LOCUS       NM_001100508            2744 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus 3-oxoacyl-ACP synthase, mitochondrial (Oxsm),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001100508 XM_001062014 XM_001068016
VERSION     NM_001100508.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Zhang,L., Joshi,A.K., Hofmann,J., Schweizer,E. and Smith,S.
  TITLE     Cloning, expression, and characterization of the human
            mitochondrial beta-ketoacyl synthase. Complementation of the yeast
            CEM1 knock-out strain
  JOURNAL   J Biol Chem 280 (13), 12422-12429 (2005)
   PUBMED   15668256
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On or before Nov 23, 2008 this sequence version replaced
            XM_001062014.1, XM_001068016.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC090025.1, SRR21887622.566788.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1222              JAXUCZ010000015.1  11641620-11642841
            1223-2744           JAXUCZ010000015.1  11643845-11645366
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16"
     gene            1..2744
                     /gene="Oxsm"
                     /gene_synonym="RGD1311092"
                     /note="3-oxoacyl-ACP synthase, mitochondrial"
                     /db_xref="GeneID:289934"
                     /db_xref="RGD:1311092"
     exon            1..1222
                     /gene="Oxsm"
                     /gene_synonym="RGD1311092"
                     /inference="alignment:Splign:2.1.0"
     CDS             255..1625
                     /gene="Oxsm"
                     /gene_synonym="RGD1311092"
                     /EC_number="2.3.1.41"
                     /codon_start=1
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase,
                     mitochondrial"
                     /protein_id="NP_001093978.1"
                     /db_xref="GeneID:289934"
                     /db_xref="RGD:1311092"
                     /translation="MLSKCLQHFLKAHLYPASYCWLISKHKFSGSVPAAGSRRRVVIT
                     GIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYKSIPCSVAAFVPRGSDKGQFNEQN
                     FVSKSDAKSMSSPTIMAVGAAELALKDSGWYPKLEADQVATGVAIGMGMVPLEVVSET
                     ALMFQTKGYSKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFR
                     LIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNPDPKLACRPFHPERDGFVMGEG
                     AAVLVLEEHEHAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGV
                     SPDQISYVNAHATSTPLGDAAENRAIKRLFRDHARALAISSTKGATGHLLGAAGAVEA
                     AFTALACYHHKLPPTLNLDCTEAEFDLNYVPLEAQEWKTEGRCIGLTNSFGFGGTNAT
                     LCIAGM"
     exon            1223..2744
                     /gene="Oxsm"
                     /gene_synonym="RGD1311092"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaggatgcc ccctgcaggg tggggtggct ttgtgaaatc cagcgaactt gctgtcagtt
       61 gacagtctga gggacctcat agattacaaa taaaagttaa gtccaagcga gtgttgcatt
      121 tttctgtggc ttttagcaca tgacctcaag cacacctagg gtgtgtatgt aagatccttc
      181 gattgtttaa acaaaagttg ctgtctcttg tgatctgttc caggaatgtg tttctgatct
