LOCUS       XM_017595006            2064 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X4, mRNA.
ACCESSION   XM_017595006
VERSION     XM_017595006.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017595006.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017595006.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2064
                     /gene="Pcbp2"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 163
                     samples with support for all annotated introns"
                     /db_xref="GeneID:363005"
                     /db_xref="RGD:1309626"
     CDS             230..1633
                     /gene="Pcbp2"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X3"
                     /protein_id="XP_017450495.1"
                     /db_xref="GeneID:363005"
                     /db_xref="RGD:1309626"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDL
                     EGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWA
                     GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI
                     TGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPS
                     LATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTV
                     PCVTNKLKGEKQRFSPY"
ORIGIN      
        1 gtctctttcc cccttcctcc tcctccaccc cccctcctcc gcccgctagc ggggcccccc
       61 tcgccttccc gcccgcccct attgttccgc ccccggcctc ccgcccttcc ccttcccgcc
      121 cgctcccctt ttcccctcag tcgactcgcg cctccagttt ttggctttca ctctcaccag
      181 tgaccaaaga cttgaccact caaagtccag ctccctgtaa ctgctagaca tggacaccgg
      241 tgtgattgaa ggtggattaa atgtcactct caccatcagg ctacttatgc acggaaagga
      301 agttggcagt atcatcggaa agaaaggaga atctgttaag aagatgcgcg aggagagtgg
      361 tgcacgtatc aacatctcag aagggaattg tcctgagaga attataactt tggctggacc
      421 gactaatgcc atcttcaaag cctttgctat gatcattgac aaactggaag aggacataag
      481 cagctctatg accaatagca cagctgccag tagacccccg gttaccttac ggctggtggt
      541 tcctgctagt cagtgtggct ctcttattgg aaaaggtggt tgcaagatca aggaaataag
      601 agagagtaca ggggctcagg tccaggtggc aggggatatg ctccccaact caactgagcg
      661 agcaatcact attgctggca ttccgcagtc catcattgag tgtgtcaaac agatctgcgt
      721 ggtcatgttg gagtcccccc cgaagggcgt gaccatcccg taccggccca agccctccag
      781 ttctccagtc atctttgcag gtggtcagga caggtacagc acaggcagcg acagtgcgag
      841 ctttccccac accaccccgt ccatgtgcct caaccctgac ctggagggac cacctctaga
      901 ggcctatacc attcaaggac agtatgccat tccacagcca gatttgacca agctgcacca
      961 gttggcaatg caacagtctc attttcccat gacccatggc aacaccggat tcagtggcat
     1021 tgaatccagc tctccagagg tgaaaggcta ttgggcaggt ttggatgcat ctgctcaaac
     1081 tacttctcat gaactcacca ttccaaatga tttgattggc tgcataattg ggcgtcaggg
     1141 cgccaaaatc aatgagatcc gtcagatgtc tggggcgcag atcaaaattg caaacccagt
     1201 ggaaggatct actgatcggc aggttaccat cactggatct gctgccagca ttagtctggc
     1261 tcagtatcta atcaatgtca gtttagaaaa cgctaaaccc tcctcccagg cagcctccgt
     1321 cacgatccct gatcacctca gcatcaacct ctctcaaccc tccacccctt cttcttcttc
     1381 ttcctcctcc accaccaccc cctcgctcgc cacagcgggg acttccgacg caccctccag
     1441 cctccccaac cctcttccga ccgccccttg tgtctccagt ctgcttggca tgaaacccat
     1501 ccctctcctg gctctaaatg ttgtgtctgc tgctaagggt accggggctt cagccaccac
     1561 caccaccacc tctactgtgc catgtgtaac taacaaactg aaaggcgaga agcagagatt
     1621 ctctccctac tgagtgctta tcttggcatt gcctcaagtg ttggtttatt ttgtttttct
     1681 ttgttaatat tggtgagaac caaactattg tgagcttgtg accattttct ttttactact
     1741 ttgggggata actgggtggg gtgggcacag gggtgacact tgttaggttt aggtcttcac
     1801 agctcagtgc ctgcttcaga gtctgacttg ttgatggaac tctttatcta gagccacagt
     1861 tcttactcta attctgttac acttttttgt agctttattc tgccttgcaa tataaacaat
     1921 gtgttaggct ctgtgttgat gaataaaagc ttctccctta atccttcctt tttttacttt
     1981 aaatcattta atggttaaag ctgtcagctg gccttcttgg tcaaatctgt gtttctagtt
     2041 ataataaagt tgccacagta agaa
//
