LOCUS       NM_001107795            4749 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus PHD finger protein 20 (Phf20), mRNA.
ACCESSION   NM_001107795 XM_001065863 XM_230785
VERSION     NM_001107795.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4749)
  AUTHORS   Cai Y, Jin J, Swanson SK, Cole MD, Choi SH, Florens L, Washburn MP,
            Conaway JW and Conaway RC.
  TITLE     Subunit composition and substrate specificity of a MOF-containing
            histone acetyltransferase distinct from the male-specific lethal
            (MSL) complex
  JOURNAL   J Biol Chem 285 (7), 4268-4272 (2010)
   PUBMED   20018852
REFERENCE   2  (bases 1 to 4749)
  AUTHORS   Dou Y, Milne TA, Tackett AJ, Smith ER, Fukuda A, Wysocka J, Allis
            CD, Chait BT, Hess JL and Roeder RG.
  TITLE     Physical association and coordinate function of the H3 K4
            methyltransferase MLL1 and the H4 K16 acetyltransferase MOF
  JOURNAL   Cell 121 (6), 873-885 (2005)
   PUBMED   15960975
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474050.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_230785.4, XM_001065863.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4749
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..4749
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /note="PHD finger protein 20"
                     /db_xref="GeneID:311575"
                     /db_xref="RGD:1305020"
     exon            1..157
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            158..272
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     CDS             190..3222
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /codon_start=1
                     /product="PHD finger protein 20"
                     /protein_id="NP_001101265.1"
                     /db_xref="GeneID:311575"
                     /db_xref="RGD:1305020"
                     /translation="MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVL
                     IHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEDGSSEFQINQQVLACWSDCRF
                     YPARVTAVNKDGTYTVKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKETDHKSLSSSP
                     EKREKFKEQRKATVNVKKNQVEKALKTEKRPKPPDKEGKLTCPEKGRVSEKSLPKNEK
                     EDKENISENEREYSGDAQVDKKPEKDLVKSPQETLKEPKRKRGRPPSITPTAVDSNSQ
                     TLQPITLELRRRKISKRSDTPLKRPRLDKNSSQEQSKKRSENSDKDLSRRRSSRLSTN
                     GTRETLDPDLIVPDLVHTVDTNPLQDKSPSAKESAEGQLESPLEAGQVSSALTCHPIG
                     DGLGAADLELNCKSMGENTMKTEPVSPPAEVQEDSAAEVPNTLKKAGDFVKLHAPAVD
                     LDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEDGSGRTHVQTRGSTVPDKA
                     SQESLPRKRISASSPTAKEKEKNKEKKFKELVRVKPKKKKKKKKKTKPECPCSEDISD
                     TSQEPSPPKTFAVTRCGSSHKPAVHMSPQLHGSDTGNHKGKLKACEEDNLSESSSESF
                     LWSDEEYGQDVDVTTNPDEELEGDDRYDFEVVRCICGVQEENDFMIQCEECQCWQHGV
                     CMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDKEWLSRGHMHGLAFLEENYSHQNAK
                     KIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPDLQLWCQPWKQHSGEGRAHSRHI
                     HITDARSEESPSYRTLNGAVEKPSPLPRSVEESYITSEHCYQKPRAYYPAVEQKLVVE
                     TRGSALDDAVSPLCENGDDPLSPRLGWPIDQDRSRGDIDPKPSSPKVRECIPKKVLLE
                     ETPARKLLDRGGEGLVSSQHQWQFNLLTHVESLQDEVTHRMDSIEKELDVLESWLDYT
                     GELEPPEPLARLPQLKHCIKQLLTDLGKVQQIALCCST"
     exon            273..444
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            445..529
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            530..609
