LOCUS       NM_001130511            2676 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus PH domain containing endocytic trafficking
            adaptor 2 (Pheta2), mRNA.
ACCESSION   NM_001130511 XM_001067895
VERSION     NM_001130511.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Noakes,C.J., Lee,G. and Lowe,M.
  TITLE     The PH domain proteins IPIP27A and B link OCRL1 to receptor
            recycling in the endocytic pathway
  JOURNAL   Mol Biol Cell 22 (5), 606-623 (2011)
   PUBMED   21233288
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            On Jul 27, 2008 this sequence version replaced XM_001067895.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: CO557798.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132305 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2676
                     /gene="Pheta2"
                     /gene_synonym="Fam109b"
                     /note="PH domain containing endocytic trafficking adaptor
                     2"
                     /db_xref="GeneID:688685"
                     /db_xref="RGD:1586415"
     exon            1..241
                     /gene="Pheta2"
                     /gene_synonym="Fam109b"
                     /inference="alignment:Splign:2.1.0"
     exon            242..2676
                     /gene="Pheta2"
                     /gene_synonym="Fam109b"
                     /inference="alignment:Splign:2.1.0"
     CDS             454..1233
                     /gene="Pheta2"
                     /gene_synonym="Fam109b"
                     /note="family with sequence similarity 109, member B"
                     /codon_start=1
                     /product="sesquipedalian-2"
                     /protein_id="NP_001123983.1"
                     /db_xref="GeneID:688685"
                     /db_xref="RGD:1586415"
                     /translation="MKLNKRSVAHYALSDSPADHTGFLRSWGGPGSPPTPSGTGRRYW
                     FVLKGNLLFSFESRESRVPLSLVVLEGCTVELAEAPVPEEFAFAIRFDAPGVRPHLLA
                     ADGQAAQEAWVKALSRASFGYMRLVVRELESQLQDARQSLALHRCAPQRAVASRSKSQ
                     APDHRAPGPENGHFLPRDGNSMGTVEERGIRPIGRDLTEWELQGPASLLLSMGQSPVS
                     PETSCFSTLHDWYGKEIMELRRRWQQRAKGSQPESKPHNRP"
ORIGIN      
        1 gaggggagtt gaggtggggg catcggggag agactggatg ggctgtaagg agaaactttg
       61 ggggaaaaag agcagcccga attctccttc agtattgagc tggagacctg tgggtagcct
      121 gaggttggac tcggggttcg agaccattcc tcaccctgtg gctcacgccg gtcccaccct
      181 ccagggtctc agtttccctc cacagtgcaa gccgaggtga ctttgcagat ccagaggctt
      241 gttttttgat gtccaggttc cttttttttt tttttttttt tttttttttt gggacccttc
      301 tatgactttt gagatgaaag acaaggaaga ctagtccttc agctgaagtc tgagagctgc
      361 aggaactaca gtccgtcgga accacaggac cgggttgcag atctgagcac cttccctccg
      421 ggtgctaccg tctctctacc tcaccgttcc ggtatgaagc tgaacaagag gagtgtggcc
      481 cactacgcgc tgagcgattc cccagcagac cacactggct tcctgcgtag ttggggagga
      541 ccaggttccc cacccactcc cagtggcact ggccgaagat actggtttgt tctcaagggc
      601 aatctgctgt tttctttcga gagtagagaa agccgggtcc cgctgagtct cgtggtactg
      661 gaaggctgca cggtggagct ggccgaggct ccggtacctg aggaatttgc cttcgccatt
      721 cgctttgatg cccctggagt gcgcccacac ctgctggcag cagacgggca ggctgcccaa
      781 gaggcctggg tgaaggcact gtcccgagcc agctttggct acatgcgact tgtggtgcga
      841 gaattggaga gccagttgca ggatgcccgt cagagcctgg ccctgcatcg ctgtgcaccc
      901 cagagggctg ttgccagtcg cagtaaatct caggctcctg accaccgggc tccaggtcct
      961 gagaatggcc actttctccc tagggacggc aattccatgg gtactgtgga agaaagggga
     1021 atccggccaa taggacggga tttgactgag tgggagttac agggccctgc tagcctcctc
     1081 ctcagcatgg ggcagagccc cgtgtcccct gagacctcct gtttctctac cctgcatgac
     1141 tggtatggga aggagatcat ggagctgagg cggaggtggc agcaaagggc caaggggagc
     1201 cagccagaga gcaagccaca caatagaccc tgagccaggg ccctttaaac tatgaccctg
     1261 tcctgctggt cgggacgcca gggtcagaac ttcaagggtt aaattttcac tcatttacca
     1321 agttgctgtg tgggctgtgt gtgtgaaagt ggcttgaaga ctggcatcaa tgtagctttg
     1381 tcagggctct gtaggaggaa gtcttcaggt gctaaagagg gatttcttct ctcccccgct
     1441 gccctgtcaa tgtatagtgg tgggcatggc ccgcagagag gcaggcagcc ttttagacag
     1501 gagaaactct ctctggcctg ttgtcatggc tacttgtagg gactcttgtc acctagccgg
     1561 ctggttccta aggcttgtct gtggagggcc ctcatactct ctcctgtatc attccaagta
     1621 tctttttctt ttgttctaag gccaaatggg tctaccgagc cagaagccag gcccatctgt
     1681 cccctttata gagatgtaat gacagcggct gtggctcaat agagatatgc cccgtttcca
     1741 aacaaaatct gcctcttcct gaccaccctc ctctccctat ctggggcctt agggcagcct
     1801 ggccaaaacc catcaaggcc tcaaggccaa actttgcctc caggagactg attttcatgg
     1861 tctccctggc tagggccaat tcctgctagt cgtgtttctc aagcctgctt gtaacatcat
     1921 ggccagtggc cctcgactgt acacacaggt attacaggcc tttgctaatg ttcctgtcat
     1981 agtcgttagt gtctgctctt tagttttgga ttttggaggc cgggtctttg tttgcaagtg
     2041 ctgagattat ggatatgagc accatgcctc attggttttg ttttgcagca ggacctggtg
     2101 ggaaggcctg ctagcctcct cccttcccct tataaccaga acagtaaagt ttgcagggtt
     2161 ggtagcaaag aggtagagga ggactaggag ttcaagggca tccttgaata cacggtgagg
     2221 ttttggctag actgggatat gtgtgagatc ctgtccgaaa ggtattcatt ttgattatta
     2281 taatcagtgt gtttacaaat ggagaatcag gagtcagagc tgcaaagccg gtgtctgtgg
     2341 ctagcaactg ggtcggagaa cctggcttgc tggtacaacc gccatcggct caacccctct
     2401 tcttgcttgt tccctagacc tatacgggaa gtccgctgtc cactgcgccc gttgtaccaa
     2461 tgttcacaga cactctgagc tattgttaac ttgtcttttt caccacacta gatagctccg
     2521 gctgtcctgg aactcactat gtagatcaga ctggacttga acttatcaag ttcctcctgc
     2581 ctctgcatcc caagtggtga agttaaaggt gtgcacaact tcgcccagtt ttttgttaac
     2641 tttttgtaac ttttgttaca gttttttttt tttttt
//
