LOCUS       XM_006237235            4204 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peroxisomal biogenesis factor 26
            (Pex26), transcript variant X1, mRNA.
ACCESSION   XM_006237235
VERSION     XM_006237235.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006237235.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006237235.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4204
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4204
                     /gene="Pex26"
                     /note="peroxisomal biogenesis factor 26; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 ESTs, 2 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 186 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297570"
                     /db_xref="RGD:1584998"
     CDS             834..1736
                     /gene="Pex26"
                     /codon_start=1
                     /product="peroxisome assembly protein 26 isoform X1"
                     /protein_id="XP_006237297.1"
                     /db_xref="GeneID:297570"
                     /db_xref="RGD:1584998"
                     /translation="MKSEASTSAAPLKGLVGPLRSSEPALALPAVSPAVHLLEEAADL
                     LVVHLDFHAALETCERAWQSLAEEPASGTVVEVKCSLCVVGIQALAEMDRWREALSWV
                     LGYYHVPEKLPPKVLELCILLYSKMKDPEAVLGVAGAWLQDPDNQGLPEYGSLAKLHL
                     FRLLLPLGRLSEAEELAVGSAAFSEEQRVEALQAIHTAQQQLTQEHLSSQEPQKLRQE
                     GSFPRKLLSLLMLLRRLCGSAVSHLLSQPFRKGLLAALILCLLVLRFDPAPSSLPFLY
                     QLTQLFRRIQKATLSRLYPLTLRD"
ORIGIN      
        1 atgttttcgt gacttatttg ttgtgtgacc tatctcatct gtaaatagaa taatagttgt
       61 ccttaactca tagagatgaa taaatgagac agaaagcgtt tttgcactct gccacacttt
      121 atagcatcat cgaacccagg aaaaggaaat agccagctcc agagttttcc ttttcttttt
      181 cttcttttcc tgaggttacg aataaaggtg caggcagctc cacctcctta ctgaaatttc
      241 ctccgtccgt cctcttccgg ttagcgagga atggatctta tttcacagga caaaggcatt
      301 tcactaatgt ttcagcttcc ccatctttcc caccgcgaag ctggtgatct ggtgagttat
      361 ttctggaaga tgacagtctc tgggagccag aggttccccg aagcttcaca ggcccaagaa
      421 gccaggacta caattcccag aatcctgagc tccagggcgc gcgcgtgcgc cgtagtggcg
      481 aagggagtgg ggcggagttg tctatggccg tgagttccct gtgcacgtct ctgttgtccc
      541 cctctctact ctgggtgctt cggtgcttct agcacaggtc tatgggtagg aggaactagt
      601 gctgggcctt ccttcgacag cttcttaagt tttgaacagg ccagtccctc aaaggttagg
      661 ctgtgcctgg gtccagcgcc ttcatgttcc ttccctagaa aaagatctgg agaggcgtgg
      721 agaggaagag tgagaggctt acgggtcatt taccaggcct actccggatt tccaggaagc
      781 tccgaagctg tcctcctgac gtgtgaagaa acctggtcga agccaggctg gctatgaaga
      841 gcgaagcttc gacttctgca gcccctttga aagggctcgt gggccctctg cggagcagcg
      901 agcccgcgct cgccctcccg gctgtgtcac ccgcggtgca cctgctggaa gaggcggccg
      961 acctgttggt ggtgcacctg gacttccacg ccgcactaga gacttgcgaa cgagcctggc
     1021 agagcctggc ggaggagccc gcgagtggca ctgttgtgga ggtgaaatgt tccctgtgtg
     1081 tagtggggat ccaggctctg gcagaaatgg atcgatggag agaagccttg tcctgggtcc
     1141 tcgggtatta ccatgttcct gaaaagctgc ctcccaaagt cctggagcta tgcatccttt
     1201 tatacagcaa aatgaaagat cccgaagctg tgctgggtgt ggccggagcc tggctccagg
     1261 acccagataa ccagggcctt ccagaatatg gatcgctggc caaactccac ctgttccggc
     1321 tgctgctacc cttgggtcgc ttgtcagagg ctgaggagct ggccgtgggc tctgcggcct
     1381 tcagcgagga gcagcgggta gaggcgctcc aggccatcca cacagcacaa caacagctca
     1441 cacaggagca tttgagctcc caggagcccc agaagctgag gcaggaaggt tcatttcccc
