LOCUS       XM_039102190            4908 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oncostatin M receptor (Osmr),
            transcript variant X2, mRNA.
ACCESSION   XM_039102190
VERSION     XM_039102190.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039102190.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4908
                     /gene="Osmr"
                     /note="oncostatin M receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 17 ESTs, 1 long SRA read, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 60 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:310132"
                     /db_xref="RGD:1302983"
     CDS             287..3175
                     /gene="Osmr"
                     /codon_start=1
                     /product="oncostatin-M-specific receptor subunit beta
                     isoform X1"
                     /protein_id="XP_038958118.1"
                     /db_xref="GeneID:310132"
                     /db_xref="RGD:1302983"
                     /translation="MAFSVVLHQVTFLLAVLSLRTSRSKVLGEPLQLTPEIHTVSLQS
                     ALQEANLEWTVPTFSHQELNIVFQIEISRMRTSNTIWVGNYSTTVKHEETVHWKWTSD
                     IPLECATHFIRIRAMVDDTQYPPQSSWSNWSSWKEVNAQVSVPPDTLLIFPEDRLLEE
                     GSNVTICLMIGQNLYNVSCKLQEEPIRGEQLDSHLSLIKLNNVVFLNNAGTNINCKAM
                     NGTKNTFGTVLFVSKVLEEPKNFSCETRDFKTLNCLWEPGIDTTLSWHKQRSQHYTLY
                     ESFSGRREVSNHRNSHTWQITEDSQETYNFTLTAENNLRKRSVSISFNLTHRVHPKAP
                     HDVTLKTVGATKAHMTWKVPSRGDYTLLCQVELQCEGEVIHEHNVSVHTSANYLFSDL
                     EPDTEYKACVRCASAHHFWKWSDWMQKKFRTPEAAPSEALDVWRDVRTENGRHVVTLF
                     WKPLLKSQANGKIISYNIVVENEANPTESEQYSVRAPALGTNLSLDLHPYKIHISANN
                     SAGASPESLVVLSSHSGHEEVHEKTIKGIKNGFNISWEPVSGDAIGYVVDWCAHSQTQ
                     RCDLQWKNVGPNITSTIITSDAFEPGVRYNFRIFERSVEENVRLVEKQRGYTQELAPS
                     VNPGVTIHNLTPNSFSLKWQDYASDFQSGFIKGYLVYLKSKELQCNPNWERTVLSDKS
                     VLCKYDVDDPETKTLTVENLRPESLYEFLVTPYTSAGQGPNETYTKVTTPDVRSHMLL
                     QIILPMTLGVFLSIIVCYWKSQWVKEKCYPDIPNPYKSSILSLIKSKKNPHLIMNVKD
                     CIPDVLEVINKAEGSKTQCVGSGKLHTEDVPTKPPLVPTEKDSSGPMPFVFLENFTYD
                     QSAFDSGSHGFIPGPLKNTPHQLGLLAPPNKLQNVLENDYMKSLVESPTEETSLIYVS
                     QLASPICGDKDSLVTNPPMPVYGSEYKKQMALPGSLTSASLKENNLTS"
ORIGIN      
        1 gggtcccgat cgttccccac tacatcccct ttgggaccag gaggcaaatt cctgtgggtc
       61 ccaggagtgc caaaagtgct cagcgagacg ggaaattgca acagtactgg cccctcggcc
      121 ctcccccggc gccttcccgt aactcccgcc cctggacact tgccccgcag ctgattcata
      181 gccggggcgc ggggccgcct ccacacgccc ggacagacgt ccgcacccgc gcccctgagg
      241 ccgaggaccg gacgggctcg gagcaggtcg ccagataatc agaccaatgg ctttctctgt
      301 ggtccttcat caagtgacct tccttctggc agtgctgtcc ctgaggactt cccgaagtaa
