LOCUS       NM_001191808            8382 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus par-3 family cell polarity regulator beta
            (Pard3b), mRNA.
ACCESSION   NM_001191808 XM_237215
VERSION     NM_001191808.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 8382)
  AUTHORS   Izaki T, Kamakura S, Kohjima M and Sumimoto H.
  TITLE     Two forms of human Inscuteable-related protein that links Par3 to
            the Pins homologues LGN and AGS3
  JOURNAL   Biochem Biophys Res Commun 341 (4), 1001-1006 (2006)
   PUBMED   16458856
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000214.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001191808.3.
            
            On Oct 17, 2022 this sequence version replaced NM_001191808.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-534               JACYVU010000214.1  19033482-19034015
            535-636             JACYVU010000214.1  19174185-19174286
            637-808             JACYVU010000214.1  19418015-19418186
            809-918             JACYVU010000214.1  19493258-19493367
            919-1007            JACYVU010000214.1  19550571-19550659
            1008-1094           JACYVU010000214.1  19563447-19563533
            1095-1220           JACYVU010000214.1  19568601-19568726
            1221-1579           JACYVU010000214.1  19570112-19570470
            1580-1719           JACYVU010000214.1  19573093-19573232
            1720-1848           JACYVU010000214.1  19575440-19575568
            1849-2034           JACYVU010000214.1  19614335-19614520
            2035-2205           JACYVU010000214.1  19627283-19627453
            2206-2338           JACYVU010000214.1  19631530-19631662
            2339-2438           JACYVU010000214.1  19639027-19639126
            2439-2554           JACYVU010000214.1  19647181-19647296
            2555-2599           JACYVU010000214.1  19683204-19683248
            2600-2806           JACYVU010000214.1  19752284-19752490
            2807-3044           JACYVU010000214.1  19753215-19753452
            3045-3155           JACYVU010000214.1  19854143-19854253
            3156-3452           JACYVU010000214.1  19895637-19895933
            3453-3588           JACYVU010000214.1  19947263-19947398
            3589-3668           JACYVU010000214.1  19994915-19994994
            3669-8382           JACYVU010000214.1  20046645-20051358
FEATURES             Location/Qualifiers
     source          1..8382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q32"
     gene            1..8382
                     /gene="Pard3b"
                     /note="par-3 family cell polarity regulator beta"
                     /db_xref="GeneID:301455"
                     /db_xref="RGD:1584992"
     exon            1..534
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             415..4026
                     /gene="Pard3b"
                     /note="par-3 partitioning defective 3 homolog B"
                     /codon_start=1
                     /product="partitioning defective 3 homolog B"
                     /protein_id="NP_001178737.1"
                     /db_xref="GeneID:301455"
                     /db_xref="RGD:1584992"
                     /translation="MKVTVCFGRTGIVVPCKDGQLRVSELTQQALQRYLKTRDQDPGY
                     WVKIHHLEYTDGGILDPDDVLADVVEDKDKLIAVFDEQEPLQKIESPSGNPVDRQSPD
                     AFDTEVAAQLAAFKPIGGEIVVTPSALKLGTPLLVRRSSDPAPGPHADAQPSTASPSG
