LOCUS       NM_001408739            2807 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus protocadherin beta 14 (Pcdhb14), mRNA.
ACCESSION   NM_001408739 XM_001055753
VERSION     NM_001408739.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Wu,Q.
  TITLE     Comparative genomics and diversifying selection of the clustered
            vertebrate protocadherin genes
  JOURNAL   Genetics 169 (4), 2179-2188 (2005)
   PUBMED   15744052
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Zhang,T., Haws,P. and Wu,Q.
  TITLE     Multiple variable first exons: a mechanism for cell- and
            tissue-specific gene regulation
  JOURNAL   Genome Res 14 (1), 79-89 (2004)
   PUBMED   14672974
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Jun 23, 2022 this sequence version replaced XM_001055753.7.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26643298.73657.1,
                                        SRR26643297.49881.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2807              JAXUCZ010000018.1  29431887-29434693
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p11"
     gene            1..2807
                     /gene="Pcdhb14"
                     /note="protocadherin beta 14"
                     /db_xref="GeneID:291647"
                     /db_xref="RGD:1307591"
     exon            1..2807
                     /gene="Pcdhb14"
                     /inference="alignment:Splign:2.1.0"
     CDS             179..2575
                     /gene="Pcdhb14"
                     /codon_start=1
                     /product="protocadherin beta-14 precursor"
                     /protein_id="NP_001395668.1"
                     /db_xref="GeneID:291647"
                     /db_xref="RGD:1307591"
                     /translation="MMKTSLHKAPQKRQVTAIIFLLLLWEAGSATIKYSVLEETDRGS
                     LVGNLAKDLGLSLRELVIRGAQILSKGNKQLLQLEQKSGNLLMKEKLDREELCGSTNP
                     CILPFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDEILLKIVESSHPGATFPLKIAQD
                     LDVGSNTVQNYTISTNSHFHVLTRNHSDGRKYPELVLDKALDREKQAQIRLTLTALDS
                     GSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQENSPVGSLVITVSARDLDAGTHG
                     ELSYSLFQSSNQVLRAFEINTDTGEIRVRKLLDFEETQSYRMEIEASDGGGLSGKCTV
                     VINVTDVNDNAPELTMSLLVSDIPENSPETVVAVFGISDPDSGDNGKMVCSIQDHLPF
                     LLKPNEDNFYTLVTERALDRENRAEYNITITVSDLGTPRLTTRHTITVQVSDINDNAP
                     AFTQTSYTMFVRENNSPALHIGTISATDSDSGSNAHITYSLLPPQDPQLDLDSLISIN
                     ADNGQLFALRAMDYEVLQAFEFHVSATDRGSPGLSSQALVRVVVLDDNDNAPFVLYPL
                     QNASAPYTELLPRVAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGE
                     VRTTRMLSERDVPKHRLLLLVKDNGEPPCSASVTLHVLLVDGFSQPYLPLPEVAHDPA
                     QEENALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARETSLGGCSVPDGHFPGHLVD
                     VSGTGTLSQSYQYEVCLTGGTGTNEFKFLKPVLPNFLNDEGYRNTEENSNFRDCLGFS
                     "
ORIGIN      
        1 gctgctgaga aaggaagctt tttacatttc tgccgatcga tcctttcgga aaggcagata
       61 agccgtgtcc agcaacatta aaaaagaaaa gaagctcaaa tttatatagc taagattcct
      121 gaattgttca caaagcaatt cttggagcat taactgctgc atcctttgga gcagaggaat
      181 gatgaagaca tcactccaca aggcaccaca gaaaaggcaa gtgaccgcca ttatctttct