      361 agtcttgggg gagcctttac agttgactcc tgagatacac acagtttctc ttcaatctgc
      421 acttcaagaa gcgaatttag aatggactgt cccaaccttt agtcatcaag aattaaacat
      481 tgtatttcag atagagatca gtcggatgag aacatccaac accatctggg tggggaatta
      541 cagcaccact gtgaagcatg aagaaactgt gcattggaaa tggacatctg atatcccctt
      601 ggaatgtgcc acacatttca taagaataag ggctatggta gatgacaccc agtaccctcc
      661 acagagttcc tggagcaact ggagttcctg gaaagaagtt aatgcacaag tttcagttcc
      721 acctgataca ttattaatat ttcctgaaga cagactgttg gaagaaggtt ccaatgtcac
      781 catctgtttg atgattgggc agaatctata taatgtatcc tgtaagttgc aagaagagcc
      841 aatccgtgga gagcaacttg attcacacct gtcactaata aaattgaata atgtagtgtt
      901 ccttaacaac gcagggacaa acatcaattg taaagccatg aatggtacta aaaatacatt
      961 tggtactgtt ctctttgtct caaaagtgct tgaggaacct aagaattttt cctgtgaaac
     1021 ccgagacttt aagactttga actgtttgtg ggaacctggg atagacacga ctttgagttg
     1081 gcataaacaa cgttcccaac actacacttt atatgaatcg ttctctggga gacgtgaggt
     1141 ttctaaccac agaaactcgc atacctggca aatcactgaa gactcacagg aaacatataa
     1201 cttcactctc acagctgaaa acaacctaag gaaaagaagt gtcagcatca gttttaacct
     1261 gacccacaga gttcatccaa aggctcccca tgatgtcact cttaaaactg taggtgctac
     1321 aaaagcccac atgacttgga aggttccctc ccgtggagac tacacacttt tgtgtcaggt
     1381 tgaactccag tgtgaaggag aagtgataca tgagcacaac gtttctgtcc acacgagcgc
     1441 caactacctc ttcagtgatc tggagccaga cacagagtac aaggcttgtg tgcgctgtgc
     1501 gagtgcccac cacttctgga aatggagtga ctggatgcaa aaaaagttca gaacacccga
     1561 ggctgccccc tcagaagctc ttgatgtgtg gagagacgtg cggacagaga atggaagaca
     1621 tgttgtgact ttattctgga agccactatt aaaatcacag gccaatggca aaatcatatc
     1681 ctataatata gttgtagaaa atgaagccaa tccaacggag tcagaacagt actctgttcg
     1741 ggcgccagcc cttggcacaa acctgagcct ggacctgcat ccctacaaga ttcacatctc
     1801 agccaacaac agcgcggggg catctcctga gtccttggtg gtcctttcta gtcattctgg
     1861 acatgaagag gtccatgaaa aaacaattaa aggtataaag aatggattca atatttcctg
     1921 ggagccggta tctggagacg cgataggcta tgttgtggac tggtgtgcac attctcagac
     1981 ccaacgctgt gatttgcagt ggaagaacgt aggtcccaat atcacaagca ccatcatcac
     2041 ctcagacgct tttgagccag gggtccgtta caacttcaga atttttgaaa gatctgtgga
     2101 agagaatgtt cggttagtag agaaacaaag aggatacacc caggaattgg ctccgtcggt
     2161 gaatccagga gtgacgattc ataacttgac cccaaactcc ttcagtctaa aatggcagga
     2221 ttatgccagc gacttccagt ctggctttat aaaagggtac ctcgtatatt tgaaatccaa
     2281 ggagctgcag tgcaacccaa actgggagag gactgttctg tcagataagt cagtgctctg
     2341 taaatatgac gtcgatgacc cagagacaaa gacactcact gtggaaaacc ttcggccaga
     2401 gtccctctat gagtttctcg tcactccata taccagcgct ggccagggac ccaatgaaac
     2461 atacacaaag gtcacgactc cagatgtacg ctcccacatg ctgctgcaga tcatattacc
     2521 catgaccctc ggcgtcttcc tcagcatcat tgtgtgttac tggaaaagtc agtgggtgaa
     2581 ggagaagtgc tatcctgaca ttcccaatcc atacaagagc agcatcctat cactcataaa
