LOCUS       XM_039099156            5916 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phenazine biosynthesis-like protein
            domain containing 2 (Pbld2), mRNA.
ACCESSION   XM_039099156
VERSION     XM_039099156.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099156.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5916
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5916
                     /gene="Pbld2"
                     /note="phenazine biosynthesis-like protein domain
                     containing 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 6 Proteins, and 93%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100360692"
                     /db_xref="RGD:2321665"
     CDS             3978..4844
                     /gene="Pbld2"
                     /codon_start=1
                     /product="phenazine biosynthesis-like domain-containing
                     protein"
                     /protein_id="XP_038955084.1"
                     /db_xref="GeneID:100360692"
                     /db_xref="RGD:2321665"
                     /translation="MKLPIFIADAFTVTAFHGNPAAVCLLESTLDEDAHQHIAREMNL
                     SETAFVRKLQPTDNFTQSSRFGLRWFTPEAEFPLCGHATLASAAVLFHKRKNVNSTLT
                     FVTMSGELKARRAEDGIVLDFPLYPTFPQDFHEVEDLIKAAIGDTVVQDIRYSPDTKS
                     LQPRLSDSYDRSFLESLKVNTEPLPGIEKTGKVKGLILTVKGESGGQTTPYDFYSRYF
                     APWFGVPEDPVTGSTHTLLGPYWSEELGKKEMRAFQCSCRGGELDISLRPDGRVDMKG
                     GAAVVLEGMLTA"
ORIGIN      
        1 cccattacaa atggctgtga gccaccatgt ggttgctggg aattgaactc aggacctctg
       61 gaagagcagt cagtgctctt aaccgctgag ccatctctcc agctcttaca caaagtttct
      121 aggtggctaa agtaaccact ttaggcctcc tcaggtattc atgcttgtgg ttctagaata
      181 gattcagagt tgtttgtcta cctgtgcatt gctttctaga gttccaggaa caccccggag
      241 cttttctcct ttcttcttcc agtggaaacc cccttccagc attggagaaa tggctcagca
      301 gttaaaagca cgtactgttt tatgtttgtt ttgttgtcca ttgttctgag acagggtctc
      361 actatgtagc tctgaccatc ctagatcttt ctatgtaaac caagctagcc ccaaactcac
      421 agagatccac ctgcctctgc ctcctctgcg ctggaatcaa agatgtaggc catcatgcca
      481 ggttgcactt gctgttctgg ctgagcactt ggggtcaggt ctcagtaccc atgccaggca
      541 gctaagaaac ccctgtgaca ccacctccag gggatccggc atcctctttt tgccttttgt
      601 agatgcacac atgcacaccc attaaaataa gccctgaaag tagacctgtc acatcatctc
      661 atgtcatgct ggtgcttaca aacatttgct taaagccaat tgtttgcctc agtaacttgc
      721 ctacagctca ggcagaagtc atgttcttaa acagttggtt gactgttttt gacaaacaat
      781 tctggagaaa gaagctgttc ttactatgtg aaccaaatta ggttaataaa aaatccttgc
      841 tactgggggt ctgccaggaa agtagcacag aagccaagtt gtaattcatt gtggacatat
      901 cttatctttt tgggatttgg gagctgtcag actattccag aatgatgaag gtggtctcct
      961 cttcctcctc ctcctcctcc tctttttcct ccacagtaac tgactacttg ctgattggtg
     1021 gagggaaatt ttacacattt tgtgatccag caaataaggt gggttgtggg gttgagtagg
     1081 gaggaactta ttatttacaa gagaggagca gtgcagccca ggattgctcc aaactggctt
     1141 tgagtttctt ttccccctat ctcaacagga agccagaaga caggttctca ctagaacttg
