LOCUS       NM_001107995            3180 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus PHD finger protein 13 (Phf13), mRNA.
ACCESSION   NM_001107995 XM_001076262 XM_233700
VERSION     NM_001107995.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Kinkley S, Staege H, Mohrmann G, Rohaly G, Schaub T, Kremmer E,
            Winterpacht A and Will H.
  TITLE     SPOC1: a novel PHD-containing protein modulating chromatin
            structure and mitotic chromosome condensation
  JOURNAL   J Cell Sci 122 (Pt 16), 2946-2956 (2009)
   PUBMED   19638409
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233700.4, XM_001076262.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083880.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132308, SAMD00155326
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3180
                     /gene="Phf13"
                     /note="PHD finger protein 13"
                     /db_xref="GeneID:313742"
                     /db_xref="RGD:1308145"
     exon            1..352
                     /gene="Phf13"
                     /inference="alignment:Splign:2.1.0"
     CDS             314..1204
                     /gene="Phf13"
                     /codon_start=1
                     /product="PHD finger protein 13"
                     /protein_id="NP_001101465.1"
                     /db_xref="GeneID:313742"
                     /db_xref="RGD:1308145"
                     /translation="MDSDSCAAAFHPEEYSPTCKRRRTVEDFNKFCTFVLAYAGYIPY
                     PKEELPLRSSPSPANSTAGTIDSDGWDTGFSDITSSVPDRCFSHLQPSLLQRAKPSDF
                     LLDRKKTDKLKKKRRRKRRDSDVPGKEEYRGSLLKLEAADPYVEAPSSPTMQDIPQAS
                     ADPCSGWDSDTPSSGSCATVSPDQVTEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIM
                     VDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS
                     KFDIRRSNRSRMGSRKLFLD"
     exon            353..454
                     /gene="Phf13"
                     /inference="alignment:Splign:2.1.0"
     exon            455..977
                     /gene="Phf13"
                     /inference="alignment:Splign:2.1.0"
     exon            978..3180
                     /gene="Phf13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggggagccg gtcgggttcc cgctcgctgt cgccgccgcc gccccccaca gtgcctctcc
       61 cgcctctcca cagcgccggt cgtgggagct gcatcctcca ctcagttctc tgaggagact
      121 ccagttcggg atcagcgaac ctacgacgcg acacaccgac accccccgtc aaatccagcc
      181 tgggcgaccc ctccccggcc gggtccgccc tcgccctgct cggtgccgga gtcccccggc
      241 cctgagcgtc ccgtgggccc gctcccgcac tctagcctcg gcactcccac agccgccgcc
      301 ccccacccgg aacatggact ccgactcctg cgccgccgcc ttccaccccg aggagtactc
      361 ccccacttgt aagaggcgcc ggactgtgga agacttcaac aagttctgca ccttcgtgct
      421 ggcctatgca ggctacatcc cctatccgaa ggaggagctc cccctgagga gcagccccag
      481 tcctgccaac agcactgcag ggaccatcga cagtgatggc tgggacactg gtttctctga
      541 cattacatct tcagtgcccg accgatgctt cagccacctg cagccttccc tcttgcagag
      601 agctaagccc agtgacttcc tgctggacag gaagaaaacg gacaagctga agaagaagag
      661 gaggaggaag cgcagggaca gcgacgtgcc tgggaaggag gagtacaggg ggagcctgct
