LOCUS       XM_006255821            7219 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pecanex 2 (Pcnx2), transcript variant
            X1, mRNA.
ACCESSION   XM_006255821
VERSION     XM_006255821.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 11, 2024 this sequence was replaced by
            NM_001427189.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006255821.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7219
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7219
                     /gene="Pcnx2"
                     /note="pecanex 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 ESTs, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 34 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:307949"
                     /db_xref="RGD:1305883"
     CDS             222..6590
                     /gene="Pcnx2"
                     /codon_start=1
                     /product="pecanex-like protein 2 isoform X1"
                     /protein_id="XP_006255883.1"
                     /db_xref="GeneID:307949"
                     /db_xref="RGD:1305883"
                     /translation="MASQVLQLLRQGVWAALTGGWYHDPEHSKFTNSCHLYLWLFLLL
                     LPLALHLAFPPNLLTALFYCGSVTIFFTVIKLISYRLHLMFDKGEVIQHRSPRKRSKR
                     RPEGEASSQHPPRHKIPSNNRQIHSTKKEESRSLTTPPLCCSSRGQSVHSQHSSGPLE
                     LPAQETVEDLKGVVLSEDQPEALVSSTSPGMKSESLPASQGRTPEPTPRPPCPVKPVT
                     TEIFPARRVKESGGTAQRPARHRSESGLVNTEALKKLPHLSLSQYDLLETDISFQPWG
                     SEHSVLIPQPNCPHAPTRAQPQSRSPQDSQSSSFCQCNTVIAKPTEEELTRTSGQVEL
                     PSNPEVVDSDGEVEVTLIDTSQPGEPLSLHEPIRIVITMSSTPNSISDPESSLHLRVT
                     SSDRTGVRPNAENAGPGGADPADPEQARIPLITLELTEDGRGGGGPSCPEGNGGERTP
                     EKMEVMSPDRRSSSGVGECSTKDESPTPGPTFVPLTPRADPESEGSREGPANLDPASC
                     KSSHEKRHARVLSVDSGTDVFLSRSTKEVVSDSEKPIPTSKSDLEAKEGQIPNESNFL
                     EFVSLLESISTSKAVAPDSAAEQKGVNQGPEGHASPGIKEEAVENEKSNGRDPKPGKP
                     DLPSQDPASASPVLTQPPKTTALFQGSRQRHIIYRVTSQQDSSVLQVISGPETSVQEE
                     MSLDAMHIFIDEHGEVRSCYLKSGNQKEGSSQHPPLNPDCVSHAREILLSSSSTTTTG
                     SPDPSSGDPAVSALQQQLLLMVARRTQSETPRHVSQDLEDSSRSSAQGKFNREQFYKF
                     IIFPGKWIKVWYDRLTLLALLDRTEDVKENMVAVLLSVLVSLLGFLTLNRGFCRDLWV
                     LLFCLVMASCQYSLLKSVQPDPASPIHGHNQIIAYSRPIYFCMLCGLILLLDAGAKAR
                     HPPSYVVYGLKLFTPETLQSVRDHLIVFLCCFPAISLLGLFPQINTFCTYLLEQIDML
                     LFGGSAVSGITSAVYSVGRSVLAAALLHVFCFSAVKEPWSTQHIPALFSAFCGLLVAL
                     SYHLSRQSSDPSVLLSFIQCKLLPKCLHQNLDESAADPLPQRMKDSVKDVLRSDLIIC
                     SAAAVLSFAVSASTVFLSLRPFLSIVLFALAGTVGLITHHLLPQLRKHHPWMWISHPV
