctgct gcttactgag gaggagatgt acagcctcac
      961 ggagaccttt cagcggtgca aagtcatccc tgattgctcc ctgacactgg aggactttgt
     1021 gcgctaccga caccaggcgg caaagcgagg agacagcacc agggccctga gcgatgagca
     1081 agaggagcag gcggcccgcc agtttgcagc cttggaccct gaacaccggg gccacgtaga
     1141 gtggcccgac ttcttgtccc acgagtccct tctgttgctg cagcagctgc gtccccagaa
     1201 ctctctactg aggcttctca ccgtcaagga gagggagcga gctcgagcca ccttcctggc
     1261 acggggcaga gggagcacca tcagcgaagc agagtgccac caagcccgac actcttggtt
     1321 ctgcaagcgc cttgcagagg ctccttcctg cagcgtcagc atcagccatg tgggtcctat
     1381 agcagacagc agcccggccg gcagcagtag ccagagtcag gagaaggccc tgctgcccac
     1441 agagcaggag tccagatttg tggattggcc caccttcctg agagagaatg tcatctacat
     1501 cttggctgct cgtcctaaca gtggagcgat tcacctgaag cccccaggat aggtgggaca
     1561 gagaagctca gttctgggac ggtggcatcc tctctctcct ttcctttctt tttcctttac
     1621 caacctctgg cactgagact catgggaatg ggacactgcc aacatcttaa tttgttatta
     1681 agctttatgg cacggaagcc accgttcccc tcacaacaga ggcagtatgt gtgttgccac
     1741 actgagaagc cctgagagcc gtggcattac ctgctactgg accacctcct gccctcacgt
     1801 cataaaacta cctgccacct catgcataca tatgtgcaca tgcacataca gccacataca
     1861 tgcctagata gccatgcctt caaactcctg gttctttctt tgatgaaaaa ggaccaaaac
     1921 ccctgtgttg agctcccctg gtatagataa gagggtctct tctcactcct ttcactggcc
     1981 agttctgatt cccaggagaa agaaggggac agattaaatt cacttcccct ccaggagacg
     2041 ctgagaggcc caatgcccac atggaaaccc ccttcagtga tgaccactgt tactcgtaag
     2101 tgtctgtatg tccctcaggc gtgccgtagt gggagaacag ttcaaagcca tcccaaagag
     2161 tttgtgttta aattctgagt cctcgtgata gagaaggaaa ctagcttgtg catttctgcc
     2221 tggagaaagt ggagacagtc tctcccagag tcccaggatt ctaggaactt ttcaaccagc
     2281 tcgcaacttc acaagtcctt agcagaacag gaaagccaag gtgagacacc tgtcctattt
     2341 gtcaagtggt atcacatggt ccgaagctct agggacccat gaggaacaga tccactggca
     2401 ggaatggctc tgtgtgagat gctgtagcct aggtggcggc cttggaggcc aatgaggatg
     2461 cagagaagaa aagcaagctg ggtcttccct gcttttcagc ccaacgcaac cccagacata
     2521 gaaatatggc attacatgga gggcaagtca gcctctcaca gagctcagag gagctctgca
     2581 gaatgcctgc gcagttgtgc tttttcagaa gggacaacaa aggcttgaga agatttgtac
     2641 ctcaactgtc aagaagtcag cgtcagaagg gggacagtgt gttcttctcc tgttgccccg
     2701 gttgagttgc tgcttctccc tgctgctcac gccaagtctt cccctctgtg ctaggagatg
     2761 gagctagcct gagaggacct tgtggacact cggagagtgc catgagtgta acaagcttgc
     2821 cctacaagct ttgctccacc ccatccaccc agttctgaag ctctcaagtc agtccatggc
     2881 gtgggtcagc cctaagacct agggccccag gttctggatc tctatactgt caaccacatg
     2941 acttagggat ggccagttct gacaactagc ccttcaagag agaactgagg caagtcacgc
     3001 agaaagaggc tcgaactgtc tgcatggctg aaaacacgtg tgctaaagtg gatggttacg
     3061 agagctcggt gccgagaggc tcagatgcca tgggcatctc cagacaagcc ttgctaagag
     3121 ccctgcatgc tctccttcta tgggacctgc ctgacctaga aacagggtgg tatatggcta
     3181 gagtcagaat gtatggactg aaacggagca gacgggatac atgcgggttt gtttttgaaa
     3241 cctatggctt taaaaaacta ttacttaaaa gctgggcgca gtggtgcata cccttaatcc
     3301 cagcacttga gggacagagg caggtggatc tctgtgagtt gaaggccaga ctagtctgaa
     3361 tagcaagttc taggccagcc aggattacac aagtaagact tagtctcaaa gacaacagtg
     3421 aaaacgactc ggccgtgttc ccaggactga tcagtgaggt ggcccgttat tgaatcgagt
     3481 tgaagacaaa gcacaaactt gctgggttca aggactgcat ctgtagcagc cagccctggg