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            610..997
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1111
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..1300
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1480
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1759
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            1760..1858
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            1859..2023
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            2024..2202
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            2203..2302
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            2303..2498
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            2499..2895
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            2896..3079
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
     exon            3080..4749
                     /gene="Phf20"
                     /gene_synonym="RGD1305020"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctgtggag cggctgcgtc actcggtggt ggagatggtg cgtgtgtgtg gggggcgggg
       61 gatacgctgg gcgcgtcccc ggggtcacgt ggtgcgcagc gcgcacagtc cttctgtcgg
      121 ttggtctgga gcggcgcagc aggagcgggg ccgtgaggag aataaaagca gccccgttga
      181 tgactgaaaa tgaccaagca cccacctaac agacgaggaa tcagctttga agtgggagcc
      241 cagttggaag cccgggaccg tttaaaaaac tggtatccgg ctcatattga agacattgac
      301 tacgaagaag ggagagtcct catccatttc aagcggtgga accatcgtta cgatgagtgg
      361 ttttgttggg acagtcctta tctgcgtcct ttagagaaga tacagctgag gaaagagggt
      421 ttgcatgaag aggatggatc ttctgaattt caaataaacc agcaagtgct tgcttgctgg
      481 tctgactgtc gattttatcc agccagagtc actgctgtga acaaggatgg tacttacact
      541 gtgaaatttt atgatggagt agttcaaact gtcaaacata ttcatgtcaa agctttttcc
      601 aaagatcaga atattgtggg taatgctagg cctaaagaaa cagatcacaa aagtctttca
      661 tcgtctcctg agaaacgaga gaagtttaaa gaacagagaa aagccacggt caatgtgaag
      721 aaaaaccaag tggaaaaagc cttaaagaca gaaaagcggc ccaaaccgcc cgacaaagag
      781 ggaaagctga cctgcccaga aaagggcaga gtgtcagaga aaagccttcc caagaacgag
      841 aaggaagata aggaaaacat ttctgagaac gagcgggagt attctgggga tgcccaggtg
      901 gacaagaagc ccgagaaaga ccttgtgaag agtccacaag agaccctgaa ggagccaaaa
      961 agaaaacgag gcagaccccc ttccataact cctactgctg tggattcaaa ttctcaaact
     1021 ttgcaaccaa taacattgga attgagaaga cggaaaatat caaaacgaag tgatacccca
     1081 ttaaagcgcc cccgacttga caaaaattca tcccaggaac agtcaaaaaa acgctctgaa
     1141 aacagtgaca aagacttatc cagaagacgg tcctccaggc tgtccactaa tgggacccgt
     1201 gagaccctag atcccgacct gattgtacct gatctggttc atacggttga tacgaaccct
     1261 ctacaggaca agtcacccag tgccaaggaa tctgctgaag gtcagttgga gtctccattg
     1321 gaagctggcc aggtgtcttc tgcattaact tgccacccca tcggggatgg cctgggggct
     1381 gcagacttgg agttgaactg caagtcaatg ggagagaaca cgatgaaaac agaaccggtg
     1441 tctccgcctg ccgaggtgca ggaagattcc gctgctgaag ttccaaacac tttgaagaaa
     1501 gcgggtgact ttgtgaagtt gcatgcgcca gctgtggacc tggaccacaa gtttcgatgc
     1561 aaggttgtgg actgtttgaa gttcttccgc aaggctaaac tgctgcacta tcacatgaag
     1621 tacttccatg gaatggagaa gtcaccagag ccagaggacg ggtcagggag gacgcatgta
     1681 cagactcggg gctctacagt gcctgataag gccagccagg agagcctgcc ccggaagcgg
     1741 atctcggcca gctccccaac tgccaaagag aaggaaaaga ataaagagaa gaaattcaaa
     1801 gaacttgtga gagtgaagcc aaagaagaaa aagaaaaaga aaaagaaaac caagcctgaa
     1861 tgtccctgca gtgaggacat cagtgatacc tcccaggaac cttctccacc caaaacgttt
     1921 gctgtcacca ggtgcgggtc ctcacacaag cctgcggtcc atatgagccc gcagctccat