                     QSLKPVVLDSAQNLENRDVMNGEQTGLLMLHKTKNELSDMTRAVEISGEGDPLGIHVV
                     PFFSSLSGRILGLFIRGIEENSRCKQEGLFQENECIVKINNVELLDKTFAQAQDVFRQ
                     AMKSPSVVLHVLLPQNREQYEKSVIGQLNIFGNNDSASRTKAPPPTRGKAGLKAVNPT
                     RANSPEGEESPSPQQSKSPRVPRLGRKPSSPSLSPLMGFGSKKNAKKIKIDLKKGPEG
                     LGFTVVTRDSSIHGPGPIFVKNILPKGAAVKDGRLQSGDRILEVNGRDVTGRTQEELV
                     AMLRSTKQGETVSLVIARQEGSFLPRELKGEPDCYALSLESSEQLTLEIPLNDSGSAG
                     LGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEA
                     METLRRSMSMEGNIRGMIQLVILRRLERPLEEISECGALSRPCFENCQEALSASRRND
                     SSLLYPCGTYSPQDKRKDLLLPSDGWAENEVPPSPPPHPSLEWGLEDFSHSSRVDSTG
                     YFPDQHVNFRIVTPVGQPESINLKASKSMDLVPDESKVQSLADRRSDSPGKDFGPTLG
                     LKKSSSLESLQTAVAEVRKNDLPFHRPRPHMVRGRGCNESFRAAIDKSYDGPEEAEAD
                     GLSDKSSHSGHTALNCESAPQGNPELDDVENKAKNVKKTKEKEKKKGKGKMKVKEKKQ
                     KEEHEDTERKMKRKGFGAMLRFGKKKDDKVGKTEQKGTQKSGHPGEEELERMKEERER
                     IGAKHQELREKQARGLVDYATVATGPVHDIDDDEMDPNYARVNHFREPCTSANVFRSP
                     SPPRAGTLGYPRDGRPLSPDHLEGLYAKVNKPYHPPALADSGRPMAGTTDRIQKLRKE
                     YYQARREGFLLYEDEEGVTRPSDYDLHWVSGKGPDGSAHNLRFEGMERQYASLPRGGS
                     ADPVDYLTASPRGRYNERELPYYPGPHPVHSPRGSYPRPPDLRVTDLRYPQYYPPPPA
                     HQHKGPFRQDVPPSPPQHQRVPVYQEMGRAGPRGGSPDQYPYRNQDPRQKNPMTAAV"
     exon            535..636
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            637..808
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            809..918
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            919..1007
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1008..1094
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1220
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1579
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1580..1719
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1720..1848
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1849..2034
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2035..2205
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2206..2338
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2339..2438
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2439..2554
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2555..2599
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2600..2806
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            2807..3044
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            3045..3155
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            3156..3452
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            3453..3588
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            3589..3668
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
     exon            3669..8382
                     /gene="Pard3b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagcgccgc gcgcgtcgga ggagttggga gccggcgcaa aagtttcctc ccaactccgg
       61 ccccgcgcgc cgccgccgcc gcccactcca gcccggggcc tggggccggc cctgccacag
      121 tcgccagggc caccgccaga ggcagggccg ggccgggccg ggccgcgccc gcagtttcac
      181 tttggcgcgt ggagcctctg actgcacccg gccgaccctc cgcgtccccg cgtctccgcg
      241 cccgtgttcc cgccctcggc ctcccgtggg gctgcagggg agcagccgtg ggtccgggcc
