LOCUS       XM_039095175            3505 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus palladin-like 1 (Palldl1), transcript
            variant X1, mRNA.
ACCESSION   XM_039095175
VERSION     XM_039095175.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3505
                     /gene="Palldl1"
                     /note="palladin-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:364558"
                     /db_xref="RGD:1359390"
     CDS             264..1421
                     /gene="Palldl1"
                     /codon_start=1
                     /product="palladin isoform X1"
                     /protein_id="XP_038951103.1"
                     /db_xref="GeneID:364558"
                     /db_xref="RGD:1359390"
                     /translation="MSETSSHDSFYDSLSDVQEEGRSADFFPGLSAFLSQEEINKSLD
                     LARRAIDNSETEDFDSEKEISQIFSKSPTSLCETPSYEEKKSGEQTSSEGPRDNRRAS
                     VQPLAEQAERITSPVASKRKPGVSPLLASPSYIRSLRKAEKRGAKVPNPSAKPKAAQQ
                     SKAGPQSQLCDKAASFIEELTSIFREAAKPRNRSPNGESSSPDSGYLSPKNQPSTLMS
                     ASASQSPTADQLDQLEMDAEVKQPQGSLCYQAHKAPEETLPHTHIPHPQPQKARHLPS
                     SAPRFIQKLRSQEVAEGSRVYLECRVTGNPAPRVSFLPPKSPHQPKGPYCTSFIGALC
                     AFCSFSVECSLFIFFHKVSLGYVLLYLPYVKRGWREVLPIPHNCSIWQFSP"
ORIGIN      
        1 agaacagatg agagtctcag gccacagttg tctcaatccc acagaccaag cagtccttaa
       61 tggacaggca aggcagacct cctctcacca ggagagagaa gaaaagctcc tgggaaatcc
      121 atcgcccttg cgaaggcttc aaaccaacca agcattgaaa agttctgtac acagcttaac
      181 acacttactg aaagcaagaa cacaggtttc ctgtgcctcc agcttcctgc tacaagtaac
      241 aagtgtgtgt agactgctca aatatgtcag agacttcctc ccacgactcc ttctatgatt
      301 ccttatcaga cgtgcaggaa gagggcagaa gtgctgactt cttcccaggc ctctctgctt
      361 tcctcagcca ggaagaaata aataaaagcc ttgacctggc acgcagagct atagacaact
      421 ctgaaactga agattttgac tccgaaaagg agatctcaca gattttcagc aagtctccta
      481 cgagcctctg cgaaactcct tcctatgagg agaagaaatc aggcgagcag acttcctcag
      541 aaggacctcg ggataatagg cgagcatctg tccagcctct agcagaacaa gctgaaagga
      601 tcacttcccc ggtggcttca aagagaaaac ctggggtatc acccctgctg gccagcccca
      661 gctacatccg gagcctacgc aaggctgaaa aacgaggtgc aaaagttccc aatccaagtg
      721 caaagcccaa ggctgcccag caaagcaagg ctggccccca gagccaactg tgcgacaagg
      781 cagctagttt catcgaggaa ctgacatcca tatttagaga ggcagccaag ccaagaaaca
      841 gaagccctaa tggtgagtcc tcgtcaccag acagtgggta tctgtctcct aaaaatcagc
      901 catcaaccct gatgagtgcc tcagccagcc agagccccac tgcagaccag ctagaccaac
      961 tcgagatgga cgcagaggtc aagcaacccc agggcagcct ttgctaccag gcccacaagg
     1021 ctccagaaga gaccttgcca cacactcaca tcccgcaccc acagccccag aaagcccgcc
     1081 acttgccatc gtctgcacct cgcttcatcc agaagctgag gagccaagaa gttgccgaag
     1141 gaagcagagt ttatttggag tgtagagtca ctggaaaccc agctcccaga gtcagcttct
     1201 taccgccgaa gagtccacat cagcctaagg gaccttactg cacctccttc ataggggccc
