LOCUS       NM_001106945            1138 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus PDZ domain containing 11 (Pdzd11), mRNA.
ACCESSION   NM_001106945 XM_001059007 XM_217572
VERSION     NM_001106945.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Shah,J., Rouaud,F., Guerrera,D., Vasileva,E., Popov,L.M.,
            Kelley,W.L., Rubinstein,E., Carette,J.E., Amieva,M.R. and Citi,S.
  TITLE     A Dock-and-Lock Mechanism Clusters ADAM10 at Cell-Cell Junctions to
            Promote alpha-Toxin Cytotoxicity
  JOURNAL   Cell Rep 25 (8), 2132-2147 (2018)
   PUBMED   30463011
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Goellner,G.M., DeMarco,S.J. and Strehler,E.E.
  TITLE     Characterization of PISP, a novel single-PDZ protein that binds to
            all plasma membrane Ca2+-ATPase b-splice variants
  JOURNAL   Ann N Y Acad Sci 986, 461-471 (2003)
   PUBMED   12763866
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473966.2.
            
            [WARNING] On Oct 17, 2024 this sequence was replaced by
            NM_001106945.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001059007.1, XM_217572.4.
            
            ##Evidence-Data-START##
            CDS exon combination :: FM098873.1, FM097156.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA5760494, SAMN12840115 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1138
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /note="PDZ domain containing 11"
                     /db_xref="GeneID:302422"
                     /db_xref="RGD:1560007"
     exon            1..187
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     exon            188..287
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     CDS             201..623
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /codon_start=1
                     /product="PDZ domain-containing protein 11"
                     /protein_id="NP_001100415.1"
                     /db_xref="GeneID:302422"
                     /db_xref="RGD:1560007"
                     /translation="MDNRIPYDDYPVVFLPAYENPPAWIPPHERVYHPDYNNELTQFL
                     PRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDF
                     QDIEHSKAVEILKTAREISMRVRFFPYNYHRQKERTVH"
     exon            288..371
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     exon            372..428
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     exon            429..527
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     exon            528..588
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
     exon            589..1138
                     /gene="Pdzd11"
                     /gene_synonym="RGD1560007"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggaggcta gagagctggc tcgcccaaag caagctccgc ccgtgctggg tggtagcaag
       61 catccgcttc cggttccaag gcggaattgg ctgtcgctaa gggaggccta cttaccggta
      121 aggtggcgct gaattaagtg gtcgcgagtg cggggtacgg gcgggttgca ggacctggat
      181 ctggaagggc tttgcctgaa atggacaacc ggattcctta tgatgactac ccagtggttt
      241 tcctgcctgc ctatgaaaac cctccagcat ggattcctcc tcatgagaga gtataccacc
      301 cagactacaa caatgagttg acccagtttc tgccccgaat tgtcacattg aagaagcctc
      361 ctggtgctca gttggggttt aacatccgag gaggaaaggc ctcccagcta ggcatcttca
      421 tctccaaggt gattccagac tcggatgcac atcgagcagg acttcaagaa ggggaccaag
      481 ttctagctgt gaatgatgtg gacttccaag atatcgagca cagcaaagct gtggaaatcc
      541 tgaagacagc ccgagaaatc agcatgcgtg tgcgcttctt tccctacaat tatcatcgcc
      601 aaaaagaacg gactgtgcac tagagacttg cagcccacag ccctacctgt ggaatctgcc
      661 aggacaagct gggtagacct ctgagaagtt ggagaagtca ggaaattcta ttctccacac
      721 cctcctggtt tatggatggg gaggatgggg agacagctta ccagctgtat tacgtattaa
      781 ctgtactgtg ctaggagttc cctagtttgc taggtgagtt tcattctgga aagggagaaa
      841 gatagtgata tctagatgtc tgtagcctgt ggaggaaagc caactagaaa acaactggca
      901 tttatcaggt accttagatt ggtcacgtat acagcttatt gttttatttg tagaaatcag
      961 tagaaaagag aatcatgggg accttccatc tgatttgcct ggccatgcca tcgagtcttt
     1021 gtaccttgga gtcccataca cttcagagac tccaaggaga cacttccttc tcatccccgc
     1081 ccccacccat agtaaaaaac ataatactga ataaacgtgg cttgagtgat gctgcttg
//