      301 ccggaggcac gcgccagaca gcgtcgtatc cgcctcaggt ccccggactg aggggctgcg
      361 cccggggggc aggcacctgt tcggcccggc cccgcgcggg agccgggggc caggatgaaa
      421 gtgacagtgt gcttcgggag gaccggcatc gtggtgccct gcaaggacgg ccagctgcgc
      481 gtcagcgagc tcacccagca ggcgctgcag cggtacctga agacccggga ccaggatcct
      541 ggatactggg tgaagattca tcacttggaa tacacagatg gaggaatcct ggatccagat
      601 gatgtcttag cagatgtcgt tgaagataaa gataagctga ttgctgtgtt tgacgaacaa
      661 gagccactcc aaaagattga gagccccagt ggaaaccctg tggatcggca gagcccagat
      721 gctttcgaca cagaagtggc tgcccaactg gctgcgttta aaccaatcgg cggggaaatt
      781 gtagtaaccc cttctgctct gaagttaggc actccgctgc tggttaggag aagcagtgac
      841 ccagcaccag ggccccatgc tgatgcccag ccaagcactg caagccccag tggccagagc
      901 ttgaaacctg ttgttctgga ttctgcccag aacttggaaa acagagacgt tatgaatggt
      961 gaacagacag ggctacttat gctgcacaaa acgaagaatg aactgagtga tatgacgaga
     1021 gctgtggaga tttctgggga aggagatccc ttggggatac atgtggtgcc cttcttttca
     1081 tccctgagtg gcaggatcct aggactcttc atccgaggca tcgaagaaaa cagcaggtgc
     1141 aagcaggagg gactatttca ggaaaacgaa tgcattgtaa aaatcaacaa cgtggaactc
     1201 ctggacaaaa cttttgctca ggcccaagat gtcttccgtc aggcaatgaa atctcccagt
     1261 gtggtcctcc atgtgcttct gcctcaaaat cgtgaacaat atgaaaaatc agtcattgga
     1321 caactgaaca tttttggcaa caatgacagt gcttcaagaa caaaggcacc acctcccacc
     1381 cgtgggaaag cagggctaaa ggcagtaaat ccaacaagag caaacagccc tgaaggagag
     1441 gagtcacctt ccccgcagca aagcaagagt ccccgagttc caagattagg aagaaaacct
     1501 tcctctccct cactctcccc tctcatgggg tttggcagca agaaaaatgc aaaaaaaatt
     1561 aagattgacc ttaagaaagg ccccgaagga cttggtttca ctgtggtaac tagagattct
     1621 tctatacatg gtcctggtcc catttttgta aaaaatatcc taccaaaggg agcagcagta
     1681 aaggatggcc gcctacaatc aggagacaga attttagagg taaatggcag agatgtcaca
     1741 ggaagaaccc aggaagaact tgtggccatg ctgaggagca ctaagcaggg agagacggta
     1801 tcactggtca ttgcccgcca agaagggagc ttcctgcccc gagagctgaa aggagaacct
     1861 gattgctatg cactctccct ggaatcaagc gagcagctca ccttggagat ccccctgaat
     1921 gattccggct ctgctggtct tggagttagc ctgaaaggga ataaatctcg agaaactggg
     1981 actgacttgg ggatttttat caaatccatc atccatggag gtgctgcttt caaggatggc
     2041 cgtctccgaa tgaatgacca actgattgct gttaatgggg aaactcttct gggaaagtcc
     2101 aaccatgaag ccatggaaac actgaggaga tccatgtcca tggaaggaaa catccggggc
     2161 atgatccagt tagtgattct gaggagactg gagagaccac tggaggagat ttcagaatgt
     2221 ggagcacttt ccagaccatg ctttgagaac tgtcaagaag ctctgagcgc ctccaggcga
     2281 aatgatagta gtttattata tccgtgtggc acctatagtc cacaagataa aaggaaagac
     2341 ctattgcttc ccagtgatgg gtgggctgag aatgaagtac cgccgtcccc gccaccacat
     2401 cccagtctgg aatggggcct tgaagacttc agtcacagct ctagagtgga ttccacagga
     2461 tattttccag atcaacatgt caatttcaga attgtgacac cagtcgggca gcccgaatca
     2521 attaacctga aagcctccaa gagcatggac cttgtgccag acgaaagcaa agtccagtca
     2581 ctggctgatc gcaggtcaga ctctccaggc aaagattttg gtccaaccct gggcctgaaa
     2641 aagtccagtt ccttggagag cctacagact gctgtggctg aagtcaggaa gaatgatctg
     2701 cccttccaca gacccagacc acacatggtg cgaggccggg gctgcaatga gagcttccga
     2761 gcagccattg acaaatctta cgacgggcca gaagaggcag aagctgatgg tctgtctgat
     2821 aagagctctc actcgggcca cacagctctg aattgtgagt ctgcccctca gggaaaccct
     2881 gagctagatg atgtggaaaa taaagccaag aacgtcaaaa aaacaaaaga gaaggagaag
     2941 aaaaaaggaa agggcaagat gaaagtcaag gaaaaaaagc agaaagagga acatgaggac