                     LKSKEYQQREARDIAHLMWFERLYVWLQCFEKYLLYPAIVLNAVTLDAFSISNYRRLG
                     THWDIFLMITAGMKLLRTSFCNPVHQFANLGFTVVFFHFDYKDVSESFLLDFFMVSIV
                     FTKLGDLLQKLQFVLAYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTFATSIFSTPL
                     SPFLGSVIFITSYVRPVKFWERSYNTQRVDNSNTRLAVQMERDPGSDDGSLNSIFYEH
                     LTRTLQDSLCGDLALGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLVTFQLRGLEFR
                     GTYCQQREVEAIMEGDEDDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEITRTQYILEG
                     YSIIDNNAATMLHVFDLRRVLIRYYIKSIIYYMVTSPKLASWVKNESLLKSLEPFAKW
                     HHIERDLAMFNINIDDDYVPCLQGITRASYCSVFLEWIQYCAGKRQELSKTLDHVDSD
                     EDSALVTLSFALCILGRRALGTAAHNMAMSLDSFLYGLHALFKGDFRVTARDEWVFAD
                     MDLLHKVVVPAIRMSLKLHQDQFTCPDEYEDPEILYEAIQSFEKKVVICHEGDPAWRG
                     AVLSNKEELLTLRHVVDEGANEYKVIMLHRGFLSFKVIKVNKECVRGLWAGQQQELIF
                     LRNRNPERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHKQLQSVWGGPI
                     TLNRVRTWFQTRWLRMRKDCSVGQRSGGNIEDGEGAVPPGGNAPSGESRDSSTEQPRK
                     GGTQQWASPRGEAPRAGRRKGRSQSVQAHSAISQRRPTLSSSGPILESHQAFLQTSTS
                     VHELAQRPSGSRPSLNTSAGSLHSQPPPVLTTGPYLGIQHQAEALIQSSLGSSTSSTL
                     SFLFGKRSFSSALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAAARHFSEPCEPID
                     SPEQGQLQDGRLAEAAGENPRGVLCRRASQEDMGLDDTASQQSTSDEQ"
ORIGIN      
        1 ttggacatgg cgcgcacctg cctggcagcc ccagccggct ccagcaccgc gctgtgccgg
       61 tccgtggtat tcagcgtctg ccgcggattg ggcggcggcg gcggcggggg cgggggcgcg
      121 actggagcac ccggttacgc accggcgtac tgagccccgg ggtgcttagc tcagggcgct
      181 gagccccagg gcgcccgcgg ctcctgccgg actcggcggg catggcgtcc caggtgctgc
      241 agctgctcag gcagggcgtg tgggccgcgc tcacaggggg ctggtaccac gacccggagc
      301 atagcaaatt caccaacagc tgccacctct acctgtggct gttcctgctc ctgctaccgc
      361 tggcgctgca cctggctttt cctccaaatc tcctcacagc gctgttctac tgcggctctg
      421 tgactatctt ctttacagtc atcaaactta tcagctaccg cctgcacctc atgttcgaca
      481 agggagaagt aatccagcac cgatccccaa gaaagagaag caagcggagg ccagagggag
      541 aagccagcag ccagcacccc cccaggcaca aaatcccaag caataacagg cagattcaca
      601 gcaccaagaa ggaggaatct cggagcctga ccacaccacc cctctgctgt agttcccgag
      661 ggcagagtgt ccactcccag cattcctcgg ggccattgga gttgccggcg caggagacag
      721 tagaagacct caaaggtgtc gttctgtcag aggatcaacc tgaggcactg gtgtcatcta
      781 cctcacctgg catgaagtca gaaagtctac ctgcttctca ggggcgtact ccagaaccca
      841 ctcccagacc gccatgccca gtgaagccag ttaccacaga gatcttccca gcaagaagag
