LOCUS       NM_001270387             452 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus prostate and testis expressed 5 (Pate5), mRNA.
ACCESSION   NM_001270387 XM_003750462 XM_003754401
VERSION     NM_001270387.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Rajesh,A. and Yenugu,S.
  TITLE     Genomic organization, tissue distribution and functional
            characterization of the rat Pate gene cluster
  JOURNAL   PLoS One 7 (3), e32633 (2012)
   PUBMED   22479333
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Oct 4, 2022 this sequence version replaced NM_001270387.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: JF412804.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676785
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               JAXUCZ010000008.1  42436008-42436172   c
            166-294             JAXUCZ010000008.1  42431225-42431353   c
            295-452             JAXUCZ010000008.1  42430917-42431074   c
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q21"
     gene            1..452
                     /gene="Pate5"
                     /gene_synonym="Pate-A"
                     /note="prostate and testis expressed 5"
                     /db_xref="GeneID:100362078"
                     /db_xref="RGD:2318904"
     exon            1..165
                     /gene="Pate5"
                     /gene_synonym="Pate-A"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..452
                     /gene="Pate5"
                     /gene_synonym="Pate-A"
                     /note="prostate and testis expressed protein A; prostate
                     and testis expressed family member-like"
                     /codon_start=1
                     /product="prostate and testis expressed 5 precursor"
                     /protein_id="NP_001257316.1"
                     /db_xref="GeneID:100362078"
                     /db_xref="RGD:2318904"
                     /translation="MGKLLFLLLLLGSFALVFIQVQATVCMVCNSFKSGHCLAGKSNC
                     TTRYKPGCRTRNFFLFSNTGKWVHNHTELDCHKACLAENMYLGALKISTFCCKGEDFC
                     NKYHGQVVKKKIY"
     exon            166..294
                     /gene="Pate5"
                     /gene_synonym="Pate-A"
                     /inference="alignment:Splign:2.1.0"
     exon            295..452
                     /gene="Pate5"
                     /gene_synonym="Pate-A"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcaactca gagaagagtc tgcaacctgc tctcatctac cctgacccct cctgagtact
       61 tgctaccagc tgttctcctg tgtcttctgg tagcccagac tgagatgggc aagctcctgt
      121 tccttctcct gctcctgggg tcatttgctc ttgtgttcat ccaagtccaa gctacagtgt
      181 gcatggtttg caactctttt aaaagtggac attgtttggc tggcaagagc aactgcacta
      241 caagatacaa gcctggatgc agaaccagga atttcttcct attctccaat acaggcaagt
      301 gggtccacaa tcataccgaa ttggactgcc ataaggcatg tctggctgaa aatatgtatt
      361 tgggagcatt gaagatatct accttttgct gcaaaggtga agatttctgt aataaatatc
      421 atggccaagt agtgaagaag aaaatttact aa
//