     1201 ctatgtagac caggctggcc tcaaactcac agagatctat ctgctttcct ctgcttcccc
     1261 gaacaagcta cacatatatc tgctatgtca gatttaatgt attatattag ttccatcaca
     1321 tttaatccaa atattttatc tcctccatat agggcatatg atacagaata aatgcctttc
     1381 agggtttaac tgcattcgga aggaacaaac taagctactg tttacaagag ctgcacattt
     1441 aatttcctgt ttctgtaata aagggacatt ttcttttcct tgagatggca tttcactgtg
     1501 ttggccaggc tgcctttaag ctcctgggct taggcagatc cttttggctc agatctatgt
     1561 ctccccaaaa gctagaacaa tagacacaca ccaccattct caatttagga cacgtttttt
     1621 atgtctctat aaattctgtg actgttctaa cccaagattt taacaacact agaatttaag
     1681 tttggaaagg gtttttaatg gctgcttaaa ttaaaaaaaa aaagggacaa aagaaaaaat
     1741 atccctcata ggtataccca accacttagg ttttagttaa ttccagatgt agtcaagttg
     1801 tcaaattgac aaccaagaat agcggtcacg tatatgcaca ttagagatcc accattaaag
     1861 ctgggtggtg gtggtggatc cctttattcc cagcactcag gaggcaaagg caggcagatt
     1921 ttgtgagttt gaggccaggc agacctacag aataagttct aggacagcca ggactacaca
     1981 gagaaaccct gtcttaacaa caacatctat cattaaagat acctgccagc ttgggattta
     2041 gcttagttgt agagtatttg cctcacctgt ctgaggatct gagttattca atctccagta
     2101 atgtaatgta atataatata atatatataa aatatgcatg tgatattata tattatatat
     2161 aaaccattat gtgttatgta tatataacat atatattata catatataca catacacaca
     2221 tattttacct ggagtttgct aatccagaat aatcagttga ttgaacctaa ttacctcttg
     2281 ctagtaacaa aacatactta tgggtccttt ggcgaatcac tattctggcc gtctctgtac
     2341 taacaatggc ttcaaacttt gagactttta ctctgtatta ggcagaagtt cagaggtagg
     2401 accgcttaag gggcacccag caggttagct acagcaccag caagtgcact ctttccccat
     2461 atctcgtctc tgagccttct atctccttgc ttatcatggt gcaatgacca ggctgctgcg
     2521 tttctaggat caaaaatacg ttcagctcag caaaaaagga tgggcatcct attctcttag
     2581 ctctgttcct gttaaccaga aagcaaaact ttctccagga tctttctagc cttccttccc
     2641 tagttgagac ttgtcaccat gtagctgtag gaaatcttga aaactgacca tctgacaaag
     2701 ggaatgaaac tgtcctgaca gacagggacc ctgggcatcc ctgagccaaa acagaatcca
     2761 agtcctttaa agaagagaag ctgacactgg gtctgctgtg ggtggagggc ctgcgacatc
     2821 ttattgaata gtgaaagaca gcttgttaga tagaccctct gagacattca aagccagagc
     2881 tggatactgt agtatactgt taggcagtat acttgagccc tcgggtctca ggccagagtg
     2941 tgcagcctgg cgaggaaacc tggcccccac aactcctaga tagaaatcgg gaacttcgga
     3001 gctataaatt tggggctgga gagatggctc agtggttaag agcactgact gctcttccag
     3061 aggtcctgag ttcaattccc agcaaccaca tggtggctca caaccagact ataatctata
     3121 gtctggtgcc ctcttctggc ctgtagttgt atacatgcag gcagaaagct gtatgatgta
     3181 tacataataa ataaataaat taaaaaaaaa ggagttgtaa atttttgttt agcttgatag
     3241 agtccctggt ttctggggga ggtttgttat tgttgttgtt gtgtttttgt tctatttttg
     3301 ggggagatgg ggaaggggtt caatacaggg tttctccgtg taatcctggc tgtcttggaa
     3361 gtcactttgt agaccagcct gggcctcaaa ctcactgcct ctgcctcccc agtgctggga
     3421 ttaaaggtgt gcaccacaca tctgactgag tccctagttt taatcctcaa cacacacaca
     3481 cacacacaca cacacacaca cacacacaaa cacgcacgca cgcacgcacg cacacacaca
