LOCUS       XM_017594624            4515 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxidation resistance 1 (Oxr1),
            transcript variant X3, mRNA.
ACCESSION   XM_017594624
VERSION     XM_017594624.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594624.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594624.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4515
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4515
                     /gene="Oxr1"
                     /note="oxidation resistance 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 131 ESTs, 2 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 103 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:117520"
                     /db_xref="RGD:621857"
     CDS             161..2761
                     /gene="Oxr1"
                     /codon_start=1
                     /product="oxidation resistance protein 1 isoform X3"
                     /protein_id="XP_017450113.2"
                     /db_xref="GeneID:117520"
                     /db_xref="RGD:621857"
                     /translation="MDYLTTFTGKSGRLLRGTASRLWGLGGGGEARQVRFEDYLREPA
                     PGDPGCGPGELRPPSPTSPEGPDTGQKKTLDKKDGRRMSFQKPKGTIEYTVESRDSLN
                     SIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPEYVSSVESSPSLSPVSPLSPTSS
                     EAEFDKTTTPDVVHPKEAPPSSTESSIRPARVVSSTSEEEEAFTEKFLKINCKYITNG
                     KGTVSGVLLVTPNNIMFDPHKTDPLVQENGCEEYGIMCPMEEVMSAAMYKEILDSKLK
                     ESLPIEVDQLSGRGFCHSKKMTGVPAEETDSRSRDQGNDSVSTAPRSTEESLSEDVFT
                     ESELSPIREELPSSELRQEKSSDASSESVQTVSQIEVESLTAASESADVPDHTNANSG
                     RSSSEVGALSHETGLSSLEIATKEGDKATGNLQEVSGPKEQSTDIKGQDNQDSFHHEN
                     SLQQEAGEDSLSSGETVELTEKPTVLKDQQGKELKRDSETEVEELRKLWKTHSMQQAK
                     QQRDTIQQVAQRESKHRGAPADAHGEGSSLLKEKRRHRLHKFLCLRVGKPMRKTFVSQ
                     ASATMQQYAQRDKKHEYWFAVPQERTDHLYAFFIQWSPEIYAEDTGEYTREPGFIVVK
                     KMAESGPDEAPAGEAAAREWEVVSVAEYHRRIDALNTEELRTLCRRLQITTREDINSK
                     QAAPAKADLEPESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGKHGTS
                     LKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPFKVSDGFYGTGETFVFTFCPEFEV
                     FKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKKEDFF
                     IQDIEIWAFE"
ORIGIN      
        1 cccgacacgg tggccgttgg tccatcccgg gccgagggag gaggcctggc ccgcgccggt
       61 cgcctcgagg cgcggagccg ccgcccccgg gtcggcaggc tgggcgggcg ctgtcgcgca
      121 gcgggccgcg gcccagagaa ccgtggcgac gggcggcggc atggactacc tgaccacgtt
      181 caccggcaag agcggccggc tgctgcgggg cacggccagc cgcctgtggg ggctcggcgg
      241 cggcggcgaa gcgcggcagg tgcgcttcga ggactacctg agggagccgg ctccgggcga
      301 cccgggctgc gggcccgggg agctccgacc gccctcgccg accagtcccg agggacccga
      361 tactggccaa aagaagaccc tagacaagaa agatgggcga aggatgtctt ttcagaagcc
      421 taagggaact attgaatata ctgttgaatc aagggattct ttgaatagca tagccctgaa
      481 atttgatacc acacccaatg aacttgttca gttaaataag ttattctcca gagcagtcgt
      541 gactggacag gttttatacg ttcctgatcc tgagtatgtc tctagtgttg aaagttcccc
      601 atccctaagc cctgtaagtc ctctgtcacc aacatcatca gaagctgaat ttgataaaac
      661 cactactcct gatgtagtcc atccaaaaga agcgcctcct tcatctacag agagcagtat
      721 tcggcctgca agagttgtat cttcaacttc tgaagaagaa gaagcattta ctgagaaatt
      781 tcttaaaatt aattgcaaat atatcaccaa tggcaagggc acagttagtg gcgtcctgct
      841 agttacaccg aataacataa tgtttgatcc acataagaca gaccccctgg ttcaagagaa
      901 cggttgtgag gaatatggca tcatgtgtcc gatggaagag gtgatgtcag ctgccatgta
      961 caaagagatt ttggacagca aattaaagga gtcactgccc atagaagtag atcagttgtc
     1021 aggaaggggg ttctgccatt caaagaaaat gacaggagtc cctgctgagg aaacagactc
     1081 gagaagccgc gatcagggaa acgacagtgt cagcactgct cccaggagca ctgaggagtc
     1141 tctctcagaa gatgttttca cggagtcaga actctctcct atccgagagg agctgccctc
     1201 ctcagagctg agacaagaga agtcatctga cgcctcgtca gaatctgtgc aaaccgtcag
     1261 tcagatcgaa gtagagtcct tgacagccgc gtcagagtct gctgatgttc ctgaccacac