     1261 tctgtgcctt ctgctctttc tccgtggaat gttctctctt catatttttc cataaagtat
     1321 ctttggggta tgtcttgcta tatctaccct atgttaaaag ggggtggaga gaggtcctgc
     1381 ccataccgca caattgtagt atctggcagt tttctccata aacttttatg acatactgtg
     1441 gattactggt tcaattttac tatccatttc cttcaacaga attaaaaatc cttgagtata
     1501 aggacctacc tttttttttc atttattggt gtctgagatc taaaatggca tctgacatct
     1561 aatatgtgat caataaatac atgttgaata actctgggag taaattccac tccaaggtgg
     1621 aagaaaatgt tgccctggtg ttctcaataa aactggaaaa gctataaaag taagtgaata
     1681 aattaaatca agatatatac ataatgaata aaccagaggt gaatttatca gatctgaaac
     1741 tcaaaaataa aataccaatt aagagtaagc aagttaaaaa gaagtgcaca gggctggaga
     1801 gatggctcag ccgttaaagg ctaggctcac acccaaaaaa agaagtgcac agtggctcag
     1861 ttagcaaagt gcttggttaa catgcacaaa gcccacggtc tgataccaag cacctgaaaa
     1921 tgagcaaaga agccaacaaa cactcgaaca gtggaagcag gggccttatc cattcatagc
     1981 aaaaggggga ttgaggacag cctggcctcg tgaatataca caactagcat gaataaatgg
     2041 ttttcttaaa gttactttct aaaacaacac catcttaagc ctactgaggt tgtcagaata
     2101 caaactagta cacaagaatg tcaaatgtta cattaaatat gccagtaacc acagagacaa
     2161 agaaccaagg ggcttcggtt gtggtcacag cataacctta aaagcattgc cttttatctt
     2221 cctttaccat ctatactatc tatgcactgg tactgtgcat aatttagtac agaaaaacca
     2281 cccagaagag ccaggtgcat atagctcagt gaaaaatcat ctgcccagca cattcaaggc
     2341 cctggattca gtccccagta ccagaagaaa accatcatta aaaacatctt gacgtctcta
     2401 gtaacatgaa ttgaataggg tggatcttag tcattttcca ttataagtta tttgttaacc
     2461 acttttctgg gttgtgtcag tgatatttta ggactttaaa aatcactttt ttgttttgat
     2521 tttgttatgt tccaataaaa tattatgttt tcagtcttat ggcaaagacc tttaatgaaa
     2581 tagtctaccc aggtttttgg ctacagaaga tacaagaaaa agtcaaaatg tagacacttg
     2641 aattcatgca cgtgtgtgga gtttcttact cttttgttat tgagttcttt ttttcttctc
     2701 cacatgggcc tttttgtgta acaaatgtca agaaatgttc cctagaacaa caaattactg
     2761 ttgaactaga aaccaaaaga tctcagcaat ggagtagtgc ccttcggtga tgtggaaatg
     2821 gaaccttctc tctgccttct ccggacatac ttgtctgtgc cccacagact aaaagtgtat
     2881 ggtggtctgc ttgatgctct gtcttccttc ccacacctct gttctttctc aatccacttg
     2941 tctccagtac ctgcccactt ggaattcttc ctttaaaaca ctgggtttat ctctatggta
     3001 gtttaaacag aaggctatca ttgatcagac tgttgaatct tttgcttcag atcttgagaa
     3061 aatggagttg ctctgtactg ctgacacagg aggtatcaga cctgttggct ggaattgctg
     3121 tttcatagtt tgaacattta cagatggcca gttgctacct cacctccttt ccgggtttca
     3181 tttcctcttc ccgggcagca ccagggtgtg tgacaagcac attcatgata tccacaataa
     3241 ggctgctcac aatgctgttt cagggagtca agaagcaagc ttcaaggcct ggaagatggc
     3301 tcggaagcaa aggcatttac tgtcaaggtt gatgagacct aaattcaacc caaatgatga
     3361 agcagagaac caatggctac agtttgccca ttgactacca catgaacaat gtggtacatg
     3421 tgcagctgtg caggcaagga tcttcacatg cacacaacac tatatagatg atgatgatga
     3481 tcatgaggag gaggaggaga aggag
//