     3541 gttttccatt gagaagatta aagcatgtta aattcagggg ctcttgctca ttctcccgat
     3601 gagtcagcgc tctctctctc tctctctctc tctctttctc tctctctctc tctctctctc
     3661 tctctctctc tctctctctc tgtgactgtg gactgctgaa ctgcacaaga cactttgaac
     3721 agagataatt catctctggg ccttggacag tgtttttccg ccactcccca gctgtggaca
     3781 ctgggagccc atctcttgct ccatggtcct ttacagacca agacgatgct taccattttg
     3841 gaccagccgt ttctttctcc tttacagttg aatggcagaa gagcacaggc tgaatcagac
     3901 tgtgcagagc tagccccaca gctcatcctc agaaccaggt ctgtccagga tggcacagga
     3961 cagccgacct ctcctccata agcatccagt gttgctcaaa gggaggaccc actgctccct
     4021 agtctgttga tacagaagcc cgccccagcg cagtgtccac aatctctctt ggatgcggcc
     4081 tccccggaga gccccctgca gtgtttatag aggtacactt tcatcaacct agtgagactc
     4141 gttctctttc caagcctttc tatcactgtg actgtctgaa attctgccaa gtgtaaaatt
     4201 aatggctctg atgagggtct gagaaatgtt tcagtctttc ccatttcggc caccaaaagt
     4261 taagctcaat gcttttccta tcctgagctc taaccaaggg aggcttgggt tacatacatg
     4321 cttctctgaa gaccactttc tccaagcctg gttttcaccc agaaactctc ttcccaatat
     4381 tcagattaaa taagggaatg tcaggatgcc acagcagagc tgcagggaca gagttgctga
     4441 gagtggctca gctccgcgta acctctccag gtctgtccct tggcctcctt ccccagcaaa
     4501 acatttgatc tgtggtccct atggtatccc agggatgaag cagtctcctc actcctaggt
     4561 actgattcaa ctcaagtgct cttcctttga ggaaagctgc agcagaagcc atggatacgt
     4621 tgcctctttc tacccccagc ccaagcaatg ggctggcagg gtaaatactt gcctttctgg
     4681 ccctagtgct tcctgtggga ggccatctgg accttgttta agtggccaag ccgtggagtt
     4741 cccccattcc tatcaccaag acagaaagca cagaattcaa ctgcctgaga tgagggcact
     4801 ccactgggaa gtgagtgcca gggttgtccc atgccttagc ccaaagcaca atagtcattg
     4861 caggcatcat ggcttccaga agttcataaa acagtaaggc taggagaaac tgtctcgtag
     4921 gggccatcca gccatgacta ccccagagcc aaagtaagca accttgaggc acaaaacttg
     4981 aactggcagc cagctctggc attccatgtc tccttccaac caacaaagta aagacacata
     5041 ctctgtatgc atgtgcatac agagagacac aagtgtacag ggtcattcgt ggcccagagc
     5101 atggaaaaga ggagcaggtc ttgtctggac cagtgatcaa gagacccatt tctattctgg
     5161 aaacccattc cgagaactgt gtcactaggc gatgtcatct tagtgcaaag agtgctcttg
     5221 cacaaaccaa acagctacca catgagtagg caatattatt tacgggacca ccattgtaca
     5281 tgtcatctgt tgttggttga aatgtcacta ggtggcacat gactattctg tacttggcac
     5341 tgagaggcaa aacaaccttg atgctgaatt ttcagaccat cctggcagga cctgtaacca
     5401 gggccccttt ctaacctgcc atttacagtg gggccagatc tcctcgttct tcttgtcatc
     5461 tgggtttctc ttgctcactg tctctctcgt gtcctggctg cagcccagac aacggagatc
     5521 ttaagtgggc atgatcagta tatggcctgg tcccacagct cagctctgga aaatggtgga
     5581 gccaagcacc actcctgctg ctgcttgcct attgccactg tttttggcaa ccctgtaaag
     5641 aaaaggatag gctacacaga attcccatta gatcaacact aaagaaaaat ggctcccctc
     5701 tgggatgcat gccccagtgg ctcagagcat ggcgacacgg ggttaggtct ggtctagatg
     5761 gataactaaa gcccattcca ttctactttg gaatagaaag ggctgccctt tctatgtcaa
     5821 caatcagcaa aggccttcaa gtttagcctc taagcattaa gggatatcca tggtttgttt
     5881 ccagccaaac agactgggaa ggagactcag agcccttcag taaccgagga tccaaggccc
     5941 tctggctcct cgtgtccttc ccatgcacct tttctgctga aggtgacttg gcagtaattg
     6001 gaggggacca accccaagcc ctgtcttcct gtctacagct gcatgattct ccctgtgacc
     6061 cagcctttgc agtactccag gcggaggctg ggcactgcgg aaaccataat aaacagattg
     6121 cggtgttgtt tc
//
