LOCUS       XM_017600993            1619 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus poly(A) binding protein interacting
            protein 2 (Paip2), transcript variant X6, mRNA.
ACCESSION   XM_017600993
VERSION     XM_017600993.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017600993.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1619
                     /gene="Paip2"
                     /note="poly(A) binding protein interacting protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 98 ESTs, 14 long SRA reads, 13 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 138 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:361309"
                     /db_xref="RGD:1359176"
     CDS             292..666
                     /gene="Paip2"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 2 isoform X1"
                     /protein_id="XP_017456482.1"
                     /db_xref="GeneID:361309"
                     /db_xref="RGD:1359176"
                     /translation="MKDPSRSSTSPSIINDDVIINGHSHEEDNPFAEYMWMENEEEFN
                     RQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSL
                     EDLVVKSNLNPNAKEFVPGVKY"
ORIGIN      
        1 caggggtgtt tgtttggact ggagaaggga ggcggcgggc aaagcgcacg tcgagcgggg
       61 gagcggcgct gcctgtggag atccgcggag gccgacagga ttcgttggct accgtccccg
      121 ctgccgtgca ctgggagcct gccctgcatc atcttctttt tagaagttca gcttcctgtg
      181 gactaggaat ggatcctgat tgctgttggc agtaatgatc cagcatcttc tgtagaaagt
      241 gctgctcttc cttgctccaa aggctgttaa aaacgacaac gaacaccaac catgaaagat
      301 ccaagtcgca gcagtactag cccaagcatc atcaatgacg atgtgattat taacggtcat
      361 tctcatgaag aggataatcc atttgcagag tacatgtgga tggaaaatga agaggaattc
      421 aacagacaaa tagaagagga gttgtgggaa gaagaattta ttgaacgctg tttccaagaa
      481 atgctggaag aggaagaaga acatgaatgg tttattccag cccgagatct cccacaaact
      541 atggaccaaa tccaagacca gtttaatgac cttgttatca gtgatggctc ttctctggaa
      601 gatcttgtgg tgaagagcaa tctgaatccc aatgcaaagg agtttgttcc tggggtgaag
      661 tactgacatg tctgagcagc cggccgcttt gggtggatgt agcacagttt ccacactggg
      721 aaggcagtgt tagaagactc cattgtaaaa gctctctctc gtcactgtgt tacacttacg
      781 cattgccaaa gtttttgtta gtcttgcatg cttaataaaa gtgctgagac tgttactaag
      841 taagaagctg tcacacagtt actgaaagta gaattggccg catggcttga tgtaaagaca
      901 gcaggaagaa gcaccagtcg attgtgacaa agaaccaaat taaatcacct ccaaatctca
      961 ctgaattgtc tgtctttgag gctaaactgg tcccttagga ttagttgaca ctttttaatg
     1021 tctacacgtt gtaaaaaaaa taagtaaata agtaagttta aattaagttc tgattgttaa
     1081 acagatttct cagttgcatt tgtccatcaa aaataacctt ttctggagaa aatctgttaa
     1141 cttttaaagt aatttcacaa gaatgtcttt gcctgaggtt acaaggtggt ggtcagatgg
     1201 gatctagtct gtctgacttt tgcctggtgt attatcatgt taggaatgct gcgttctcct
     1261 agtgttaagc ttgaggaaat acaattggag gcttgcgtct tctgaagatt gattgcatca
     1321 taccatccgt gtgaagtcta accaggaccc acaccaaccc ataacccaat tgaagcactc
     1381 aagagacagt ggcgtgactt tggtgctctt ccctgctttg ttaataacca tcatgactat
     1441 agtctgcagc acacgttttc ttttaacaaa gctagaacag ttttggcttc ttaaacttca
     1501 tatttgagta ggttaagctg ccatacgtgt tcagtgtgaa tagtgtttaa gttgaaaata
     1561 ttgtaaaaaa attatatttt ttcaaaaata tttaaaaaaa taaatgatag tagaactga
//
