LOCUS       NM_001134542            2031 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus prenylcysteine oxidase 1 like (Pcyox1l), mRNA.
ACCESSION   NM_001134542 XM_225891 XR_009470
VERSION     NM_001134542.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168676.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XR_009470.1, XM_225891.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168676.1, SRR8487231.32544.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..2031
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /note="prenylcysteine oxidase 1 like"
                     /db_xref="GeneID:307396"
                     /db_xref="RGD:1563290"
     exon            1..118
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..1515
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /note="prenylcysteine oxidase-like"
                     /codon_start=1
                     /product="prenylcysteine oxidase-like precursor"
                     /protein_id="NP_001128014.1"
                     /db_xref="GeneID:307396"
                     /db_xref="RGD:1563290"
                     /translation="MARAAPLLAVLATLLTAAAAGGDAPPGKIAVIGAGIGGSAVAHF
                     LQQHFGPRVQIVVYEKGTVGGRLATISVNKQNYESGAASFHSLSLHMQDFVKLLGLRQ
                     RREVVGRSAIFGGEHFVLEETDWYLLNLFRLWWYYGISFLRLQMWVEEVMEKFMRIYK
                     YQAHGYAFSGTEELLYSLGEATFVNMTQRSVAESLLQVGVTQRFIDDVVSAVLRASYG
                     QSASMPAFAGAMSLAGAQGNLWSVEGGNKLVCSGLLKLAKATVIHATVTSVTLHSTEG
                     KALYQVGYETDKGNSSDFYDIVVIATPLHLDNSSSNITFEGFTPPIDDIQGSFQPTVV
                     SLVHGYLNSSYFGFPDPKLFPFANILTTDFPSFFCSLDNICPVNISASFRRKQPQEAA
                     VWRVQSPKPLFRTELKTLFRSYYSVQTAEWQAHPLYGSRRTLPKFALHDQLFYLNALE
                     WAASSVEVAAVAAKNVALLAYNRWYQDLDKIDQKDLIHKVKTEL"
     exon            119..325
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
     exon            326..500
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
     exon            501..712
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
     exon            713..853
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
     exon            854..1926
                     /gene="Pcyox1l"
                     /gene_synonym="RGD1563290"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgcagcgtg ctgcctggtc accacccgcc atggcccgcg ctgccccgct gctcgccgtg
       61 ctggccacac ttctcaccgc cgccgctgca ggcggagacg caccgccggg gaaaatcgct
      121 gttattggag ctgggattgg gggctctgct gtggcccatt tccttcagca acactttgga
      181 ccccgagtgc aaattgtcgt ctatgaaaaa gggaccgtag gtggccgcct ggccaccatc
      241 tccgtcaaca agcagaacta cgagagcgga gctgcctcct ttcactctct gagcctccat
      301 atgcaggact tcgtcaagct gctggggctg agacagaggc gagaggtggt gggaaggagc
      361 gccatcttcg gaggagaaca tttcgtgctg gaggaaaccg actggtacct gctgaacctc
      421 ttccgcctct ggtggtacta cggcatcagc ttcctgaggc tgcagatgtg ggtggaggaa
      481 gtcatggaga agttcatgag gatctacaag taccaggctc acggctatgc cttctcgggc
      541 acagaagagc tgctctactc actgggggaa gccacctttg tcaacatgac ccagcgttcc
      601 gtggctgagt ccctgcttca ggtgggcgtc acccagcgct tcattgatga tgtcgtctcc
      661 gctgtcctac gggccagcta tggccagtca gcatcaatgc ccgcctttgc tggagccatg
      721 tcactagctg gggctcaggg caacctgtgg tccgtggaag ggggcaacaa gctggtttgt
      781 tctggtttgc tgaagctcgc caaggccact gtgatccatg ccacagtgac ctctgtgacc
      841 ctgcacagca cagaagggaa agccctgtac caagtggggt acgagactga caagggcaac
      901 agctctgact tctacgacat cgtggtcatt gccacacccc tgcacctgga caacagcagc
      961 agcaacatca cctttgaagg ttttactcca cccattgatg acattcaggg ctctttccag
     1021 cccactgtgg tctccctggt ccatggctac ctcaactctt cctactttgg tttccctgac
     1081 cctaagcttt tccccttcgc caacatactc accacagact tcccgagctt cttctgctct
     1141 ctggacaata tctgtcctgt caacatctca gccagcttcc ggcggaagca accccaggag
     1201 gcagcagtgt ggcgagtgca gtccccgaag cccctcttcc ggacggagct gaagaccctc
     1261 ttccgttcct attactccgt ccagacagcg gagtggcagg cccaccccct ctacggctcc
     1321 cgccgcaccc tcccaaagtt cgcactccac gatcaactct tctacctcaa tgccttggag
     1381 tgggcggcca gctccgtgga ggtggcggct gtagcagcta agaacgtggc tttgttggct
     1441 tataaccgct ggtaccagga cctggacaag attgaccaaa aggacttaat ccataaggtc
     1501 aagactgaac tgtgagggct ccgaggagag cccaggaact ctgtcccaca ctgaagatga
     1561 agcccactcc agcagcacag gactgactag gtcacattca cgggctgcgc ggctttctct
     1621 gcccttatat attgagcagg tccaggtgat ctgctgtctg cttatctaag gatcctctta
     1681 gaggctgcct attttcattt tttgagggag agattaagaa aagggaagca aattcaagtc
     1741 agtaggtttt tgggtttttt gctttgtttt gttttggttg gttgggtttt gttttgtttt
     1801 tttggggggg gtttggtttt gttttctgga gtttgggttt tgtttttgtt ggtgaatttt
     1861 tttttttttt ttttgggttt ggtttggtta ctgtttttca agaagaaata aaaatccatc
     1921 ctccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//
