LOCUS       NM_212506                697 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus prefoldin subunit 6 (Pfdn6), mRNA.
ACCESSION   NM_212506 XM_228015
VERSION     NM_212506.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Myung JK, Afjehi-Sadat L, Felizardo-Cabatic M, Slavc I and Lubec G.
  TITLE     Expressional patterns of chaperones in ten human tumor cell lines
  JOURNAL   Proteome Sci 2 (1), 8 (2004)
   PUBMED   15598346
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Hurt P, Walter L, Sudbrak R, Klages S, Muller I, Shiina T, Inoko H,
            Lehrach H, Gunther E, Reinhardt R and Himmelbauer H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
REFERENCE   3  (bases 1 to 697)
  AUTHORS   Vainberg IE, Lewis SA, Rommelaere H, Ampe C, Vandekerckhove J,
            Klein HL and Cowan NJ.
  TITLE     Prefoldin, a chaperone that delivers unfolded proteins to cytosolic
            chaperonin
  JOURNAL   Cell 93 (5), 863-873 (1998)
   PUBMED   9630229
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX883042.1.
            
            On Sep 12, 2009 this sequence version replaced NM_212506.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Variants 1 and 2 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB580247.1, CB584226.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-296               BX883042.1         115085-115380       c
            297-367             BX883042.1         114807-114877       c
            368-492             BX883042.1         114591-114715       c
            493-697             BX883042.1         113906-114110       c
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..697
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /note="prefoldin subunit 6"
                     /db_xref="GeneID:309629"
                     /db_xref="RGD:1303006"
     exon            1..296
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /inference="alignment:Splign:2.1.0"
     CDS             233..616
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /note="prefoldin 6; MHC class II region expressed gene
                     KE2"
                     /codon_start=1
                     /product="prefoldin subunit 6"
                     /protein_id="NP_997671.1"
                     /db_xref="GeneID:309629"
                     /db_xref="RGD:1303006"
                     /translation="MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVK
                     EELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSE
                     QQRETLAQLQQEFQRAQNAKAPGKA"
     exon            297..367
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /inference="alignment:Splign:2.1.0"
     exon            368..492
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /inference="alignment:Splign:2.1.0"
     exon            493..697
                     /gene="Pfdn6"
                     /gene_synonym="Ke2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgtttattt ccgggtttat gaatacagag ggcagagcgt gaaaaggtta gggtttggat
       61 ttaggggggt gtctcttctt ttcgctctct aatgcctagg gagtgactat tctggacgta
      121 gagagtccac ggtagctcgt gctgtccttc tgcagggcca ggaaggggag ctcaggtgct
      181 tttcagagct tgagacccag cgacccccgc ccaggaggct ttctccttca ccatggccga
      241 actgatccaa aagaagctgc agggagaggt agagaaatat caacagctgc agaaggactt
      301 gagtaaatcc atgtcaggga ggcagaagct tgaagcccag ctaacggaaa ataacattgt
      361 gaaggaggaa ctggccttgc tggatggatc caacgtggtc tttaagcttc tgggacccgt
      421 gcttgtcaaa caggagctgg gggaggctcg ggccacagtg gggaagaggc tagactacat
      481 cacagcggaa attaagcgct acgaatcgca gcttcgggac ctcgaaaggc agtcagagca
      541 acagagggaa acccttgctc agttgcagca ggagttccag cgggcccaga acgcaaaggc
      601 tcccgggaaa gcctgacccc gtgggagggg gagggggctg gggagggagg gatgaggcta
      661 accctgagtc aataaaatgt aaacagaacc aaaccta
//
