LOCUS       XM_008772048            1559 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus poly(A) binding protein interacting
            protein 2 (Paip2), transcript variant X2, mRNA.
ACCESSION   XM_008772048
VERSION     XM_008772048.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008772048.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1559
                     /gene="Paip2"
                     /note="poly(A) binding protein interacting protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 102 ESTs, 20 long SRA reads, 13 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 221 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:361309"
                     /db_xref="RGD:1359176"
     CDS             232..606
                     /gene="Paip2"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 2 isoform X1"
                     /protein_id="XP_008770270.1"
                     /db_xref="GeneID:361309"
                     /db_xref="RGD:1359176"
                     /translation="MKDPSRSSTSPSIINDDVIINGHSHEEDNPFAEYMWMENEEEFN
                     RQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSL
                     EDLVVKSNLNPNAKEFVPGVKY"
ORIGIN      
        1 ggggtgtttg tttggactgg agaagggagg cggcgggcaa agcgcacgtc gagcggggga
       61 gcggcgctgc ctgtggagat ccgcggaggc cgacaggatt cgttggctac cgtccccgct
      121 gccgtgcact gggggatggg gggaatggcg attcactgta atggttaaag gctgtgcata
      181 ttggtccttg agaactcaaa ccgaggttaa aaacgacaac gaacaccaac catgaaagat
      241 ccaagtcgca gcagtactag cccaagcatc atcaatgacg atgtgattat taacggtcat
      301 tctcatgaag aggataatcc atttgcagag tacatgtgga tggaaaatga agaggaattc
      361 aacagacaaa tagaagagga gttgtgggaa gaagaattta ttgaacgctg tttccaagaa
      421 atgctggaag aggaagaaga acatgaatgg tttattccag cccgagatct cccacaaact
      481 atggaccaaa tccaagacca gtttaatgac cttgttatca gtgatggctc ttctctggaa
      541 gatcttgtgg tgaagagcaa tctgaatccc aatgcaaagg agtttgttcc tggggtgaag
      601 tactgacatg tctgagcagc cggccgcttt gggtggatgt agcacagttt ccacactggg
      661 aaggcagtgt tagaagactc cattgtaaaa gctctctctc gtcactgtgt tacacttacg
      721 cattgccaaa gtttttgtta gtcttgcatg cttaataaaa gtgctgagac tgttactaag
      781 taagaagctg tcacacagtt actgaaagta gaattggccg catggcttga tgtaaagaca
      841 gcaggaagaa gcaccagtcg attgtgacaa agaaccaaat taaatcacct ccaaatctca
      901 ctgaattgtc tgtctttgag gctaaactgg tcccttagga ttagttgaca ctttttaatg
      961 tctacacgtt gtaaaaaaaa taagtaaata agtaagttta aattaagttc tgattgttaa
     1021 acagatttct cagttgcatt tgtccatcaa aaataacctt ttctggagaa aatctgttaa
     1081 cttttaaagt aatttcacaa gaatgtcttt gcctgaggtt acaaggtggt ggtcagatgg
     1141 gatctagtct gtctgacttt tgcctggtgt attatcatgt taggaatgct gcgttctcct
     1201 agtgttaagc ttgaggaaat acaattggag gcttgcgtct tctgaagatt gattgcatca
     1261 taccatccgt gtgaagtcta accaggaccc acaccaaccc ataacccaat tgaagcactc
     1321 aagagacagt ggcgtgactt tggtgctctt ccctgctttg ttaataacca tcatgactat
     1381 agtctgcagc acacgttttc ttttaacaaa gctagaacag ttttggcttc ttaaacttca
     1441 tatttgagta ggttaagctg ccatacgtgt tcagtgtgaa tagtgtttaa gttgaaaata
     1501 ttgtaaaaaa attatatttt ttcaaaaata tttaaaaaaa taaatgatag tagaactga
//