      901 tgaaagagtc agggggcact gcccagcgtc cagcccgcca caggtccgag agtggcctgg
      961 tgaacactga agccttgaag aaattgccac atctgtcgtt gtcccagtat gacttactag
     1021 aaactgacat ctccttccag ccatggggca gtgagcactc agttctgatt ccacagccca
     1081 actgtcccca tgcccccacc agggcacagc cacagagcag atcacctcag gacagccaga
     1141 gcagcagctt ctgtcagtgc aacacggtca tagccaaacc cacagaggag gagctgaccc
     1201 ggacttccgg tcaggtggaa ctgccctcga acccggaagt ggttgactcg gacggcgagg
     1261 tcgaggtgac cctcatcgac acctcccagc ctggagagcc actgagtctg catgaaccca
     1321 ttaggatagt aatcaccatg agcagcaccc caaactccat tagtgaccca gagagctccc
     1381 tgcacctgag ggtgaccagc tctgacagaa ccggtgtcag gcccaatgca gagaatgctg
     1441 gcccgggagg agccgatccc gcagaccctg agcaggccag aatccctctc atcaccctcg
     1501 agttaactga agatgggaga ggaggaggag gcccctcctg tcctgaaggg aatggaggag
     1561 aaaggacccc agagaagatg gaggtgatgt cgcctgatcg tcgttccagt tccggggttg
     1621 gggagtgtag caccaaggac gagagtccca ccccaggccc cacgtttgtg ccactcacac
     1681 ccagagcgga cccggagtct gaggggagca gggagggccc agcaaacctg gacccggcct
     1741 cttgtaagag cagccatgag aaaaggcatg cccgcgtgct cagtgtggac agcggtaccg
     1801 atgtcttcct gagtaggagc accaaggagg tggtcagtga cagcgagaaa cccatcccaa
     1861 cctccaagtc agacctggag gccaaggaag gacagattcc aaatgaatcc aacttcctgg
     1921 agtttgtctc cctattggaa tccatcagta catctaaggc agtggcgcca gactctgcag
     1981 cagagcagaa aggagtaaat cagggtcctg aaggtcatgc ctccccaggg atcaaggagg
     2041 aagctgtgga gaatgaaaaa tccaatggac gtgatcccaa gccaggaaaa ccagacttgc
     2101 caagccaaga ccctgctagt gccagcccag tgctcacaca gcctcccaag accacagcac
     2161 ttttccaggg cagccggcaa cgacacatca tttacagagt gacttcccaa caagacagct
     2221 cagtgttgca ggtcatcagc gggccagaaa cgtctgtgca ggaggagatg tccctggatg
     2281 ctatgcacat tttcatcgac gagcacgggg aagtcagatc ctgttactta aagtctggaa
     2341 atcagaaaga aggctcttcc cagcatccac ccttgaaccc cgactgtgta tctcatgcca
     2401 gagagattct tctcagctcc tccagcacca ccactacagg aagtcctgat ccgtcctcag
     2461 gagaccccgc cgtcagcgcc cttcaacaac agctcttact catggtggct cggaggacac
     2521 agtcggaaac ccctcggcac gtcagtcagg atctggaaga ctcatcccgc tcttcagcac
     2581 aggggaagtt taaccgagag cagttttaca aattcatcat cttccctggg aagtggatta
     2641 aagtctggta cgaccgactc actctgttgg cgctgctgga tcgaactgaa gatgtgaagg
     2701 agaacatggt ggcagttctg ctcagcgtcc tggtttccct cctgggcttt ctgacactga
     2761 accgtggctt ctgcagagac ctgtgggtcc tgcttttctg tctggtcatg gccagctgcc
     2821 agtactccct gctcaagagc gtccagcctg accctgcctc accaatacac ggtcacaacc
     2881 aaatcatcgc ctacagcaga cccatatatt tctgtatgct atgcggcctt attttgcttc
     2941 ttgacgcggg ggccaaagcc agacaccccc ccagctatgt cgtgtatggc ctgaagctct
