LOCUS       NM_001109544            1253 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus programmed cell death 2-like (Pdcd2l), mRNA.
ACCESSION   NM_001109544 XM_001073061 XM_001073097
VERSION     NM_001109544.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001073097.1, XM_001073061.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1253
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /note="programmed cell death 2-like"
                     /db_xref="GeneID:689637"
                     /db_xref="RGD:1589941"
     exon            1..139
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..1114
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /codon_start=1
                     /product="programmed cell death protein 2-like"
                     /protein_id="NP_001103014.1"
                     /db_xref="GeneID:689637"
                     /db_xref="RGD:1589941"
                     /translation="MAAVRKPVLLGFRDSAVKGCPKGPAAWTASKIGGVPDALPAVTA
                     PGPRCDRCAQPLALVVQVYCPLEGSPFHRLLYVFACARRDCSDNQTRSWKVFRSQCLQ
                     VPEKETRNGQNQSEGLAAENWCEGSHDWGSDTEETPPPPPPADLGRDSNDARALDWTD
                     KLQALHLQDSALAVACPSPSVPTEVPQFQPYYISVAEEDEYGNVADLDHAHSLLQEYQ
                     QREGVDMQQLLSVGCSDGDEKYEKTKVSSGDPTFYKFMKRISVCQGQILRYSWSGEPL
                     FLSCPTFEVSEVPVCSGCGGQRAFEFQLMPALVSMLNSTNLGLTVEFGTILVYTCKQS
                     CWPPNQQMPMEEFCVIQEDPDAFLFK"
     exon            140..306
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     exon            307..367
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     exon            368..726
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     exon            727..834
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     exon            835..983
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
     exon            984..1253
                     /gene="Pdcd2l"
                     /gene_synonym="RGD1308249"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcgcgctgt cacgtggaga acccagttgt tatggcggcc gtcaggaagc cggtgctgct
       61 gggatttcga gactcggcgg tgaagggctg ccccaaggga cccgccgcct ggacggctag
      121 caagataggc ggcgttccgg acgccctgcc ggccgttact gccccgggcc cgcggtgtga
      181 ccgctgcgca cagccgctcg cgctcgtcgt gcaggtgtac tgcccgctgg aaggctcccc
      241 gttccatcgg cttctgtacg ttttcgcctg tgcccgtcgg gactgcagcg acaaccagac
      301 gcgcagctgg aaggtgttcc gctcccagtg cctgcaagtg ccagagaaag agactcggaa
      361 cggacagaat cagagtgaag gccttgccgc tgagaactgg tgtgagggct cacatgactg
      421 gggaagtgat accgaggaga cgcctccgcc accaccccca gcagatttgg gaagggattc
      481 taatgatgcc agagcgctag actggactga caagctccaa gctcttcacc tgcaggatag
      541 tgccctggct gttgcctgcc cttccccttc agtccccacg gaagtgccac agttccagcc
      601 ctattatatc agtgttgccg aagaggatga gtacggcaac gttgcggatc ttgaccacgc
      661 ccacagcctc ctgcaggagt accagcagag agaaggtgtt gacatgcagc agctgctctc
      721 cgtgggttgc agtgatgggg atgaaaaata cgagaagacc aaagttagca gtggagatcc
      781 aacgttttac aagttcatga agaggatctc tgtttgccag gggcagattc tgaggtattc
      841 atggagtgga gagcctctct ttctgtcctg ccccacattt gaagtctcgg aggtcccagt
      901 ctgcagtggc tgcggaggcc agagggcgtt tgagtttcag cttatgccag cactggtcag
      961 catgctcaac agtactaatc taggtctcac tgtggaattt gggacgattc tggtttacac
     1021 ctgtaagcag agttgctggc ctccaaatca gcagatgccc atggaagaat tctgtgttat
     1081 acaagaagac ccagatgcat ttttatttaa gtagaacact tcgtcttatt tatacaaatt
     1141 aaaacaagtt ttcatattca aatatttgta tgtttacctc actttagcat ctcccttccc
     1201 ttgagacagg gcctcactgt atgtaccctt agctggactt gagcttgtgg tgt
//