      241 gttactactg tgggaggcag gcagtgcaac tattaagtat tccgttctag aggagacaga
      301 cagaggttct ttggtgggga acctagcaaa agatttaggg ctgagtttaa gggagttggt
      361 catcaggggt gcccagattc tttccaaagg gaacaaacag ctcctgcagc tggagcagaa
      421 gagtggaaat ttgctcatga aagaaaaatt ggatcgagag gagttatgtg ggagcaccaa
      481 cccgtgcatc ctacctttcc aggtgttact aaagagccca gtgcaattta ttcaagggga
      541 aatacagctt caagacgtaa atgaccatgc ccctgaattc atggaagatg aaattctcct
      601 taaaatcgtg gaaagcagcc atccaggtgc cacgttcccg ttgaaaatag ctcaagattt
      661 ggatgtgggg agcaacacag ttcagaacta tacaatcagc accaactccc atttccacgt
      721 tctcacccga aatcacagcg atgggaggaa atatccagag ctggtgctag acaaagcact
      781 ggaccgggag aagcaggcac agattagatt aacactcaca gctctggaca gtgggtcacc
      841 tcccaagact gggactactc aggttgtcat tgtggttctg gacattaatg acaatgcccc
      901 tgaatttgcc caagggctct atgaggtgca ggttcaagag aacagcccgg tgggctccct
      961 tgtcatcact gtatccgcaa gagatttaga tgctgggaca cacggagagc tctcctactc
     1021 gctttttcaa tcttcaaatc aagttcttcg ggcttttgaa ataaatacag acaccggaga
     1081 aattagagta agaaaactgt tggattttga ggaaactcag tcttaccgta tggaaatcga
     1141 ggcctctgat gggggaggcc tttcaggaaa atgcacagta gtaataaatg tgacggatgt
     1201 aaatgacaac gcacctgaac tcaccatgtc attactggtc agcgatattc cagaaaactc
     1261 ccctgaaacg gtagttgcgg tttttggaat ttcagatcca gactctggag acaatggaaa
     1321 aatggtgtgt tccatccaag accatcttcc tttcctcctg aaacctaatg aagacaactt
     1381 ctacacgttg gtaactgaaa gagcactgga cagagagaac agagctgagt acaacatcac
     1441 catcacagtc tcagacctgg gcacacccag gctcacaacc cggcacacca taacagtgca
     1501 ggtgtctgac atcaacgaca acgctccggc cttcacccaa acctcctaca ccatgtttgt
     1561 ccgtgagaac aacagccccg ccctgcacat aggcaccatc agtgccacag actcagactc
     1621 aggatccaat gcccacatca cctactccct gctaccaccc caggacccac agctggacct
     1681 cgactcgctc atttccatca atgctgacaa cgggcagctg ttcgcgctca gggcgatgga
     1741 ctatgaggta ctacaggcct ttgagttcca cgtgagcgcc acagaccgag gctcaccggg
     1801 gctcagcagc caggctctgg tgcgcgtggt ggtgctggac gacaatgaca atgcgccctt
     1861 cgtgctctac ccgctgcaga atgcctcagc gccctacaca gagctgctgc ccagggtggc
     1921 agagccagga tacctggtca ccaaggtggt ggccgtggac cgtgactctg ggcagaatgc
     1981 ctggctgtca ttccagctgc tcaaggccac ggaacctggg ctgtttagtg tgtgggcgca
     2041 caatggcgag gtgcgcacca ccaggatgct gagcgagcgc gatgtgccca agcacaggct
     2101 gttgctgctg gtcaaggaca atggagagcc tccgtgctct gcgagtgtca ctctgcacgt
     2161 gctgctggtg gatggtttct ctcagcctta cctgcctctg ccagaggtgg ctcacgatcc
     2221 tgcacaagaa gaaaatgcgc tgacactcta cctggtcatt gctttggcct ctgtgtcttc
     2281 tcttttcctc ctgtctgtgc tgctgttcgt gggggtgagg ctgtgcagga gggccaggga
     2341 gacctccctg ggtggctgct ctgtgcctga cggacacttt cctggccacc tggtggatgt
     2401 cagcggtaca gggactctat cccagagcta ccagtacgag gtgtgtctga caggaggtac
     2461 tggaacaaat gagtttaaat ttcttaaacc agtacttccc aacttcttga atgatgaagg
     2521 ttacaggaac acggaggaga attccaattt tagggattgt ttggggttta gctagaaatc
     2581 acaccttggc ctcatgtgat gtatatccac tgatgctttt ataatttcag tcatggaaag
     2641 aggtctgtat tagcgagata ctgatagtca tatttgtagc tgtttcagat tgtcgagtat
     2701 tccttgcaat tttttttgct agccatcttt ccctcaagca cacaatgtag gtgcaaaacg
     2761 ttcgtggact tgtatttatc acataaaaaa aggtttaata attaaga
//