     1501 gtaagttgct gtcactgctg atgctgcttc gccgcctttg tggctctgcg gtgagccacc
     1561 ttctctccca gccctttaga aagggcctcc tggctgcctt gatcctctgt ctcttggttc
     1621 tacggtttga tccagctcct tcttcactgc ccttcctcta ccagctgacc cagctcttcc
     1681 gccggatcca gaaggccacg ctttctcggc tctacccgct caccctccgg gactgagtgg
     1741 tcctacgtgg ctgcctctgc ttcttacagt ccccatctac agaagcggaa aagccgagcc
     1801 cagtggctgg gtcccagatg gcaccatggc agtgggccca ttcgttctag gaggaggagc
     1861 caaggcggga gagccatggc ttgcctgtga acccgccctt ccgtatccca ttgtggctgg
     1921 cctcaaaagg agtgtgtgaa cagtggtgcc cgaggccagc gcacagaatt ctgcacagct
     1981 cctcaaaaag aaggggttta ggagcaggga ctgggtcttg agacattgtg gtttcttgac
     2041 aaaggcagag ggtgaccttc cagatcgggc gctggaggag ctgcgattca caaacgcggt
     2101 ggagcggccc ttagccattt acctctgaaa cccctccaca gctcagtacc tgaattcagt
     2161 aaaaccggag tcctctcttc ccccacgccc ctcccacaga ggctgggatc agttcaccat
     2221 cccctcccat tggtccagct ttctgctaga ggcatttttc tgttcagaca ggatgtggct
     2281 tctgacccac ccaggtagcc acaggagcaa tgtgagcctg cctgacctta tctctgggga
     2341 atgtgatctt tcttggtgcc gctgagtctt agcacagttt gccagcatgc ctggggcatg
     2401 cactgctctc tgggacccac tgtcttccca ctctacccca ccaccttttg acctgtccag
     2461 tcccctgtgt ctcaccactg actctccttg gtcctttctc agggtcctag ttgtctgttg
     2521 tttgaataat gcccaagtct ctgctcctgt gctgtgaaaa gtaggccagg cacagggctg
     2581 ggagctgaaa atggaactgg gtaatcaggt gagctgtaag atccgagggg gctgggggtg
     2641 ggggtcagag ggacaacccc agggaggagg cactgcacag gcctcagcat gtctgtgtaa
     2701 gaaagtgcag aatactctgg tgccgccagg atggaggccc tcagccggcc acccactccg
     2761 gatctctgac accggatggc aagagtgccg agagggtttg ctagcctttc tgttggttga
     2821 tttttaggga ctgtgagcca gtagcttttc tctagaagag gaaaactcac agacagaatt
     2881 ccatcaaaat cctgaagact tggtaactag aaccatctta caaaaaaaca aaaacagacc
     2941 ctagatcgct ggggagagaa aaggactccg gaaggttgaa atcccttggc catgactcct
     3001 tcactgttgc ccaacttggc ccagaaggcc tgggctcaag tgctgaactc caccctccag
     3061 cctcttgagt gtctgtgact cacacacctt atgacaatgg ttttgaaatg tggatctgca
     3121 tgttcactgc cctagaagaa actccttaat ggcttccgtg gcccacagga taaaaatcca
     3181 gattctcttc agtggaaact taggcccagt gttcgcaggc ttggctgacg gctcctttgc
     3241 cgtgttgccc tgctccctca gcaggctgcg ttctagctgc caggccctcc tcaggcctct
     3301 ctgtcatggc ttcgctgtaa ctgctggagg gtcttgtagc ggctctgccc cagatccttg
     3361 gctttccagg ctccctcaag agctacctag catcctttgc ttcccagcct ctgcctcccg
     3421 cccctcctgc aggaaagcgt ggtggtggca ggactgtttg cctctgaagc cgcagagcaa
     3481 ggctgcacag tgtttgagtc aggctcacgt tcctgctctg ctgtgtgggt gactgttggc
     3541 cagggctcag ccttctcggc tacaggttgg tcctcttctc acagggcctc ttccatgagt
     3601 gaatagggct cttttggcac tttccacagc cctgagggac agttcttgtg agccgtggct
     3661 attcccaggc acaggggtga gtgagtgatg ggcacgtgct tctggtgcct gcgctgtcct
     3721 gtgctgtgaa atcctgaact gatcagacca gcttgtcttt ctcctgatgc tcctcagtgt
     3781 cgctctgctg gtggcccatg gggctctggc tattttacct gactgccgca gggctgtctg
     3841 taccctcact gcctgcctat caggtgagga actcgaagcc caaactgctg ctgttacttt
     3901 gacctttcca aggatgtagg ctggtcctca gctctgggct taagaggtca gagtgaaggg
     3961 agggccggcc ttgtttggta ggccagcact gcagccatca gccaaaggca gcttttgagc
     4021 atttgagttg tggctcaccc atgtggacac atgctgtaat tgtaaaacat acacactgga
     4081 tttcaaagac caagtacaaa aaaataaaaa ttaaattaaa aaaaaactgg aagattttta
     4141 tattgattat gttgaaatga taatattttg gatatatttg gttcaataaa attgaataag
     4201 ctaa
//
