LOCUS       NM_001108818            1629 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus polysaccharide biosynthesis domain containing 1
            (Pbdc1), mRNA.
ACCESSION   NM_001108818 XM_001053847 XM_343808
VERSION     NM_001108818.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473969.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_343808.3, XM_001053847.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ225636.1, FQ220252.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1629
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /note="polysaccharide biosynthesis domain containing 1"
                     /db_xref="GeneID:363485"
                     /db_xref="RGD:1562502"
     exon            1..686
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
     CDS             657..1253
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /codon_start=1
                     /product="protein PBDC1"
                     /protein_id="NP_001102288.1"
                     /db_xref="GeneID:363485"
                     /db_xref="RGD:1562502"
                     /translation="MDAASESEEPVSGEALSIAHALSYPPESYGNDPDIEMAWAIRAM
                     QHAEVYYKLISSVDPQFLKLTKVDDQIYSEFRENFETLRIDVLDPEELKSESAKEKWR
                     PFCLKFEGIVEDYNYGTLLRLDCSQGYTEENTIFAPRIQFFAIEIARNREGYNKAVSV
                     SVQDKEGKEGADNKEEEAEKGADSGGEKEEGVNREGEK"
     exon            687..752
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
     exon            753..812
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
     exon            813..953
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
     exon            954..1065
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1629
                     /gene="Pbdc1"
                     /gene_synonym="RGD1562502"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaattcatcg tacaaagctc ctgattggac tatcttccag ctagactgtt ctttgcaagg
       61 tattttaatg ctttttcact aataccttta ccatccatgc tccctctgcc tccagtcttt
      121 ctgacctgct agcttaagcg cccatcatga ctcagctcag gtctgctccc agtgtatgat
      181 gatgctcacc tcgttgttac ctcactcagc tagttcttcc aaaagaggta gcaaatcctt
      241 cttcatctct gatttccccc atcctgcttc cagtacctag cctggcgtgc gggcgtgcgt
      301 gtggatgcgc tcgcgtgaaa tgggaacacg gcacacaggg gacttaaaaa cagcatcatt
      361 ttttaaaaaa tgtttaattt ttttcataca acttattttc cccattgatt tattgaatag
      421 tctaacacct tggctagagg aatagcgttg ctaagtaaca acacgccacc ttgtctggcg
      481 cctgcgtggc ccggataagg cggagccaca gcttcctctg caaagggagg gcacacgcag
      541 gcgcagacgg gaaagctggt ctccgtttcc gccctattgc tttcaattaa ctgttgaagc
      601 agcgcgcgca acaggtcact tccgggaagg ggaagccgca cttacctagc ggcaacatgg
      661 atgctgccag cgaaagcgaa gagccggttt ctggggaagc gttgtccatc gcccatgctc
      721 tttcttaccc tcccgagtca tatggcaacg accctgatat tgaaatggct tgggccattc
      781 gagcaatgca gcatgctgaa gtctattata aactgatttc atcagttgac ccacagtttc
      841 tgaaactcac caaggtggat gaccaaatct actctgagtt ccgggaaaat tttgagacac
      901 tcaggataga tgtattggac ccagaagaac tcaaatcaga atcagctaaa gagaagtgga
      961 gaccattctg tttaaaattc gaagggatcg tagaagatta caactatggt actttgctgc
     1021 gactggattg ttctcagggc tacactgaag agaacactat ctttgcaccc aggattcaat
     1081 tttttgccat tgaaattgct cggaaccggg aaggctataa caaagcagtt tccgtcagtg
     1141 ttcaggacaa agaaggaaag gaaggagctg acaataaaga agaggaagct gagaaaggag
     1201 ctgatagtgg aggagaaaaa gaggaaggag tcaacagaga aggagaaaag taaaaaacta
     1261 aacaagggag gagaaaaagt caagaaacct gtgactcagc tgaacccaca catgtctgtg
     1321 ctgctcacac agcccccatt ggttaaatga tgcccttgtg caagtggagg actcagaggg
     1381 acatctttct agctagcaag agaagctact ctgggcataa tagcttaaac acgattagtg
     1441 gagtctcttc gttcattatt gcttgatacc ttgtttcttg gctgtaactg ttgttgaaat
     1501 aagacatttt gtaaataaat tccttttggt ttattttact tatgactgac tttagaaagt
     1561 atttacattt atttgacact tcaaaaaatc aggtatatag tctcatcact atctcatata
     1621 aaactatct
//
