LOCUS       NM_001191077            1095 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus progestin and adipoQ receptor family member 6
            (Paqr6), mRNA.
ACCESSION   NM_001191077 XM_001059976
VERSION     NM_001191077.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Tang,Y.T., Hu,T., Arterburn,M., Boyle,B., Bright,J.M., Emtage,P.C.
            and Funk,W.D.
  TITLE     PAQR proteins: a novel membrane receptor family defined by an
            ancient 7-transmembrane pass motif
  JOURNAL   J Mol Evol 61 (3), 372-380 (2005)
   PUBMED   16044242
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_001059976.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.34527.1,
                                           SRR26643284.3074.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                JAXUCZ010000002.1  176132337-176132374
            39-114              JAXUCZ010000002.1  176132771-176132846
            115-242             JAXUCZ010000002.1  176133451-176133578
            243-445             JAXUCZ010000002.1  176133660-176133862
            446-572             JAXUCZ010000002.1  176133938-176134064
            573-669             JAXUCZ010000002.1  176134690-176134786
            670-820             JAXUCZ010000002.1  176135006-176135156
            821-1095            JAXUCZ010000002.1  176135461-176135735
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1095
                     /gene="Paqr6"
                     /note="progestin and adipoQ receptor family member 6"
                     /db_xref="GeneID:681021"
                     /db_xref="RGD:1584722"
     exon            1..38
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            39..114
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..1095
                     /gene="Paqr6"
                     /note="progestin and adipoQ receptor family member VI"
                     /codon_start=1
                     /product="membrane progestin receptor delta"
                     /protein_id="NP_001178006.1"
                     /db_xref="GeneID:681021"
                     /db_xref="RGD:1584722"
                     /translation="MLSLKLPQLLRVHQVPRVFWEEGIMSGYRCPTSSALDCVLSSFQ
                     MTNETVNIWTHFLPTWYFLWRLLALGSPGFHAEPYHLPLLVFLLPTCLYPFASCCAHT
                     FSSMSPRARHICYFLDYGALSLYSLGCAFPYAAYSMPASWLHSRLHQLFVPAAALNSF
                     LCTGLSCYSRFPELENPGLSKVLRTAAFAYPFLFDNLPLFYRLRLCWGRAHSCGRDAL
                     SCSHGYHLLCALLTGFLFAARLPERLAPGRFDYIGHSHQLFHICAVLGTHFQLEAVLA
                     DMGSRRGWLAMQEPILGLEATVATLSLAVIGNLLIIAAFTASLLRSPGACPLLQGGPL
                     EEELEAKQQ"
     exon            115..242
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            243..445
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            446..572
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            573..669
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            670..820
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
     exon            821..1095
                     /gene="Paqr6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcaggcgga gccgaggcca cccggacgcg gcaaacaggt caacgtggag gtaccgggcc
       61 accatgctca gtctcaagct gcctcaactc cttcgagtcc atcaggtccc ccgggtgttt
      121 tgggaagaag gcatcatgtc tggctaccga tgccccacaa gctctgcctt agactgtgtc
      181 ctcagctcct tccagatgac taacgagacg gtcaacatct ggactcactt cctgcccact
      241 tggtacttcc tgtggcgcct cctggcgttg ggcagcccgg gcttccacgc ggagccgtac
      301 cacctaccgc tgctggtctt cctactgccc acctgcctct atccctttgc atcctgctgc
      361 gcgcacacct ttagctccat gtcgcctcgc gctcgtcaca tctgctactt cctggactac
      421 ggggcactca gcctctacag cctgggctgc gccttcccct atgctgccta ctccatgccg
      481 gcctcctggc tgcacagccg cctacaccag ctcttcgtgc ccgctgctgc actcaactcc
      541 ttcctgtgca ccggcctctc ctgctactct cggttcccag agctagaaaa ccccgggctc
      601 agcaaggttc tccgcacagc cgcctttgcc taccccttcc tgtttgacaa cctcccgctg
      661 ttctacaggc tgcggctgtg ttggggcagg gcccacagct gtgggcggga cgcactgagc
      721 tgcagccatg gttaccacct cctctgcgct ctgctcacag gcttcctttt tgcagcccgt
      781 ctaccagagc gcctggcgcc tgggcgcttc gactatattg gccacagcca ccagctgttc
      841 cacatctgtg cagtgctggg cacccacttc cagctggaag ccgtgctggc tgatatgggg
      901 tcccgcagag gctggctggc catgcaggaa cccatcctgg gcctggaggc caccgtggcc
      961 accttaagcc tggcagtgat tgggaacctg ctcatcatcg ccgctttcac agcctccttg
     1021 ctgcggagcc ctggggcctg ccccctgctg cagggtggcc ccctcgaaga ggaactcgaa
     1081 gccaaacaac agtga
//