     1321 taacgcgaat agtggacgtt cttcaagcga agttggggct ttatctcatg aaactggttt
     1381 aagtagtctt gaaatagcca ctaaggaagg agataaagct acaggaaacc tccaagaagt
     1441 ctcaggccct aaagaacaaa gcacagatat aaaaggtcag gataaccaag attctttcca
     1501 ccacgaaaat tcactgcagc aagaggcagg tgaagacagt ctgtcttccg gagaaacagt
     1561 ggaactgaca gaaaagccaa ctgttcttaa ggatcaacaa gggaaggaac taaaacggga
     1621 ctcagagaca gaagtagagg aactgcgcaa actctggaaa acccactcta tgcagcaagc
     1681 caaacagcaa agggacacca ttcagcaggt ggcacagagg gagagtaaac acagaggcgc
     1741 acctgcagat gcacatggag agggctcctc gttgttaaag gaaaagagaa ggcatcgatt
     1801 acataagttc ttatgtctcc gagtcggaaa accaatgagg aagacatttg tatctcaagc
     1861 cagtgctacg atgcagcagt atgcacagag agataaaaaa cacgagtatt ggtttgcagt
     1921 gccacaagaa aggacagacc acttgtatgc cttcttcatt cagtggagtc cagaaatcta
     1981 cgcagaagac actggggagt acaccagaga gcccggattt atagtggtca agaagatggc
     2041 agagtctgga ccagatgaag cccctgccgg cgaagccgca gccagggagt gggaggtagt
     2101 gtcggtggct gagtatcacc gcaggatcga tgctctaaac actgaagaac tgcgcacact
     2161 ctgcagacgt ctccagatca ccacacggga ggacatcaac tcaaagcagg ctgctccagc
     2221 aaaagcagac ctggagccag aatctttccg accaaaccta agtgacccca gtgaactctt
     2281 actgcctgat cagatcgaaa agcttactaa gcaccttcca ccgagaacca ttggctaccc
     2341 atggactctt gtgtacggta ctgggaagca tggcaccagt ttgaagaccc tttaccgaac
     2401 aatgacaggt ctagacactc cggtgctgat ggtgattaaa gacagtgatg ggcaggtttt
     2461 tggtgcatta gcatcagagc cgtttaaagt aagtgatggc ttttacggta ctggagaaac
     2521 atttgttttt acattctgtc cagaatttga ggtcttcaag tggacaggag ataatatgtt
     2581 ttttatcaaa ggagacatgg attcgttagc gtttggtggt ggaggaggag aatttgctct
     2641 ttggcttgac ggagatctct accatggaag aagccattcc tgtaaaacgt ttgggaatca
     2701 tacactgtct aagaaggaag acttcttcat ccaagacatt gaaatctggg cttttgaatg
     2761 aatacagtgc tcttggttgt agcaggacat cagcccaaac ctgaatggac aaacgcatcg
     2821 tttggaatgt tcaagaagca atacaattaa tgtcacttgt gctttaaagt cagtctgttt
     2881 ggccatttac tgcaactata attttggagt ttatttttca aatcatgttt ctgtcccaga
     2941 gttcttttgt ttacaccatg gcctgggttc cagtagttta acagccaggt gggatctgtc
     3001 agcccagtgt agcacttgga tcacaaaggc caccaccttt tcagttgatg tcatctcagt
     3061 cctaactgga tggtgctctg ttcaactttt tttaacctgt gttaattctt tttatagagc
     3121 agtgtacttg gggcattgag gaaatggggc ctagatactt ctgtatctgg tgaagctgac
     3181 acaggtaaca attgggccta cttacatttt cgtctaaatg agaaaccaca tgccaaaata
     3241 acacatgctt catagacctc ttctagttct aattcagtgc agcattctct tattcatttt
     3301 gtaagcattc tcgatttcat ttgaagacag tgaaattgga ggagcagtct gattggcata
     3361 gacagcagca cacacagtcg gcaggtttgg gcgcatgttt tcatcactga attttcagat
     3421 agagttacaa attgacagag gagaatggga attcaatgat tctattggat ttaatatatt
     3481 aagcaagtaa tactatttac atatttgtag cttaataggg cattatcata agtacaaaac
     3541 taaaacttgc atatttcttc aacattgtgt catatacact gttttacagt tctcttgttt
     3601 tagcctcgtt gcataccaac tcccccaata cattttagtt ttgttttgtt ttctgctcaa
     3661 aaggaagcaa attgttttga aataaaaacg tgtttttttc taagtggtat atgttattag
     3721 ttaccattag catctgctct taccggaggg cagtgactat cgtagacaat actgtaactc
     3781 agtagacttg gcgaatgtgc aagcttactg tcaagtggcc tccaaaatga aaagatagaa
     3841 taaactagca cttgtattct ttcttgtagg aaaccaacaa taagccatgt ggcaacaatt
     3901 catcaattaa atttcagagc ttcatgtaat gcaaaaaaaa aaaaaaaaaa agtcctgctg
     3961 ttatacatgt gacagtgact ttgtgctgaa aattcagctg ttccacacaa acgttgtata
     4021 tcttgtaaat tgatgtttaa agatagtttt gttcttatag aaagtgttga ctgccaggtt
     4081 gcttatagca ctttaaatta ttctgaagat gaaattacca gccaagtatg ttggcttaag
     4141 tagttttagt tatataactc ttaaaaatac ctagttcttt tgggaacagt ttaaataatt
     4201 atctaaagaa agcataatat taatcagaat ctctggtgtt ctatgacacg ctgttgctga
     4261 agatgaatag aaacggcatc gtttcctcgt ctgtgtaaag ctctcattac aagttaggta
     4321 atagtgtcta ggatagatgt ttataacata aggaactgta aataaatgta cccttccccc
     4381 attggtcttc cacagcagta ttattgtctt cgtggaggtg actaattgca aaactttaaa
     4441 catcctgtaa tggattccag ctacaacaag gtcataggga tgtataccaa ataaaattaa
     4501 atgcataagt gcaaa
//