      241 tctgaatttc aaccatgttg tcaaagtgct tgcaacattt tctaaaagcc catctgtatc
      301 cagcatcata ttgttggtta ataagcaagc acaagttttc tggaagtgtg ccagcagccg
      361 ggtcgcgcag gcgagttgtc atcacaggca ttggactagt gacaccactt ggcgttggga
      421 ctcaactagt ttgggatcgg cttctccgag gagaaagtgg aattgtttct gtagttggtg
      481 atgagtacaa gagtattcct tgcagtgtag ctgcttttgt accaagaggt tcagataaag
      541 gtcagtttaa tgaacaaaac tttgtgtcca aatcagatgc caagtccatg tcctctccca
      601 ccatcatggc ggtcggagca gcagagttgg ccctgaaaga ctccggctgg tatccaaaac
      661 tagaagcaga tcaggtggct actggcgttg ccattggcat gggcatggtt cctctggaag
      721 ttgtttctga aactgcttta atgtttcaaa ccaaaggtta tagtaaagta agcccattct
      781 ttgtccctaa gattctgatc aatatggctg caggccaggt cagcattcgc tacaaactca
      841 aaggccccaa tcattcagtg tctacagcct gtaccacggg tgcacatgct gtgggagact
      901 cttttagact tatagcccat ggtgacgcag atgtgatggt ggctggaggc acagactctt
      961 gtattagtcc gttatctctc gctgggtttt ccagagcccg ggctctaagc acgaacccag
     1021 atcctaagct ggcctgccga ccatttcatc cagaaagaga tggttttgtc atgggtgagg
     1081 gagctgctgt actggtgcta gaagaacatg aacatgctgt tcagagagga gcccggatct
     1141 acgcagaagt tttgggttat ggactctcag gtgatgctgg tcacataact gcccccgatc
     1201 ctgaaggaga aggtgcttta agatgcatgg ctgctgctgt aaaagatgca ggcgtatcac
     1261 ctgatcagat atcctatgtc aacgcacatg ccacctccac accactgggt gacgctgctg
     1321 agaacagagc catcaagagg ctctttaggg accatgctcg tgccctcgcc atatcctcca
     1381 caaagggagc cacggggcat cttctgggag ctgcaggggc agtcgaggca gctttcactg
     1441 cactggcttg ttaccatcac aaactaccgc caactttaaa cctggattgt acagaggcag
     1501 aatttgatct caattatgtt ccactggagg cacaggaatg gaaaaccgag ggtcgatgta
     1561 ttggactcac caattccttc gggtttggtg gtactaatgc gacactttgt attgctggca
     1621 tgtaagcttt ggctttcaat agtcataaat gtataaatag tatgcacata aatgtcttat
     1681 cagtgcccag gtgactctag cctacttggt atttgtacag ttctttgcta gtgaacaggc
     1741 tacctagtac ttgtcggtat tttatagcat cttggtgtct cctgtgagat ttcagtggca
     1801 actgtgacaa ctagaaatgt ctctggagga caggatagcc tgcacacaga actactgatt
     1861 tatatttttc taacgcacta tttcacccat ccctgtcctt tttagatatt tatttagaga
     1921 ctagctcctc tgagcaaggc tgtgttgctt catggtgtaa ctctaggggc accactgtca
     1981 tacagcatat agggaggaat gtaatacaag taggagtatg catcatcagg cagcatcctt
     2041 tgaggacaac tgtcagtcaa ttatggccta gtcacccctg acctgtgtag gtctcctcag
     2101 tggattttcc cccaagcttt catttctctg aaggaggaag tgaagctgat ttggcatttt
     2161 tcttgtcttt tctcatttgt ccttccttcc ttccttcctt tctcctcctc ttcttctcct
     2221 tcctcctctt cttcctcccc tttctcctct tcctcccctc cccctttctc ctcttcccct
     2281 tcctcctctt cttctccttc ctcctcttct tcctcccctt tctcctcttc ctccccttcc
     2341 tcctcttccc ctttctcctc ttccccttcc tcttcctccc cttcctcctc ctcttcctcc
     2401 ccttcctcct cttcctcccc ttcctcctcc tcttcctccc cttcctcctc ttcctcccct
     2461 tcctcctcct cttcctcccc ttcctcctct tcctcccctt cctcctcccc tcctcccctt
     2521 cctccccttc ctcctcctct tcctcctccc ctcctcctct tcctcttcct ccccctcttc
     2581 ctcctcttcc tcttctttct cctcttcctc ctcctcttcc tcctctactt ctttgagact
     2641 gggtttctct tggaactcat tctataaacc ctggctggcc ttgaactcaa caaagatctg
     2701 tttgcctctg cctcccaagt gctactatta aaggtgtaca ccac
//
