LOCUS       XM_017595009            1983 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X7, mRNA.
ACCESSION   XM_017595009
VERSION     XM_017595009.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017595009.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1983
                     /gene="Pcbp2"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 163 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:363005"
                     /db_xref="RGD:1309626"
     CDS             230..1552
                     /gene="Pcbp2"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X5"
                     /protein_id="XP_017450498.1"
                     /db_xref="GeneID:363005"
                     /db_xref="RGD:1309626"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL
                     AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQ
                     GAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQA
                     ASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLL
                     GMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 gtctctttcc cccttcctcc tcctccaccc cccctcctcc gcccgctagc ggggcccccc
       61 tcgccttccc gcccgcccct attgttccgc ccccggcctc ccgcccttcc ccttcccgcc
      121 cgctcccctt ttcccctcag tcgactcgcg cctccagttt ttggctttca ctctcaccag
      181 tgaccaaaga cttgaccact caaagtccag ctccctgtaa ctgctagaca tggacaccgg
      241 tgtgattgaa ggtggattaa atgtcactct caccatcagg ctacttatgc acggaaagga
      301 agttggcagt atcatcggaa agaaaggaga atctgttaag aagatgcgcg aggagagtgg
      361 tgcacgtatc aacatctcag aagggaattg tcctgagaga attataactt tggctggacc
      421 gactaatgcc atcttcaaag cctttgctat gatcattgac aaactggaag aggacataag
      481 cagctctatg accaatagca cagctgccag tagacccccg gttaccttac ggctggtggt
      541 tcctgctagt cagtgtggct ctcttattgg aaaaggtggt tgcaagatca aggaaataag
      601 agagagtaca ggggctcagg tccaggtggc aggggatatg ctccccaact caactgagcg
      661 agcaatcact attgctggca ttccgcagtc catcattgag tgtgtcaaac agatctgcgt
      721 ggtcatgttg gagactctct cccagtcccc cccgaagggc gtgaccatcc cgtaccggcc
      781 caagccctcc agttctccag tcatctttgc aggtggtcag gcctatacca ttcaaggaca
      841 gtatgccatt ccacagccag atttgaccaa gctgcaccag ttggcaatgc aacagtctca
      901 ttttcccatg acccatggca acaccggatt cagtggcatt gaatccagct ctccagaggt
      961 gaaaggctat tgggcaggtt tggatgcatc tgctcaaact acttctcatg aactcaccat
     1021 tccaaatgat ttgattggct gcataattgg gcgtcagggc gccaaaatca atgagatccg
     1081 tcagatgtct ggggcgcaga tcaaaattgc aaacccagtg gaaggatcta ctgatcggca
     1141 ggttaccatc actggatctg ctgccagcat tagtctggct cagtatctaa tcaatgtcag
     1201 tttagaaaac gctaaaccct cctcccaggc agcctccgtc acgatccctg atcacctcag
     1261 catcaacctc tctcaaccct ccaccccttc ttcttcttct tcctcctcca ccaccacccc
     1321 ctcgctcgcc acagcgggga cttccgacgc accctccagc ctccccaacc ctcttccgac
     1381 cgccccttgt gtctccagtc tgcttggcat gaaacccatc cctctcctgg ctctaaatgt
     1441 tgtgtctgct gctaagggta ccggggcttc agccaccacc accaccacct ctactgtgcc
     1501 atgtgtaact aacaaactga aaggcgagaa gcagagattc tctccctact gagtgcttat
     1561 cttggcattg cctcaagtgt tggtttattt tgtttttctt tgttaatatt ggtgagaacc
     1621 aaactattgt gagcttgtga ccattttctt tttactactt tgggggataa ctgggtgggg
     1681 tgggcacagg ggtgacactt gttaggttta ggtcttcaca gctcagtgcc tgcttcagag
     1741 tctgacttgt tgatggaact ctttatctag agccacagtt cttactctaa ttctgttaca
     1801 cttttttgta gctttattct gccttgcaat ataaacaatg tgttaggctc tgtgttgatg
     1861 aataaaagct tctcccttaa tccttccttt ttttacttta aatcatttaa tggttaaagc
     1921 tgtcagctgg ccttcttggt caaatctgtg tttctagtta taataaagtt gccacagtaa
     1981 gaa
//