     3541 cacacacaca cacacacaca cacacacaca cacacacaca cacgcacacc atgtttggcc
     3601 ttgagagact ggaagacatg cacctctcag atgtctcatg aatttcgcta aagttactgc
     3661 ctcagctagt ttcagctact ctaggaaaga aggcgattat gttggggagt tctgttgggg
     3721 ttgagaggtg aatagactaa ggttaaaaat gtttcattca gctagtattt taaaacaaat
     3781 taaatgcaaa ggctttgaaa agtaggggtg cacacatctt taggtgcaaa gtatgttgga
     3841 gtaattgttt gactttttat ctgggaacta ttaacgatgt ctctacatgg agtaaaacat
     3901 taactttttt tcaacaacag gaagtgaagc gggctcccag caaggcaggc agctcccaga
     3961 cagagccagt gaggaagatg aagctcccga ttttcatagc agatgcgttc acagtgacag
     4021 ctttccacgg taatcctgcc gcagtctgcc tgctggagag cacattggat gaagatgctc
     4081 atcagcatat tgcgagggaa atgaacctct ccgaaacagc tttcgtccga aaactgcaac
     4141 caactgacaa cttcacacaa agttcccgat tcggactgag gtggtttacc ccagaggctg
     4201 agtttccctt gtgtggccac gccaccctgg cttctgcagc tgtgttgttt cacaaaagaa
     4261 agaacgtgaa cagcaccctg acctttgtca ctatgagtgg ggaactaaag gccagaagag
     4321 cagaagacgg gattgtcctg gactttcctc tctacccaac cttcccccag gacttccatg
     4381 aagttgaaga cttgataaag gcagccatag gtgacaccgt agtccaggac atccggtact
     4441 ccccagatac caaatctctc cagccccggc tcagcgattc ttatgacagg tcctttctag
     4501 agagcctgaa ggtgaacaca gagcctctgc ctggaattga gaagacagga aaggtgaaag
     4561 gcctcatcct cactgtcaaa ggagagtctg gggggcagac gaccccgtat gacttctact
     4621 ccagatactt tgcgccttgg tttggtgtac ctgaagaccc ggtaacaggg tccacccaca
     4681 ctcttcttgg cccctactgg tctgaggagc tggggaagaa agaaatgcga gcctttcagt
     4741 gttcctgccg aggaggggag ctggacattt ccctgcgacc tgatgggcgg gttgacatga
     4801 agggcggagc cgctgttgtc ttggagggca tgctgacagc ctagagatgc ttatgctggg
     4861 cttgcagctc aactcttctc tacagccaag aacccaaccc aacccaacca aacagcacca
     4921 agtggtgccc tcagtcctct cgtgaagacc agagaaggga agacatttga tggaggtgct
     4981 gaatcctctc ctgattctcc agaatcctct cctggtggtg gtggtgggct ccgggctctg
     5041 cctgtgtatg catcttcagt ccctatagca gacacggatg ctgtcccttc ttttgattat
     5101 gactgccaaa gcaagagatg cattgataag gagccagatg aaatttagat ttaggtgtgg
     5161 gtgtcttata gaagttttgt tttttttttt tcctgagaca gtttctctgt gtagccctgg
     5221 aactctgtag accaggctgc cctctggaac tctgtagacc aggctgccct ctaactcaca
     5281 gagatctgcc tgcctctgac tctagagtgt tggattaaag gcatgtatca ccaccaaaag
     5341 gtttctgata gattttacac acgcacgtat gtatgtatgt atgtatgtat gtatatatgt
     5401 atgtatgtat gtatatgtga attgaatgac agagtcttat ggtatagccc tggctgggaa
     5461 gaaactctat gtagatcagg ctcacctcca acttgacatc tgcctgccct gccttaagtg
     5521 ctaggttaat ggtgtgcccc atcatgccca aactcacaat ctttttaata gacccagtaa
     5581 ctctgtggaa ataatactaa agagagtgga cggtaaactg ctgcagaggc ttcactatgg
     5641 ctgtgttgaa tatggagtca cgtgactgta aagacagcaa gaggagacag ctcatgtgga
     5701 aagattcaaa ggaacatcaa tgtttaagaa acaaatcctt ttagaagtaa caatcaggac
     5761 aatcccagga aattaaaaca gtatgtattt gatttggttg tgtcatgata aatatacata
     5821 ctaagagtgt atgagccaaa atccttccct cctgtgtggc ttagaatggc aatgtcttct
     5881 gttgtttaat aaagcatgat ttaacagagc ttcgaa
//
