LOCUS       XM_039108826            4229 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus poly (ADP-ribose) polymerase family,
            member 11 (Parp11), transcript variant X2, mRNA.
ACCESSION   XM_039108826
VERSION     XM_039108826.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108826.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4229
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4229
                     /gene="Parp11"
                     /note="poly (ADP-ribose) polymerase family, member 11;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 ESTs, 1 long SRA read, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 55 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:500323"
                     /db_xref="RGD:1561791"
     CDS             653..1648
                     /gene="Parp11"
                     /codon_start=1
                     /product="protein mono-ADP-ribosyltransferase PARP11
                     isoform X1"
                     /protein_id="XP_038964754.1"
                     /db_xref="GeneID:500323"
                     /db_xref="RGD:1561791"
                     /translation="MFHKTEEFFPKKTESDVDDMDTSDTQWGWFYLAECGKWHMFQPD
                     TNIQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLVTGKQRLIKRAPF
                     SISAFSYICENEAIPMPTHWENVNPDVPYQLVSLQNQTHEYNEVASLFGKTMDRNRIK
                     RIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRING
                     VHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVL
                     IGDYINGDSKYMRPPSKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH"
ORIGIN      
        1 cgtcgcctgt gtaacagcgc catcttgtgt tggaaataag caagacttcc agtcgcagag
       61 gaaaagagac cacccattct gtacccagaa aagacagatt ggaagaaact ccaagtcaaa
      121 tattgtatgc cccaagccat ctaggcaaga tttatacaac atcgtttttc aagcatggac
      181 gctttctgtc ctcactctga gtagaagacc agataactag agccgtggga aacatccttc
      241 agaagaataa aaaggaaagc actcaatgtg cgagatcata gtggaatttt ttttcctttt
      301 agtttcgctt tcttagaacc cctggcatgt tcagacatga acagtgtgac tagaaaatgt
      361 tcagagaaaa tgtgactaca ggcctttgga agaggtcaga catcaccctg cagggcaaga
      421 ctggtgccgg tgcaaggagc agaccgtaag ctgcatgcaa tgctctagca gaggctgagg
      481 gttctggttt tcccctcagc acagcgcttt ttgagaactg gttgccagtg aaatggccga
      541 gcggggtgaa cagtgctgga agaagaaagc aggagtgtgg aatagctaac gggacagtgg
      601 gtctttacat gttaagtcat cgtctttatt atctggtcaa aacacataag agatgtttca
      661 caagacagag gaattctttc ccaagaagac agagagtgat gtggatgaca tggacacatc
      721 ggacacacag tggggctggt tctacctggc agagtgtgga aagtggcaca tgtttcagcc
      781 ggataccaac attcaatgtt cagttagcag tgaagatatc gaaaaaagct tcaaaacaaa
      841 cccttgtggc tccatttcct ttactacttc caaattcagc tacaagatag actttgcaga
      901 aatgaagcag atgaatcttg tcactggaaa acagcgccta ataaaaaggg ctcccttctc
      961 catcagtgcc ttcagttaca tctgtgaaaa tgaggccatc cccatgccaa cacactggga
     1021 gaacgtgaat cctgacgttc cctaccagct ggtttccctg cagaaccaaa cacacgagta
     1081 taatgaagtt gccagtcttt ttgggaaaac aatggaccgg aaccgaatta aaaggattca
     1141 aaggattcaa aacttagact tatgggagtt cttttgcagg aaaaaggctc agctcaagaa
     1201 aaagagaggt gtcccccaga tcaatgagca aatgctgttt cacggcacca gcagtgaatt
     1261 tgtggaagca atttgcattc acaactttga ctggagaatc aatggtgtgc acggtgctgt
     1321 ctttggaaaa ggaacctatt tcgctagaga tgcggcgtac tccagtcgtt tctgcaaaga
     1381 tgacatcaag cacgggaaca cattccagat tcatggggtc agcttgcagc agcgacatct
