LOCUS       NM_001025684            1456 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus peroxisomal biogenesis factor 11 beta (Pex11b),
            mRNA.
ACCESSION   NM_001025684 XM_227468
VERSION     NM_001025684.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Koch J, Pranjic K, Huber A, Ellinger A, Hartig A, Kragler F and
            Brocard C.
  TITLE     PEX11 family members are membrane elongation factors that
            coordinate peroxisome proliferation and maintenance
  JOURNAL   J Cell Sci 123 (Pt 19), 3389-3400 (2010)
   PUBMED   20826455
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 1456)
  AUTHORS   Kobayashi S, Tanaka A and Fujiki Y.
  TITLE     Fis1, DLP1, and Pex11p coordinately regulate peroxisome
            morphogenesis
  JOURNAL   Exp Cell Res 313 (8), 1675-1686 (2007)
   PUBMED   17408615
REFERENCE   4  (bases 1 to 1456)
  AUTHORS   Jones JM, Morrell JC and Gould SJ.
  TITLE     PEX19 is a predominantly cytosolic chaperone and import receptor
            for class 1 peroxisomal membrane proteins
  JOURNAL   J Cell Biol 164 (1), 57-67 (2004)
   PUBMED   14709540
REFERENCE   5  (bases 1 to 1456)
  AUTHORS   Kikuchi M, Hatano N, Yokota S, Shimozawa N, Imanaka T and Taniguchi
            H.
  TITLE     Proteomic analysis of rat liver peroxisome: presence of
            peroxisome-specific isozyme of Lon protease
  JOURNAL   J Biol Chem 279 (1), 421-428 (2004)
   PUBMED   14561759
REFERENCE   6  (bases 1 to 1456)
  AUTHORS   Mootha VK, Bunkenborg J, Olsen JV, Hjerrild M, Wisniewski JR, Stahl
            E, Bolouri MS, Ray HN, Sihag S, Kamal M, Patterson N, Lander ES and
            Mann M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   7  (bases 1 to 1456)
  AUTHORS   Sacksteder KA, Jones JM, South ST, Li X, Liu Y and Gould SJ.
  TITLE     PEX19 binds multiple peroxisomal membrane proteins, is
            predominantly cytoplasmic, and is required for peroxisome membrane
            synthesis
  JOURNAL   J Cell Biol 148 (5), 931-944 (2000)
   PUBMED   10704444
REFERENCE   8  (bases 1 to 1456)
  AUTHORS   South ST and Gould SJ.
  TITLE     Peroxisome synthesis in the absence of preexisting peroxisomes
  JOURNAL   J Cell Biol 144 (2), 255-266 (1999)
   PUBMED   9922452
REFERENCE   9  (bases 1 to 1456)
  AUTHORS   Schrader M, Reuber BE, Morrell JC, Jimenez-Sanchez G, Obie C, Stroh
            TA, Valle D, Schroer TA and Gould SJ.
  TITLE     Expression of PEX11beta mediates peroxisome proliferation in the
            absence of extracellular stimuli
  JOURNAL   J Biol Chem 273 (45), 29607-29614 (1998)
   PUBMED   9792670
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098865.1.
            
            On Jul 22, 2005 this sequence version replaced XM_227468.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098865.1, EX489657.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1456
                     /gene="Pex11b"
                     /note="peroxisomal biogenesis factor 11 beta"
                     /db_xref="GeneID:310682"
                     /db_xref="RGD:1310353"
     exon            1..228
                     /gene="Pex11b"
                     /inference="alignment:Splign:2.1.0"
     CDS             173..949
                     /gene="Pex11b"
                     /note="peroxisomal biogenesis factor 11b"
                     /codon_start=1
                     /product="peroxisomal membrane protein 11B"
                     /protein_id="NP_001020855.1"
                     /db_xref="GeneID:310682"
                     /db_xref="RGD:1310353"
                     /translation="MDAWVRFSAQSQARERLCRAAQYACSLLGHALQRHGASPELQKQ
                     IRQLEGHLSLGRKLLRLGNSADALESAKRAVHLSDVVLRFCITVSHLNRALYFACDNV
                     LWAGKSGLAPRVDQEKWAQRSFRYYLFSLIMNLSRDAYEIRLLMEQETSAHSRRMKIS
                     GVGVSGLETGGPGGPGTPGGCLPQLALKFRLRILLLARVLRDHPPLLLDVLRNACDLF
                     IPLDKLGLWRCGPGIVGLCGLISSVLSILTLICPWLRLKP"
     exon            229..344
                     /gene="Pex11b"
                     /inference="alignment:Splign:2.1.0"
     exon            345..546
                     /gene="Pex11b"
                     /inference="alignment:Splign:2.1.0"
     exon            547..1420
                     /gene="Pex11b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgcccacg atctcacttc gcgtcctgaa attccgcttc aaggctggct ccggctggtt
       61 ggtcttcctg ccgtggtttg tccctcgcga agccccgttg ctcgcccagg aggcgtgact
      121 tggggctgga agcaggcggg ctgaggcgcc ttgggcccgg gctgccgctg tcatggacgc
      181 ctgggtccgc tttagtgctc agagccaagc ccgggagcgg ctctgtaggg ccgcccaata
      241 tgcctgttcc cttctcggcc atgctttgca gagacatggg gctagtcctg agttacagaa
      301 acagattcga caactggagg gtcatctgag cctcggacga aagttgctcc gcctggggaa
      361 ctcagcagac gccctggagt cagccaaaag agctgtgcac ctgtcagatg tcgttctgag
      421 attctgcatc actgttagtc acctcaacag agccttgtac tttgcctgtg acaatgttct
      481 gtgggctggg aagtctggac tagctccccg tgtagaccag gagaagtggg cacagcgttc
      541 cttcaggtac tatctcttct ccctcatcat gaacctgagc cgggatgctt atgagattcg
      601 cctgttgatg gaacaagaga cttcagctca cagcaggcga atgaagattt ctggagtagg
      661 agtctcagga ttagagactg ggggacctgg aggaccaggg actccaggag gatgtctgcc
      721 acaactggct ttgaaatttc ggctccgaat cctgctactg gcacgtgtcc ttcgagatca
      781 cccccctctt ctgctggatg tgctgagaaa tgcctgtgac ctcttcatcc cactggacaa
      841 actaggcctc tggcgttgtg gccctgggat tgtggggctg tgtggcctca tatcctccgt
      901 tctgtctatt ctcaccctaa tctgtccctg gctacgactc aagccctgac agtgtggtat
      961 gagataagga gggaacccaa attgatgaga tgggagctga gcctgtcccc cgtgtgccag
     1021 cctcgttcca atgaactcct tgtctgaagt taaaatccag acacttaggg atgaggggaa
     1081 gaacctgcca aagacaggtc aggaaggcga tgcccatggg aagactccag cgcacctctg
     1141 cggttggcct tcagttccat tgccagaacc tctttgctgt cttcccttta tctagatgtc
     1201 ttgagtctag ttaaaagttt gttaccttgg gctggagaga tggctcagca gttaagagca
     1261 cccgactgct cttccagagg tcatgagttc aattcccagc aaccacatgg tggctcacaa
     1321 ccatctgtaa agagatctga tgccctcttc tggtgtatct gaagacagct acagtatact
     1381 tatatataat aaataaataa atctttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1441 aaaaaaaaaa aaaaaa
//
