LOCUS       NM_001401853            2997 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus pore forming protein-like (Pfpl), mRNA.
ACCESSION   NM_001401853
VERSION     NM_001401853.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ142146.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               JAXUCZ010000001.1  218836737-218836858
            123-2997            JAXUCZ010000001.1  218837143-218840017
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2997
                     /gene="Pfpl"
                     /gene_synonym="RGD1564458"
                     /note="pore forming protein-like"
                     /db_xref="GeneID:502380"
                     /db_xref="RGD:1564458"
     exon            1..122
                     /gene="Pfpl"
                     /gene_synonym="RGD1564458"
                     /inference="alignment:Splign:2.1.0"
     exon            123..2997
                     /gene="Pfpl"
                     /gene_synonym="RGD1564458"
                     /inference="alignment:Splign:2.1.0"
     CDS             173..2266
                     /gene="Pfpl"
                     /gene_synonym="RGD1564458"
                     /codon_start=1
                     /product="pore forming protein-like precursor"
                     /protein_id="NP_001388782.1"
                     /db_xref="GeneID:502380"
                     /db_xref="RGD:1564458"
                     /translation="MNSFMVTVFIWITVAYAEVEKALEEIYEDGFRKCQNALHLPVLE
                     VLPGGGWDNLRNMDMGQVMDLTYTKCKTTEDGLYIIPDQVFTIPHKESNLELNSEILE
                     SWENYRSTTSFSINLNLDYRPKVNGKFSTEFQRIKTRQVRDHAVTTRVQVRNLFYTVK
                     TDPNAELNLGFKKELMEICYRLEKNQTKMATYLAELLVLNYGTHIITSVDAGAALVQE
                     DHIKSSFLKNNKGNRFAVTASAGFTFAKVLDFKIEAGFGYQNHLATGYLENRTDSRVQ
                     SIGGIPFYPGMTIETWQNGILNHLVAVDRAGLPLHFFIKPEKLPGFPHHLVEQLAKTV
                     ETAAKSYYNFNTYPGCTNINSPNFDFQANTDDGSCDGKVVNSPFGGVYQLCVQISGHG
                     HEDMCQDFRQKNPLTGYFSCPSGYTPVHLLSQPHEKGYVEKECRNKCILKIFCNLECK
                     DVFRVAKAEVKAYWCVASSQVPDNSGLLFGGVFTDKSINPTTNAHSCPTSYFPLKLFE
                     NLKVCVSLDHELGPKFSIPFGGFFSCTQGNPLYNSSTSGDLEKSFQQKCPGGFSQQLA
                     VIIDGCQVSYCVKAGIFTKASLAPARLPPYTQLPMSEFSTDPVDVISSENAKSWVKDP
                     YTLQWSLEEPSNTGGLSGGSTAGITVVVILALGVLIAMAIYGKRRFKKNESNEVPRPQ
                     TFLPFPRARATPDGV"
ORIGIN      
        1 gctacagcct cttcattttc agcaaatgaa tctggcactg aagactgaca agagaacaga
       61 acagtgagcc aagattggaa caagtcaaga acgtgaacaa aacaccacag aaggctcttg
      121 aggctctctg ttggatattc aggactggtg tgtggctgag actatctgca ccatgaacag
      181 cttcatggtt acagtcttca tctggatcac agtggcatat gctgaagtag agaaggcact
      241 tgaagagatc tatgaggacg gttttcgaaa gtgccagaat gctttgcatc tacctgtttt
      301 ggaagtgcta cctggaggag gctgggataa cctgaggaat atggacatgg gacaagtgat
      361 ggacttgaca tacaccaagt gtaaaaccac agaagatgga ctgtacatca tccctgatca
      421 agtcttcact attcctcaca aagagagcaa cctggagttg aactcagaaa tcctggaatc
      481 ttgggagaat taccgaagca ccacctcatt ttccatcaac ttgaatctcg attatcgtcc