     3001 acagagagga aaatgaagag gaagggcttc ggcgccatgc tgagattcgg aaagaagaaa
     3061 gatgataaag ttgggaaaac ggaacagaaa ggtacacaga agtccgggca cccaggagaa
     3121 gaagagctgg aaaggatgaa ggaagaaagg gagaggattg gagcaaaaca tcaggagcta
     3181 agagaaaagc aggcgagagg ccttgttgat tatgccactg tagcgactgg accagtgcac
     3241 gatatagacg acgatgaaat ggaccccaat tatgccagag tgaaccactt tcgggaacca
     3301 tgcacatcag caaatgtctt tagatctcca tctcctcctc gagctggaac acttggttac
     3361 cctagggatg gacgcccact gtctccagac cacttagagg gtctctatgc caaggtcaac
     3421 aagccatatc atccaccagc cctagctgac agtggacgac ccatggcagg aaccactgac
     3481 cgcatccaga agcttcggaa ggagtactac caggctcgga gagaagggtt ccttttgtat
     3541 gaagacgaag agggagtaac aaggccgtct gactatgacc tgcactgggt gtctggaaag
     3601 ggtccagacg ggagcgcaca caacctccgc tttgagggga tggagcggca gtatgcatcc
     3661 ttacccaggg gaggctcagc agatcctgtg gactacctga cagcttcacc ccgagggcgc
     3721 tacaatgaaa gagagcttcc atactaccca gggcctcatc ctgtgcattc cccaagaggg
     3781 agctatccca gacccccgga tctgagggtg accgatctac gatacccaca gtactaccca
     3841 cccccaccag cccatcagca taaaggaccc ttcagacaag atgttcctcc gtcaccacct
     3901 cagcaccaga gagtaccagt ctaccaggag atgggcaggg cagggccccg agggggcagc
     3961 cctgaccagt acccctatcg taaccaggat cccaggcaga agaatcccat gactgcagca
     4021 gtatagctga acatcccaga gatctgccaa gcaaggaaga tatccaacat catctttgcc
     4081 attgctagaa cctaaggcct tctccgggct aaggtgtccc atggtacagc atggctcttg
     4141 cttcctgagg atgcatggcc taactgtatc agaggagaaa aaagggacaa gggtgtgggg
     4201 atatggattc aaaaaggaag aaggatacga tcataaaaac agtatttcct gatacttgaa
     4261 aggcttgcag aatcggttga tttggtgaga aagacaattg attgaaaatc aatagagcta
     4321 cactatagta gcccctggct agaaaatcag cgctacttac aacccttaca accccacacc
     4381 ccacacccca caccccacac cccacacccc acaccccaca ccccacaccc cacaccccac
     4441 accccacacc ccacacacag tagaagcaat agtacagagg caagagtctc tctctctctc
     4501 tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc tcagtcaggc
     4561 ctagtcaccc gttcagagac tcagccctat ccttggaggt gtgggaccta ccaactggca
     4621 gagtagagag gctgcaaata ggcatcttca gaagcacaat gttctcactg aacacaaagc
     4681 aaccacatac acgactagtg acctcttgga aaccctagac ccaaaggaag actgtatttc
     4741 cttatttaca gtctagcttg ggttcccggt actacttgtt tgatacaagc cttttgcact
     4801 tccttgcttt tgatataaag gacagtaatt tgaattcgaa tgcagtatta gtgtcctggg
     4861 aggatgtgag ctggtcagag cttccagaag gcaattcttt ccaagcacca cagtgagcag
     4921 gggaagaagg ttgatgcccc atggtccttg ctttcctccc tcctcgtccc tggcacgctt
     4981 gcttggagat agctcctttc agagtcttcc tcaaatgcct ataattacct tagccttcca
     5041 cttaagggct caagaatacc tgtgagtggg gtgtgtaaag aaaacagagc ctgctgccca
     5101 ggccacacga gtgtcagttc tagacacagt gccgaacagt acccatctgc cctgggacag
     5161 caagtagatg gaagtgtgtg cgtgtgtgtg tgcgcgcgcg tgtgtgcgtg tgcgcgtgcg
     5221 tgcgcacatt caaacacatg tgacttgcag tatggagaag agaagagaaa attgccttct
     5281 ggatgtttaa tgaggaagga gtcaggcagg gaagtgaagg gagaagatgg taagattgaa
     5341 tcagtctgca tctgctcact ctcattaaca aatgtcaggg caaagctaag gtcttcgccg
     5401 gatttaaaag gaaaggtatt ctggctcagg aaactgaaaa gccacccttg cttccttgga
     5461 gctctcctat gcgtgtaaca cagcatctga agcttcctgt gtgtgcgtgc gcagactgac
     5521 acagcagaaa cagcccagca ttgggggttc ccagagaccg attcgtagtt taaacctttc
     5581 acattcccac ttcaccccac ccctccaaaa agcctttagt tcaatataga catattttgg
     5641 ctgaaagtag aataccactg accaaaccgt tttactgaat tgtagtgttc tagatccgta
