LOCUS       NP_001019918             451 aa            linear   ROD 09-DEC-2020
DEFINITION  PHD finger protein 10 [Rattus norvegicus].
ACCESSION   NP_001019918 XP_214780
VERSION     NP_001019918.2
DBSOURCE    REFSEQ: accession NM_001024747.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Conti V, Carabalona A, Pallesi-Pocachard E, Parrini E, Leventer RJ,
            Buhler E, McGillivray G, Michel FJ, Striano P, Mei D, Watrin F,
            Lise S, Pagnamenta AT, Taylor JC, Kini U, Clayton-Smith J, Novara
            F, Zuffardi O, Dobyns WB, Scheffer IE, Robertson SP, Berkovic SF,
            Represa A, Keays DA, Cardoso C and Guerrini R.
  TITLE     Periventricular heterotopia in 6q terminal deletion syndrome: role
            of the C6orf70 gene
  JOURNAL   Brain 136 (Pt 11), 3378-3394 (2013)
   PUBMED   24056535
REFERENCE   2  (residues 1 to 451)
  AUTHORS   Shain AH and Pollack JR.
  TITLE     The spectrum of SWI/SNF mutations, ubiquitous in human cancers
  JOURNAL   PLoS One 8 (1), e55119 (2013)
   PUBMED   23355908
REFERENCE   3  (residues 1 to 451)
  AUTHORS   Hargreaves DC and Crabtree GR.
  TITLE     ATP-dependent chromatin remodeling: genetics, genomics and
            mechanisms
  JOURNAL   Cell Res 21 (3), 396-420 (2011)
   PUBMED   21358755
  REMARK    Review article
REFERENCE   4  (residues 1 to 451)
  AUTHORS   Lessard J, Wu JI, Ranish JA, Wan M, Winslow MM, Staahl BT, Wu H,
            Aebersold R, Graef IA and Crabtree GR.
  TITLE     An essential switch in subunit composition of a chromatin
            remodeling complex during neural development
  JOURNAL   Neuron 55 (2), 201-215 (2007)
   PUBMED   17640523
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AABR07001769.1.
            
            [WARNING] On Jun 29, 2023 this sequence was replaced by
            NP_001019918.3.
            
            On Jun 16, 2015 this sequence version replaced NP_001019918.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098049.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01906349 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Rattus norvegicus"
                     /strain="mixed"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     Protein         1..451
                     /product="PHD finger protein 10"
                     /note="BRG1-associated factor 45a"
                     /calculated_mol_wt=51053
     Region          26..114
                     /region_name="WH_NTD_PHF10"
                     /note="N-terminal winged helix DNA-binding domain found in
                     PHD finger protein 10 (PHF10) and similar proteins;
                     cd21085"
                     /db_xref="CDD:411035"
     Region          333..386
                     /region_name="PHD1_PHF10"
                     /note="PHD finger 1 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15528"
                     /db_xref="CDD:277003"
     Site            order(350..354,358,381)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277003"
     Region          388..431
                     /region_name="PHD2_PHF10"
                     /note="PHD finger 2 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15529"
                     /db_xref="CDD:277004"
     Site            order(388,400..404,408,426)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277004"
     CDS             1..451
                     /gene="Phf10"
                     /gene_synonym="BAF45a"
                     /coded_by="NM_001024747.2:196..1551"
                     /db_xref="GeneID:292404"
                     /db_xref="RGD:1305266"
ORIGIN      
        1 mgsgdssrsc etssqdlsfs yypaenliey kwppdetgey ymlqeqvsey lgvtsfkrky
       61 pdlerrdlsh keklylreln vitetqctlg ltalrsdevi dlmikeypak haeysvilqe
      121 kerqritdhy keysqmqqqs tqkveaskvp eyikkaakka aefnsnlnre rmeerrayfd
      181 lqthviqvpq gkykvlptdr tkvssypval ipgqfqeyyk ryspdelryl plntalyepp
      241 ldpelpalds dgdsddgedg ggdekrknkg tsdsssgnvs egdsppdsqe dtfqgrqksk
      301 dkmatprkdg skrsvlsksv pgykpkvipn alcgiclkgk esnkkgkaes lihcsqcdns
      361 ghpscldmtm elvsmiktyp wqcmecktci icgqphheee mmfcdvcdrg yhtfcvglga
      421 ipsgrwicdc cqrapptprk vgrrgknske g
//