      541 taaagtcaac ggcaaattct ctactgagtt ccaaaggata aagacccgtc aagtgagaga
      601 ccatgctgta actacacgag tgcaggtgag aaatttgttc tacacggtga aaaccgaccc
      661 aaatgcagag cttaacttgg ggtttaagaa ggagctcatg gaaatctgtt accgtttaga
      721 gaaaaaccag acgaagatgg ccacctacct ggcagaactc ttggtcctca attatggcac
      781 acacataatc accagtgtgg atgctggggc tgcactggtt caggaggatc acatcaagtc
      841 ctccttcctt aagaacaata agggaaaccg ttttgctgtg actgcatctg ctggatttac
      901 cttcgcaaag gttttggact tcaaaataga ggcaggcttt ggctatcaaa atcacttggc
      961 cacaggctat cttgaaaaca gaactgattc tagggtgcaa agcattggag ggattccctt
     1021 ctacccaggg atgaccattg aaacctggca gaatggcatc cttaaccacc tagtggcagt
     1081 ggaccgtgct ggtttgcccc tgcatttctt tatcaagcct gaaaagctgc ctggttttcc
     1141 acaccacttg gtggagcagc tggcgaagac agtggaaact gctgcgaaaa gctattacaa
     1201 ctttaacacg tacccaggct gcacaaatat caactccccc aacttcgatt ttcaggccaa
     1261 tacagatgat ggctcttgtg atggtaaagt agtcaactct ccctttggag gggtttatca
     1321 gttgtgtgtt caaatatcag ggcatggtca cgaggacatg tgccaagatt tccgtcagaa
     1381 gaatccactt actggttatt tctcttgtcc ctctggctat acccctgtcc atctgctgtc
     1441 tcagccccat gagaagggtt atgtagaaaa ggaatgtaga aataaatgta tcctcaagat
     1501 attctgcaat ctggagtgta aagatgtgtt ccgagtggcc aaggctgaag ttaaagctta
     1561 ttggtgtgtg gccagtagcc aagtaccgga caactcagga cttctctttg gaggagtctt
     1621 cactgacaag agcatcaacc caacgacaaa tgcacattca tgcccaacca gttactttcc
     1681 tctgaagctg tttgagaacc tcaaggtatg tgtttctctg gatcatgaat tggggcccaa
     1741 attttcaatc ccctttggtg ggttctttag ctgcacacaa gggaaccccc tgtataattc
     1801 ttccacatct ggagacttag agaaatcatt tcagcaaaag tgtcctgggg gcttcagtca
     1861 acagctagct gtgatcattg atggatgcca agtgtcctac tgtgtcaagg ctggaatctt
     1921 tacaaaagca tctctggctc ctgctaggct cccaccttac actcagctac ctatgagtga
     1981 gttttccact gacccagttg atgtgataag tagtgagaat gccaaatcct gggttaagga
     2041 cccctatacc ctgcaatgga gtctagagga gccatcaaac actggtgggc tctcaggagg
     2101 atcaactgct ggaatcacag ttgtggttat cctagcatta ggggttttaa ttgccatggc
     2161 catctatggc aaacggagat ttaagaagaa tgaatccaat gaagttccaa gaccacagac
     2221 gtttcttcct tttccaagag ctagagccac tcctgatgga gtgtagaatc caaatccagc
     2281 tcctatcatc tccaggcaca ggttcaagtt cctctttcag tcgtttctcc tccacctctg
     2341 cctttctaag aagtaaacca gaagtcacaa cagaaagaag gatttttata actctgtggt
     2401 tatgtttatg tttacgcact gggaattagt ggatctgtgc aaacaaagca ggggaaggaa
     2461 gacttgcaac tcagtcagta agaacaagcc caggttttca gccacagtag gaattcccaa
     2521 acaagccaat gggtattcac ctgagtctct gcacgtaaga gcaactggga tggacagcaa
     2581 caagaacttt gggatgaagc tccacttagt gtgaagttgg aggagggttt ccaatttgtg
     2641 agcaggaaca ctttgccttc cttctatctt gttttgggtt ttagactcct agagggagtc
     2701 caaactctga aaacacagat agtcctgttc agctggtgct gtggaaactc cacaactctg
     2761 tattgatgac tgcatcatct ccctgtgcac ctgaaaggaa ctgcagggtg caaagcaagt
     2821 ccactttcta tgtctgccct acagttaaga tttaccttgc ccaaaccaca tttagaccac
     2881 tgaattgtat caacaaatct tcagaaatga ttttaactta caaacttctc atgtaacgtc
     2941 aaaggcaaaa gggtggtggg gaactggcaa taaatcaaga aatgtaaaaa ctgaaaa
//