      721 gaagctggaa gctgctgacc cgtatgtgga ggccccctca agtcccacca tgcaggatat
      781 tccccaggcc tctgctgacc cctgctcggg ctgggactct gacactcctt caagtggttc
      841 ttgtgctact gtgtcacctg atcaggtcac agaaataaaa actgaaggga aacggactat
      901 tgtccgccag ggaaagcagg tggtgttccg agacgaagac agcactggta atgatgaaga
      961 catcatggtg gactcagatg atgattcctg ggatcttgtc acctgtttct gcatgaagcc
     1021 cttcgctggt cgccccatga tcgagtgtaa cgaatgccac acctggatcc acctgtcttg
     1081 tgcgaagatc cgcaagtcca atgttccgga agtgtttgtc tgccaaaagt gccgggactc
     1141 caagtttgat atccgtcgct ccaaccggtc ccgaatgggc tcccggaagc tgtttctgga
     1201 ctgatctggg gctgtcaagg agataggcgg gactggaagg gcctgggctc tggcctccct
     1261 tagttgagca cagaactcgc agctctggtg tgggcagacc ctgccactca ggtgcctaag
     1321 caaaggacga gccgtccaga tagaactgta catagctagt gagcaggtaa aagggtcagc
     1381 gctgctgctc cagctgtgtt ctctgcgttg gtggcagact gagcaccaga tctgcttctg
     1441 ctaacagtga gtgtgcacag tcattgttag tcagttcccg ccagccatcg ggcggtgctg
     1501 gctgtcagtc ccgtgtcctg tgtgctgggg aggtgttgtg tttattctca gtgttgctct
     1561 tttatcccaa gtgtctatgc agccgtccag gttgcccgcc cctttgtggt ctcacttccc
     1621 tgcctcagtt gtactttctg agacagggag ctgtttcctg agaggtccgg tgtccccaag
     1681 aggagccctg ggtggggggt gagtggtggt tctttggttt ttcactgttt aaagggacag
     1741 tgtgtagcca tttttccaca gagcgagggt gggggtggag gtgttctgtg ttcataactc
     1801 agtttcttgt tttgcacgat gtaaaaaaca aaaaccattt tttttccaca cgacacagcc
     1861 caaagtgtta gccactgtcc tactgggtgc ccgtctctgc tggtggtggt cggtgaccag
     1921 ggtgcccagc actgtgcggt gggagcacat gtttcctcct taagctgctc cagtggcagt
     1981 ccacagaaga cactgtcttt gggacctgtg tgtggttctt cagataatgg gtgacgagtc
     2041 agggcactct gccttgcata caggctgacc tgttgggttc ctggggtgct gcagcagggg
     2101 tctgagttag ttgctgtaac atcagcttgc agggcttcaa aggtgtgaac cagagtcctg
     2161 atctgggtga gggctggctc agctcctgga cactggtgac ctgtcctggg gcaggggagg
     2221 aaggagagga cgatgtgggc tctcgccccg gcgtttccaa tgcttgttct ttctcagcag
     2281 tgtttggcag agccatgggt gtgtttcata cccatctatc acatgtgttc tgtgttagac
     2341 atgagacagc agagcggcca agtgtgtcac ctttcttccc cttcctggaa cacctgcagg
     2401 gtcaccaggc atcttaagca ccaaaggagc tcagactgta gactgtaatt tggctaattg
     2461 gagccttttt tttttttcct ttcttgtctt agcatctttc ccagtttaag taactttttc
     2521 atgttaaagt acagagaagt actgctgagc tgttggttgt gcagacttca agagagcttt
     2581 gctaaggaga aggagctatg acagaagcag tcttgtccct aggctattgt gtggctctga
     2641 ctggggcaaa cacccaggac aagtcaggaa tttgccaaag acctgccccg tgacagttct
     2701 tgtccagtgt cttcaccctg agaataacca aagttccagt aggtttttaa gtgcatttaa
     2761 gatgtgtgtg gttttgttgt ggagcggcgg ggctgccatt cttacatcca tgtgctcaga
     2821 gattactcaa tgcctctgga atacattgga catctcagtt tctgtttgct tgctttgttt
     2881 ttaaggggat ctttccctgt gggtggtgtc cgaagtcaga caccttggtt tgggggtagg
     2941 tgagctgggc agctgcaatc agcttgttta tgcaaactgg gctcgaccct ctaggggctc
     3001 ctggttgatg gctgatggcg ggagggaaag gtgtcatccc caagcagacc cttcccgttg
     3061 gcttcggcca ggccagacac agcatcgttt acatgttctg tgtaattata atgtttatgt
     3121 gtataaagca agctgtttct gtgaaactgt atattttgta aataaagata ttgctacttt
//