     2641 atccaagaag aatcctcact taataatgaa tgtcaaagac tgcattccag atgtccttga
     2701 agttataaac aaagcagaag gcagcaagac acagtgtgta ggctctggga aacttcacac
     2761 tgaagatgta cccactaagc ctccattggt gccaacagaa aaggattcct ctggccccat
     2821 gcccttcgtc ttccttgaga attttactta cgatcagtca gcttttgatt ctggttctca
     2881 tggcttcatt ccaggacccc taaaaaacac accgcaccaa ctcggactat tggctccgcc
     2941 taacaagtta cagaatgtat tagaaaatga ttacatgaag tccctggtcg aaagtccaac
     3001 tgaagaaact agtttgattt atgtgtccca gctggcttca cctatatgcg gagacaagga
     3061 cagtcttgtc acgaacccac ccatgccagt gtacggttca gagtataaaa agcaaatggc
     3121 acttccgggg agcctcacat cagcttctct gaaggagaac aacttgactt cttaggccaa
     3181 ggtgaacagt aaacaccaag ctgcaccaat gcacttcaca cactacaggc actttggggg
     3241 atgtagctgg caccatacaa acaccacgtg ccctggcctt tggccctggg gtgctcatta
     3301 tccgcaccac tacagactgg cagactgaag accagaagtt tacaatgtgg tctccattca
     3361 ccccgaaggg ttccttagaa ctggcaggat cctggagcat gctgacctta ttagtcaggc
     3421 tcgccctgat tgtagtaccc ctgagcttgc cctagggtag acgccagtca tttcacagag
     3481 cccacctact cagaactgca caacacggct ctggtcctgg gattttggtt tgcagtgaga
     3541 agaaaacatc ttcgtgtaaa cttgacctca cgcttaatag tttaagggtg aaaacaagtg
     3601 gatcagatgt gtgatgaatg ccacaagaga ctgattgctt ttattgtata gatttatcac
     3661 atttaatgga gaggttacaa actagacttt ggccatacct tgaaatgaga acttgtagtc
     3721 actgataaag tacaaagaac tctcttcgtg tctacactaa acctaaccag agatgtagaa
     3781 atggagagga ggctcttcac aggtctccca ctgtctagct tatggcagta aaccaggaga
     3841 gcaaagagct ccacgcttac tgtccaggtg actctaccct gttcaacaga cttcattctt
     3901 ctttagttgt tgactacctc agaagagaag aaaaggacat ttcacagagt gatgcctttt
     3961 acacataata tacccccccc cacacgctgt aactagagga cccacttcac aaactaacct
     4021 ctgctctttg gacgctcggt tgtctggttc acgagaattc cgtctcacat tcttgtgcta
     4081 aaatacaaaa gccctagtac cgggtgcaat ttagctagaa ctttaaatgt agaagtcagt
     4141 tgtgttggct ccgaattcat gtcttttgac aaaatacact tggtcctatc tacgggttcc
     4201 acatccagac tcaaccaacc tcagaaagaa gatattcagg aaaaatagcc tgtactaaac
     4261 tcatgtattt ttcttgttat tccttaaggt attaataatt tccacggcat ttgcacgcat
     4321 caggcattgt ggcacagtat gaagaacacc cactatatta caatgctatt tttaggtaag
     4381 gcttgaattc ctgcagatct tggcgctcct ttaattaact cctggaaagt gccataaagg
     4441 aatgactata tgtaatggct gaacacatac attggttccc tcttcttaac gcttgtcaca
     4501 ttgcagaaca aggtggaaag gtattctttt ttcttgttgt tagctaagcc taataggaat
     4561 gatgactttg tgcacatgtg tggctgttaa gtgcatgtgg ccacagaaca tatagtaata
     4621 gtaaccatga atgttctaca caagctgtcc aatcttctct ttacagaata gaagcctttg
     4681 ttagaaaaca tggctaaacc caacccagga ccaggcagta tcttgaatag tctaggtggg
     4741 agaagacttt gctcagtatt gtttatgttt tcctgtcact ggatttctca ccagaaatgt
     4801 taatgacatt tatttgtgat gtttttcatt tcaattttgt ttaaaaaaca atccacaaaa
     4861 cattagttat tttttttgct gtttcaataa agtccaaatt aaaacatg
//