     1981 ggttcagata ctggaaacca caaagggaaa ttgaaagcat gtgaggagga taatttgagc
     2041 gagtcctctt ccgagagctt tctttggagt gatgaggaat acggtcaaga tgttgatgtg
     2101 accaccaacc cagatgagga gcttgaaggc gacgaccgct atgactttga ggtggtccga
     2161 tgcatctgtg gagtgcagga ggaaaatgac tttatgattc agtgtgaaga atgccagtgc
     2221 tggcagcacg gggtctgcat gggattactg gaagaaaatg tgcccgagaa atacacctgc
     2281 tacgtttgcc aagaccctcc aggtcagagg cctggcttca agtactggta tgacaaggag
     2341 tggctgagcc ggggacatat gcatggtctg gcatttctag aagagaacta ctcccatcag
     2401 aatgccaaga agattgtggc cacccatcag cttctcgggg atgttcagag agtgattgaa
     2461 gttctgcacg gcttgcagct caagatgagc atcctgcaaa gcagggagca tcctgatctg
     2521 cagctatggt gccagccctg gaaacagcac tcaggggaag ggagagcaca ttccagacac
     2581 atccacatca cagacgccag gagcgaggag tccccaagct atagaacttt gaatggggcg
     2641 gtggagaagc catcgcccct gccccggtct gtagaggagt cttacatcac cagtgagcat
     2701 tgctaccaga aaccccgcgc ctattacccc gctgtggagc agaagctggt agtggagaca
     2761 agaggctctg cccttgatga tgcagtcagc cccctctgtg agaatggtga cgaccccctc
     2821 tcccctcgcc taggctggcc catcgaccaa gataggagca gaggggacat cgatcccaaa
     2881 cccagctccc caaaggtgag ggaatgcatt cccaagaagg tcttgctaga agaaacccct
     2941 gctcggaagc tgctggacag aggtggagaa gggctggtga gctctcagca ccagtggcag
     3001 tttaacctgc tgacacatgt ggagtctctt caggatgaag taacacatcg gatggactcc
     3061 attgagaagg agctggacgt gctggagagc tggctggact acactgggga actggagccc
     3121 ccagagccac tggccaggct tccacagctc aagcattgca tcaagcagct gctgactgac
     3181 ctgggcaagg tgcagcagat tgccctctgc tgctcaacat gaagctgggc acccaagaca
     3241 ttggagcaca atcctggcat gtctgccagg gggcttcgca tatttaagta aataaactaa
     3301 gcatgctgaa tgcacgtgac actgactgac ttcagggatt tagccaggag tgtgatggac
     3361 attgggacaa agagaccatt ttggctgctg gaggacgggg cactcttgat ctggaagccg
     3421 actgcaaagg cagcccatag tcttagaatc cccttctgtg cacattgttg aacgaagcaa
     3481 gtctttgcac atcttcaatt ggaatcgtgc cactgatgat aaacaaaatg agagccaaaa
     3541 aaaaaaaatc tagtagaaaa cagttgtaaa ttcaatttgc agtttattta attgactttt
     3601 gagtcaggta gaggcatgtg ccaacccctc tggtttctct gcctggtgtg gcgtgtgtgc
     3661 agcaggcagc gactgctctc atccctcagc ctcactggaa cgttgggact tcactgtgcc
     3721 atgcagtttt ccaaggctgg ggcccgactg ctctgcttcc tcaagacttc attttctcac
     3781 ctcgactctt gcatggtttc acggtaccag ggacaagttt ttatgttttt actccagagt
     3841 ctgctgggct gtggttttga cagccaagtg aaactgctga aggaggagct agaatcttga
     3901 tggaatgaga atctacaagg aattccagaa ggaagcagtc agggtctgga acccaaagga
     3961 cagcattttc tacccactta ttaaattcaa tagcttccca gttctattta aagttatgaa
     4021 gaaaacgttt ctcaaaattt ttgaactctt ttactgtaaa gatttgttac aaagaacttg
     4081 ggagttattt tacgtcgtca tcatcagcaa acttgcaatt ctatatgtag tctccctcct
     4141 ccctggaggc tggggtagca gttgccgcta cactgtaaca ctttaagtcc ccgtctgtat
     4201 tactttgtga gatgaaggta attatgctgc ttacagtcca ggtacagtct gtttgtacct
     4261 tcagagagat ttgtgttgtc gcaggctctg gttccatgtg tcattgctgt gtcttttggt
     4321 tggttttatc atactaggca aaaggtaaga ggttccgtgc tgtgaggact tcattttttg
     4381 catcactaac ggtaaacttt gtttgattta tccatcaaca cccaccggtt cattatcagt
     4441 tttggaatct gtaatgttct aggctgcaaa tatttactat gtaaccatca aggagccgag
     4501 gtcagtagtt cccaacagca gcacctctag ctgccttggg agtggtttcg tttcaggctc
     4561 aacaggccat tgtggccata aattcaggct tatgtacaga gaagtttcag ggaatggatg
     4621 ccttgtctaa agatctgtct accatttgat ataaagtgag ctgtggggca agcatatagg
     4681 gactgtgtga catgcagtga cgccaacaca gtcccttaca agaggctgct tcccacttct
     4741 cacattgat
//