     1441 gttcagaacc tataaatcca tgtttcttgc tcgagtgcta attggtgatt acataaatgg
     1501 agactcgaaa tacatgagac ctccttccaa agatgggagc tatgtgaatt tgtatgacag
     1561 ctgtgtggat gacacctgga accccaagat ctttgtggtt tttgatgcca accagatcta
     1621 ccctgagtac ctaatagact tccactgacc ctgcctccca ggctcagtgg tcaaagcttt
     1681 gctctctcac cgcaggagga cttgaccccc tgtctagccg ctaatagaaa tattggatac
     1741 ttttgaaaca gatacagaaa agaatgcggc ctaagtatat aaagaagtac tggctgtcag
     1801 gttggttata tgttgttctg tttctgtctg ttccggtttt gtcaaagacc gatgctgttg
     1861 ccaccttaac atataggaga gagaggtact tctcaaagcc gagtaggata agtctcatta
     1921 ccatggccag gcagacttca aagtacacac acacatgtga ccgggtcaaa tgattttagt
     1981 ttttgtaccc tattaggaca actggccctt tataaattga attttggcat tactatctat
     2041 caatgagcat gtgactttgt tggcccttct gagggggtat ttaaaacccg gaaacagccc
     2101 ctggtgctca gcgaagtaag aaacaaagga caccgtctgc tgtgctagga gacaagctag
     2161 cagaagagag accaggacag agcctgcttc ccactgctat aggaaggcgg tctgtaaccc
     2221 cagagcagcg cacacccttc tcacacacct cccacagttg agctgaccac tgccacggag
     2281 ggtcagtagc tcccagtgca gccctccagc agtctgtggt ccatgctcac attatttatt
     2341 tcttcatttc caagccctgc agtgatcact cctaagaggt tttatcggtc ctgccacaac
     2401 ccctgagaga cacatagctg ttccccagtg attcctaaga tccacgcgtg ttggtgggtg
     2461 gtatctttct gttttgaacg attgcagaga acatgagatg ctgggtagaa gtctgatttc
     2521 tcctttagag tagtgattga cagcttccaa cccatgagca gctacgtaca acttagaatt
     2581 gtactcacgg cttggtgtac tggtctcctt gcctgctgtt ctgtcctgaa gatgtagatc
     2641 tgtaccagct aactgcccgt tggtgtccta gcagagactc aggcatgatg ctgtctaggt
     2701 gttcaagtat cagacaggga gctgcctgga tgattgtctc ctcagcgctg ctttttccat
     2761 gattccttat gggaaagacc gtttcctcca gcccttcacc cagaaccttt tcctaactct
     2821 tactactgaa tctcgtctcc agtatcccca tccagctctg ggtgcaagta agtgaacaca
     2881 tttagcttct agtgcctcca tgtgtattgt gctcttccat ctctcaaatc cggaagcatc
     2941 tagaagtaat atgtgtgtgg aacaggatta gggacaatgg ttcttttttt tttttttttt
     3001 tttttttttg gttctttttt tcggggctgg ggactgaacc cagggccttg tgcttcctag
     3061 gcaagcgctc taccactgag ctaaatcccc aaccccaggg acagtggttt taaggatggc
     3121 aattctttca gcttcgtatg tcaccaggtt ttccttatag cccggaatga gagtaattgt
     3181 gcagtaggaa gtacctgaac ggcactcggg aaaacgtgtg cacagtgctg cggcacatcg
     3241 tggcagccat gatgtcctgg ctcagatgtg tcggcccgcc attggtttaa gaacggatag
     3301 gaaggacaca tttcaaaacc aacagtggtc cctgcagaag tgcctgaatg cctgctcgcc
     3361 cacagaatca gtgttagggg cattaggagg tcagaccaaa cagtctctct cctagctctt
     3421 ttcttctatt tttgtttttt ttttgtgtgt ttgtttgttt gtgtttgttt gtttttctag
     3481 acagggtttc tctgtgtagc cctgctgtct tggaactctc tctgtagacc aaactggcat
     3541 gcgacgtgtt tgtccctctt acgtggctgt ctccctctgc ccagttccag gcacacttct
     3601 cttaatactt gaatggaatg tagttggggt tgtttccttt tagacttgtg tatctgtgcc
     3661 aaggtgactg agaacgcagg cagtctgtgc agtcaccctc cctcgttggc ttgcatgaag
     3721 aaggtggggt tgtgtcacag tgaccaccgt cagaaagcat tgcactgctg ttgttggaag
     3781 ggactgccag cctcccctcc tttaaaagga agaagtgatt tcagtatgtg ttttaaaata
     3841 taataatgta gaattcactc gtgttaaagt tttactgcct tgtctgttac atgtatagaa
     3901 gggtcttatc ccctctgcgc atccagtaga gtgggaggga gagtaaaggg agccgttaca
     3961 gagtggcacg ctatgccacc gagctggctg aataaactcc attgagtaca aacctgtctt
     4021 ttttctctgt ggggagtcta gccttggggt aaaaaataaa tgtgtttatg ggaaaacatt
     4081 ttcctaaatc ttttatctcc caccaggaat gtttgagatt agtggattac ttcatttcta
     4141 gactggtggt ggtggtgatg gagatttctc atatttaatg tctgagtgta ttgtttctat
     4201 aattgttgat taaagttttc tgtatcggg
//
