LOCUS       XM_039081351             937 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Pannexin 1 (Panx1), transcript variant
            X1, mRNA.
ACCESSION   XM_039081351
VERSION     XM_039081351.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039081351.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..937
                     /gene="Panx1"
                     /gene_synonym="px1"
                     /note="Pannexin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     77 samples with support for all annotated introns"
                     /db_xref="GeneID:315435"
                     /db_xref="RGD:735204"
     CDS             225..878
                     /gene="Panx1"
                     /gene_synonym="px1"
                     /codon_start=1
                     /product="pannexin-1 isoform X1"
                     /protein_id="XP_038937279.1"
                     /db_xref="GeneID:315435"
                     /db_xref="RGD:735204"
                     /translation="MKYISCRLVTFAVVLLACIYLSYYFSLSSLSDEFLCSIKSGVLR
                     NDSTIPDSFQCKLIAVGIFQLLSLINLLVYALLVPVVIYTLFVPFRQKTDVLKVYEIL
                     PTFDVLHFKSEGYNDLSLYNLFLEENISELKSYKCLKVLENIKSNGQGIDPMLLLTNL
                     GMIKMDVIDGKVPMSLQTKGEDQGSQRMDFKDLDLSSETAANNGEKNSRQRLLNSSC"
ORIGIN      
        1 tacccagata agctgcttct ccccaagttc cttctcctgg cgccaggccg ccttcgtgga
       61 ctcttactgc tgggccgctg tacagcagaa aaactccctg cagagtgagt ctggaaacct
      121 cccgctgtgg ctgcacaagt ctgtgggaga tatccgaaag ccacttcaag tacccgatcg
      181 tggagcagta cttgaagacg aagaagaact ccagtcacct aatcatgaaa tacattagct
      241 gccggctggt gacctttgcg gtggtactgc tggcttgcat ctacttgagc tactacttca
      301 gcctctcctc gctctccgac gagtttctgt gtagcatcaa gtcgggcgtc ctgaggaacg
      361 acagcaccat ccccgatagc ttccagtgca agctcatcgc ggtcggcatc ttccagctgc
      421 tcagcctcat taacctccta gtgtacgccc tgctggtccc cgtggtcatc tacacgctct
      481 tcgtcccgtt ccggcagaag acggacgtcc tcaaggtata cgagatcctg cccaccttcg
      541 atgttctaca tttcaagtct gaaggctaca acgacttgag cctctacaac ctttttctgg
      601 aagagaacat aagtgagctc aaatcgtaca agtgtcttaa ggtgctggag aacattaaga
      661 gcaatgggca gggcatcgac cccatgttac ttctgacaaa cctaggcatg attaagatgg
      721 acgtcattga tggaaaagtc cccatgtccc tacagaccaa gggagaggac cagggcagcc
      781 agagaatgga cttcaaagat ttggacctga gcagcgagac ggcagcgaac aatggggaga
      841 agaactctcg ccagcgactt ctgaattcat cctgctaatg gtttcattct tgaatttcaa
      901 gcctgtgact cctgtggctg acccacccct gttggaa
//
