LOCUS       NM_001399758            2506 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus poly(A) binding protein interacting protein 1
            (Paip1), transcript variant 1, mRNA.
ACCESSION   NM_001399758 XM_008760779
VERSION     NM_001399758.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Craig,A.W., Haghighat,A., Yu,A.T. and Sonenberg,N.
  TITLE     Interaction of polyadenylate-binding protein with the eIF4G
            homologue PAIP enhances translation
  JOURNAL   Nature 392 (6675), 520-523 (1998)
   PUBMED   9548260
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 13, 2022 this sequence version replaced XM_008760779.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.2527219.1,
                                           SRR26360172.949494.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-235               JAXUCZ010000002.1  53256487-53256721
            236-405             JAXUCZ010000002.1  53257537-53257706
            406-591             JAXUCZ010000002.1  53265209-53265394
            592-704             JAXUCZ010000002.1  53267928-53268040
            705-816             JAXUCZ010000002.1  53271474-53271585
            817-942             JAXUCZ010000002.1  53273576-53273701
            943-1049            JAXUCZ010000002.1  53275135-53275241
            1050-1167           JAXUCZ010000002.1  53275921-53276038
            1168-1222           JAXUCZ010000002.1  53276988-53277042
            1223-1316           JAXUCZ010000002.1  53280575-53280668
            1317-2506           JAXUCZ010000002.1  53281686-53282875
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q15"
     gene            1..2506
                     /gene="Paip1"
                     /note="poly(A) binding protein interacting protein 1"
                     /db_xref="GeneID:365684"
                     /db_xref="RGD:1305668"
     exon            1..235
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..1410
                     /gene="Paip1"
                     /note="isoform a is encoded by transcript variant 1;
                     polyadenylate-binding protein-interacting protein 1"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 1 isoform a"
                     /protein_id="NP_001386687.1"
                     /db_xref="GeneID:365684"
                     /db_xref="RGD:1305668"
                     /translation="MSDSFDRAPEQTRPQRAPPSSQDKIPQQNSESAMAKPQVVVAPV
                     LMSKLSANAPEFYPSGYSSNYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIE
                     QFAETLNGWVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFR
                     QLLLQRCRTEYEAKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQ
                     VGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDTWKEKGKTDMEEIIQRIENVVLD
                     ANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPFT
                     AADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCL
                     ESERKRKQ"
     exon            236..405
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            406..591
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            592..704
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            705..816
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            817..942
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1049
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1167
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1222
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1316
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1317..2506
                     /gene="Paip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagagcgtcc gccagccgaa gggagctggg gaggcgggcg ctgtgctgcg gcgcgtcggc
       61 gggggcccgg agcgcggagg accgagcagg gcccgccggc ctcctccatg aggcctgagt
      121 gaggcacagc ggtgacaggc ggcccgcggc gcctcccgcg cgtcctattc ggagcagcgg
      181 cggcggcccc gttggagagc aaggagcatg tcggacagtt tcgatcgggc tccagaacaa
      241 acgaggcccc agagagctcc acctagttca caggataaaa tcccacagca gaactcggag
      301 tcagcaatgg ctaagcccca ggtggttgta gctcctgtgc taatgtctaa gctgtctgcg
      361 aacgcccccg aattttaccc atcaggttat tcttctaatt atacagaatc ctatgaggat
      421 ggttgtgagg attatcccac tctatcagaa tacgttcagg attttctgaa tcatcttaca
      481 gaacagcctg gcagttttga aacagaaatc gaacagtttg cagaaaccct gaatggatgg
      541 gtcacaacag acgatgcttt gcaagaactt gtggagctta tctaccaaca ggccacgtct
      601 atcccaaatt tctcttacat gggagctcgc ctgtgtaatt acctgtccca tcatctgaca
      661 attagcccac agagtggcaa cttccgccaa ttgctacttc aaaggtgccg gacggagtat
      721 gaggcaaaag accaagctgc caaaggggat gaagtgactc gaaaacgatt tcatgcgttt
      781 gtcctgtttc tgggagaact atatcttaac ctggagatta aagggacgaa tggacaggtc
      841 acaagagcag atattcttca ggttggtctt cgggaactgc tgaatgctct gttctctaat
      901 cctatggatg acaacttaat ttgtgcagta aagttgctaa agttgacagg gtcagtttta
      961 gaagatactt ggaaggaaaa ggggaaaact gatatggaag aaataattca gagaattgaa
     1021 aatgttgtcc tagatgcaaa ctgcagcaga gatgtaaaac agatgctctt gaagcttgtt
     1081 gaacttcgat caagtaactg gggcagggtc catgcaactt caacatacag agaagctact
     1141 cctgaaaatg accctaacta cttcatgaat gaaccaacat tttatacatc tgatggtgtt
     1201 ccttttactg cagctgaccc agattaccaa gagaagtatc aagagttact tgaaagagag
     1261 gacttttttc cagattatga agaaaatgga acagatttat caggggctgg tgacccatat
     1321 ttggatgata tcgatgatga gatggaccca gagattgaag aagcttatga aaagttttgt
     1381 ttggaatcag agcgcaagcg aaaacagtaa agttaaattt gaggatatca gttttttttt
     1441 tttttttttt tttttaagtt taggtatggt gatttagcag aacacaggaa agcaagaaac
     1501 tgtgtcaaac ttataccaaa ttaaggatgt tgagttatgt tactaatgta tgcaacttta
     1561 attttgttta acactacctg ccaaaataaa ctttattccc tgtaacttaa atgtgtatat
     1621 atatataata gttttattat gtacagttaa ttctactgtt ttggctgcaa taaaatcgat
     1681 tttgaaataa atgaaatgtt gaaagaaaat tttgctagct ggttagatgc ttattgttca
     1741 acttcttttt cttgaggtta aaaagtctta gcctggaaat acatattact gcaaaaatgt
     1801 agcattcttt tttagatatg attactacag cttttatttt agtttagcat ttgatgttct
     1861 atacattgag tttcaggtac taatcacaat catgaaaatc tttagcacca aagtcttgga
     1921 gtctataaac aacctattta catatgtaga tgctatttga taccaagggc ttttaaatgt
     1981 cattaatgtg gggttgggtg ggtcttagac accagctaag gaaccaagac tcttcattga
     2041 ggatttattc caattcagga gtggtttgcg ttttgtttgc ttcacctgac taatttcatt
     2101 acccgccatc ctacagtatt attctgcttt cttcatatgg cttactcatt tttatttcat
     2161 tgcatggtgc attgactttt tactagagaa ttttactagg tatttgtcat tcaagtttcc
     2221 atctgcttta tattggtata ccgtgagggt cacttttcta atacttttac tataatgtac
     2281 cacctcagcc ctgtttaagt aatgttttta tctaatgtca aatcttttcc aactaactaa
     2341 aagtaaacct atataaaagg gttgttgtaa atgtgcatgt aaatagttgt gttaataact
     2401 cattgtttta catttggtac atctgtgtct gcttatacac ctagttttcc cacttctgct
     2461 tgtttgtttg ttcagtctgt attaaaatta gaattggaaa ataaaa
//