     3001 ttacaccaga gaccctgcaa tcagtcaggg accacttaat agtatttttg tgttgcttcc
     3061 ctgcgatctc cctcctcggg ctcttcccac agatcaacac cttctgcacg tacctccttg
     3121 aacagatcga catgttgctc ttcgggggtt ctgccgtttc cgggatcaca tcggctgtgt
     3181 acagcgtggg ccggagtgtc ctggcagcag ccctgctcca cgtcttctgc ttcagtgctg
     3241 tgaaagagcc atggagcaca cagcacatcc ccgcactgtt ctcagccttc tgtggcctcc
     3301 tggtcgcgct gtcctaccat ctgagccggc agagcagtga tccttccgtg ctcctgtcct
     3361 tcattcagtg caaattgctt cctaaatgct tacatcagaa cctggacgag tcagctgcag
     3421 accccctccc tcagaggatg aaggattcag tgaaggacgt cctgagatcg gacctcatca
     3481 tctgctccgc agctgctgtc ctctcctttg cagtcagtgc cagcactgtc ttcctgtcct
     3541 tacggccttt tctcagcatc gtgctctttg ccctggcggg caccgtgggg cttatcacac
     3601 accacctgct ccctcagctc cggaagcacc atccctggat gtggatttcc caccctgtgc
     3661 tcaagagtaa ggagtaccag cagcgggagg caagagatat cgctcatcta atgtggttcg
     3721 agagactcta cgtgtggctt cagtgtttcg aaaagtatct cttatatccc gccatagtcc
     3781 tgaacgctgt cacgcttgac gccttctcca taagcaacta caggaggctc ggcacccact
     3841 gggacatttt tctgatgatc accgcaggca tgaagctact gagaacgtca ttctgtaacc
     3901 cagttcacca gttcgccaac cttggtttca cagtcgtctt cttccacttc gactacaagg
     3961 acgtttctga gagtttcctc ctggatttct tcatggtgtc cattgtgttc accaagcttg
     4021 gagacctgct tcagaagctg cagttcgtcc tggcctacgt ggccccttgg cagatggcct
     4081 ggggctcttc cttccatgtg tttgcccagc tcttcgccat ccctcactcc gccatgcttt
     4141 tcttccagac attcgccacc tcgatcttct ccacacccct gagtccgttc ctcggaagcg
     4201 tcatattcat cacgtcctac gtcaggccag tgaagttctg ggagagaagc tataatacac
     4261 agcgtgtgga taattccaac acaaggctgg ccgtgcaaat ggaaagagac ccagggagtg
     4321 atgacggcag ccttaactcc atcttctacg agcacctgac gcggaccctg caggactcgc
     4381 tctgtggaga cctggctctt ggccgctggg gcaactacag ttcaggtgac tgcttcattt
     4441 tggcctcaga cgacctcaac gccttcgtcc acctgattga aatcggaaac ggtctggtca
     4501 cctttcagct tcgaggactg gagttccgag gaacctactg ccagcagagg gaggtggagg
     4561 ccatcatgga gggtgacgag gatgacagag gctgctgctg ctgcaaaccc ggccacctgc
     4621 cacacctgct gtcctgcaat gccgccttcc acctccgctg gctcacctgg gagatcacgc
     4681 gcacacagta catcctggag ggctatagca tcatcgacaa caacgcggcc accatgctgc
     4741 acgtgttcga cctccgcagg gtgctcatcc gttactacat caagagtata atatactaca
     4801 tggtcacttc ccccaaactc gcctcgtggg tcaagaatga atccctgctg aagtcactag
     4861 agccctttgc caagtggcac cacatcgagc gcgaccttgc gatgtttaac atcaacatcg
     4921 atgacgacta cgtcccgtgt ctccagggga tcacccgggc gagttactgc agtgtgttcc
     4981 tggagtggat tcagtactgc gcagggaaga gacaggagct ctccaagacc ctggaccatg
     5041 tggacagtga tgaagactca gctctggtga cactctcctt tgccctgtgc atcctgggaa