     5701 gagtagtcat tcggtccaat tgttcttcct ttttttaatc taaaatattt ttgtgaccag
     5761 gaatgatgca agtgctggtt tttgacgtaa atagcatcat ttgctggact taggagagat
     5821 ggttatcgaa accacaattg ccgtggccct ctgaaaaata gactgtcgag ttgctttctg
     5881 tccttcgcca tctctcttca gccagcaacc ttaaatcata tgtaatttgt tcaatggagc
     5941 agaggacccc aggctctgat taacaagtta ttgtggctac actctagggt ccctggccac
     6001 catgctggaa atggcctttc ctttgagcca aggaatcctg aaagaaaaat gcagtgtgga
     6061 attgacgggt gtggggagca ttaaatcaac tcttaagcca ggaatggtac catgtgtcta
     6121 gaatcccagc aatcaggaag ccaaggcagg aaggatttga ggtggaagct agcctgaact
     6181 ctaggtttta agatcatata acaagaccct gtattttttc taaaaaacat cactcttcat
     6241 tgtgttctat attttcctca gatttctgta aagcattgat tttatccacg gcacaagttt
     6301 ccccttataa ggaggctaga taggccactt gcaggctggc caggggtagg tgacagtggt
     6361 gtgctacaga gaacttggca cttgaggata actgctctgc tcatgggttc cagctccaac
     6421 acgctcaccc tgattgcaca gcacccctac gtgcaggctt cagaaaagct tctccagacc
     6481 ttggctttgt gttgtacaca gtcaatccaa tagctgctaa tcctgagaag cccacagagg
     6541 tccaaatgta ttattaaaga gaacaacaac aaaagtcaaa tgaaacagct ttctgttctt
     6601 gcttaaagta tagcattcac tgcatctgat tctaccctaa agaactaaca ttgtgtttgt
     6661 gaccaaggct gcatcaagcc aagcaatggt taagaacagc tggggcagta ggctttatca
     6721 gtgcctgtgt agcatccaac tgtctcccct ccactgctgt aagaccgttt tttccaaggc
     6781 tccagcaaag catgtggctg tctggaaggc caggccatga tcagcaggtc ccccaggaga
     6841 gagaaatagc tatcagtatg tttacagcct tgggaaaact cattagggaa tctctctgta
     6901 gctgggaact ctaacagaga gaaatagttt ttaacaagag ctacaaacct gctactgggc
     6961 ccttcttcgc cccctttttg tatgactaga aagatatgag agaggagatc cactgaaagc
     7021 ctttactctc ccaagaattc ggccttccac aagagagaga aacgtgcctc atggctgagg
     7081 tatcagccct gttggcttaa tactgtttcc ccacagggcc aagtcagtgg acaaacaaag
     7141 gaacattttc ttcaatcatg atttcatagc aagcaaagct tagggaaaaa aaagtccgaa
     7201 actcattatt cttcaacttt gagaacatct atatggggcc cacaggacta cacggagcaa
     7261 aagcctgatg tattcaatag cactgtagag aaacagaacc ttggaggctt tatggggcct
     7321 tgtctctact actgacagaa taaaattaaa aagagaccca gtgccttgat ttttttttaa
     7381 gctagaccta ccttatgaag gaaatcctcc tgcaacttca ggatgatccg agaactgttt
     7441 tctctgttcc ctggtccaca gtgagaccaa acctaaaaag aataattacc tttccctcac
     7501 tggaaatcaa caaatttgtt tttttttttg ttttctgttt agtgattgag caatgttata
     7561 gaatttcagg cctgtggaag gaattgaaaa gtggtggata gaggaatgtg tgtctgaaaa
     7621 ttcccatcag attgaacacc gagatccact gtgcgcagct ttcaaactgc attaaattgg
     7681 gtagacatcc cactgcttcc tgggtccatg caaacagaaa gtccaagttt tatacaatta
     7741 ggcgggaggg tgttccattc agaaaagtcc atagtagtgt ttctctgctc tctcagttca
     7801 tgccaaccta gggtagaaac gaggctacag tgagacagaa agggggattc ttcataaggt
     7861 atccctacaa agtcaccttt cccataaaaa agaggaaaaa tagagactaa aataagccag
     7921 gactctcata tgcaactgtg gcttccaagt acaactcttt ctccctccag tcatgtagtc
     7981 gcccacagac tggcttttaa aagctaggtt tggctgctga gtgggaagtg agccgttccc
     8041 aaagacgctt cgagcccctc tcttgatcac ttcagaaagt gttccgttcc atatgcagaa
     8101 ctatttacta gtgcaacata aaacaaagcc tgttgtctat accctcactt tctgtagtct
     8161 tccctgttct tttatgatta tcaagtcatc tgttcatacg ttctaaagat acattatgtg
     8221 aaatcatagt ttggcatatg ggaatggaga gtgaattctt tacaaacttt ttaaaataat
     8281 cccatttata tcaccgaaga cattttggat gttattgtat atgagtatat aaatttttca
     8341 tgttttattt tgcattggaa taaagcttta ttcagtcagt ga
//
