LOCUS       NM_001108960             919 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus otoraplin (Otor), mRNA.
ACCESSION   NM_001108960 XM_001053452 XM_345442
VERSION     NM_001108960.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Cohen-Salmon M, Frenz D, Liu W, Verpy E, Voegeling S and Petit C.
  TITLE     Fdp, a new fibrocyte-derived protein related to MIA/CD-RAP, has an
            in vitro effect on the early differentiation of the inner ear
            mesenchyme
  JOURNAL   J Biol Chem 275 (51), 40036-40041 (2000)
   PUBMED   10998416
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474026.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001053452.1, XM_345442.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132273, SAMD00132286
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..919
                     /gene="Otor"
                     /note="otoraplin"
                     /db_xref="GeneID:366206"
                     /db_xref="RGD:1305253"
     exon            1..132
                     /gene="Otor"
                     /inference="alignment:Splign:2.1.0"
     CDS             18..404
                     /gene="Otor"
                     /codon_start=1
                     /product="otoraplin precursor"
                     /protein_id="NP_001102430.1"
                     /db_xref="GeneID:366206"
                     /db_xref="RGD:1305253"
                     /translation="MARILILLLGGLVALCAGHGMFMDKLSSKKLCADEECVYTISLA
                     RAQEDYNAPDCRFINVKKGQQIYVYSKLVTENGAGAFWAGSVYGDHQDEMGIVGYFPS
                     NLVREQRVYQEATKEIPTTDIDFFCE"
     exon            133..272
                     /gene="Otor"
                     /inference="alignment:Splign:2.1.0"
     exon            273..380
                     /gene="Otor"
                     /inference="alignment:Splign:2.1.0"
     exon            381..919
                     /gene="Otor"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaacagcaag aaggaagatg gcaagaatat tgattctttt gcttgggggc cttgtggctc
       61 tctgtgccgg gcatggcatg tttatggata aactttcttc taagaagttg tgtgcagatg
      121 aggagtgtgt ctataccatt tctctggcaa gagcacagga agactacaat gccccggact
      181 gtaggttcat caatgtcaag aaagggcagc agatctatgt ttattccaag ctggtaacag
      241 aaaatggagc tggggcattc tgggctggca gtgtttatgg tgaccaccag gatgagatgg
      301 gaattgtggg ttatttcccc agcaacttgg ttagagagca acgagtgtac caggaggcca
      361 ccaaggagat tccaaccacg gatattgact tcttctgtga ataagaaatt aattaaaact
      421 gcagataaaa cagagatgcc gatgaagaag agaagtggaa atgaccaaag ctgtgtattt
      481 gtgcctttct ggctttattt ggtggcagaa agttggatct agaaggtgct tatatatgga
      541 aattgtcaac tcagtcctgt tttctcctgt cctggccttt ccacaggctg ccaccacacg
      601 ctgtggaatc ataataggtc attataaccc agtacttagc tttcagtgag gagaatcttc
      661 atttactcag tgaagcacat tcaaagtgtt ttattcgtag ttatttctac atggtcattg
      721 tccccagctc ttaccatgtg tacataggct tgctgagtta gaagtctccc ttttggatgt
      781 gttttctgtt atttgtctcc ctggtcattt gaagtcttaa tactgtattt gtcaggatag
      841 tttagcattg ttatttttaa catttgatac ccttggatat aagaatgtta ggtataaaaa
      901 gagtttttgt actcataaa
//