     5101 ggcgagctct gggaacagca gcacacaaca tggccatgag cctggactca ttcctctatg
     5161 gcctacacgc cctcttcaaa ggcgacttca gggtcacagc tcgagatgag tgggtgtttg
     5221 ctgacatgga cctactacac aaagtcgtcg ttccggctat ccggatgtcc ctgaaactgc
     5281 accaggacca gttcacctgc cccgacgaat atgaagaccc agaaattctc tatgaggcca
     5341 tccagtcctt cgagaagaag gtggtgatct gccacgaggg agatccagcc tggagaggag
     5401 cggtgctgtc caacaaggag gagctgctga ctctgaggca cgtggtggat gagggtgcca
     5461 acgagtacaa ggtcatcatg ctccataggg gcttcctgag cttcaaggtc atcaaggtga
     5521 acaaggagtg cgtccgggga ctctgggcag ggcagcagca ggagctcatc ttcctgcgca
     5581 accgcaaccc cgagcgcggg agcatccaga acaacaagca ggtcctgcga aacctcatca
     5641 actcgtcctg tgaccagcca ctgggctacc ccatgtatgt ctccccattg accacgtcct
     5701 acctgggcac ccacaagcag ctgcagagtg tctggggcgg acctatcaca ctgaaccgcg
     5761 tgaggacatg gttccagacg aggtggctga ggatgaggaa ggactgcagt gtgggccaga
     5821 ggagcggtgg caacattgaa gatggagaag gagctgtacc accaggcggt aacgccccca
     5881 gtggtgagag ccgggacagc agcacagaac aacccaggaa aggaggcacc cagcagtggg
     5941 cctcaccccg tggagaggct ccgagggcag gcagaaggaa gggcagaagc cagtccgtcc
     6001 aggcacactc agcgataagc cagaggcgac ctactctgag ctcctcaggt cccatcctgg
     6061 agagccacca ggccttcctt cagacatcca catctgtgca tgagctagcc cagagaccct
     6121 caggcagccg gccctccctg aacacctccg ctggatctct gcactcccag ccacctcccg
     6181 tcctcaccac aggcccctac ctgggtatcc aacatcaggc cgaggcactc atccagtcta
     6241 gcctgggctc ttcgaccagt tctactctca gcttcctctt tggcaaaagg agcttctcca
     6301 gtgcacttgt catatctgga ctctccgctg cagagggagg caacaccagt gacacccagt
     6361 catccagtag cgtcaacatt gtgatgggtc cctccgctag ggctgctgct cggcacttct
     6421 cagagccgtg tgaacccatc gacagcccag aacaggggca gcttcaagat ggacgcctgg
     6481 cagaggctgc aggggagaac ccacgggggg tgctgtgccg gagagcaagc caggaagaca
     6541 tgggcctgga tgacacggct tcccagcaga gtacctccga cgagcagtag tggaacacgc
     6601 gtctggtgga gaaatggcga ctcttccccc tgcgccaaag ccacgtggtt cttcctgagg
     6661 gccagggaga acagttctag aaaacgataa cgttatctca ggttctgaaa acactcgcac
     6721 accgtggggg ttgaagagaa gacattgtac ctcctccctc aagcaccgct tggaagtcgg
     6781 acacgtctca caaaagccat gttatatctt gaaacctcta gagtgtgtgg ggcccgtgac
     6841 tagctccttc ccgcgctggt taaagtagac cagctgcatg ctacgttctt tggcattcta
     6901 cacactgctg tcaccgtttg agagcacagg agtcacagct cctaggacag cagcgggagg
     6961 tcagaggccc tcgagcctgc ctcattcttt tatcacctct gcacagatgt aaatgcaagt
     7021 caccaacaac agcctggtgg tgcactggtc caagatgaga gtttagaggc aatacgatcc
     7081 tctctccagc tctggggcgc ccaggacccc tgcgtgcttc ccaggaatgc atgctccgtc
     7141 ttccaagctg acccagctct actgtacatg aacacatttg cacacacctt tgtcttaggg
     7201 attaaaatgt ttacagtta
//
