LOCUS       NM_001044234            2791 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus oxysterol binding protein-like 9 (Osbpl9), mRNA.
ACCESSION   NM_001044234 XM_001061614 XM_001061772 XM_216477
VERSION     NM_001044234.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BP492064.1, CV110264.1, BP491124.1 and BC089838.1.
            
            On Sep 6, 2008 this sequence version replaced NM_001044234.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                BP492064.1         1-16
            17-677              CV110264.1         1-661
            678-1153            BP491124.1         1-476               c
            1154-2791           BC089838.1         740-2377
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q34"
     gene            1..2791
                     /gene="Osbpl9"
                     /note="oxysterol binding protein-like 9"
                     /db_xref="GeneID:298369"
                     /db_xref="RGD:1311508"
     exon            1..113
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     CDS             3..2174
                     /gene="Osbpl9"
                     /codon_start=1
                     /product="oxysterol-binding protein-related protein 9"
                     /protein_id="NP_001037699.2"
                     /db_xref="GeneID:298369"
                     /db_xref="RGD:1311508"
                     /translation="MASIVEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMR
                     GSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHT
                     LQLQGLDSGFVPSVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKVETLK
                     DTTNSMVESIKHCIVLLQIAKSTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCK
                     SEQRPSSLPVGPVLATLGHHQTPTPNSTGSGNSPPSSSLTPPSHVNLSPNTVPEFSYS
                     SSEDEFYDADEFHQSGSSPKRLIDSSGSASVLTHSSSGNSLKRPDTTESLNSSMSNGT
                     SDADLFDSHDDRDEDGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLE
                     MYADFFAHPDLFVSISDQKDPRDRMVQVVKWYLSAFHAGRRGSVAKKPYNPILGEIFQ
                     CHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNA
                     HIWTKSKFLGMSIGVHNIGQGCVSCLEYGEHYILTFPNGYGRSILTVPWVELGGECSI
                     NCSKTGYSANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGIMYAKYATGE
                     NTVFVDTKKLPIIKKKVRKLEDQNEYESRSLWKDVTFNLKIRDIDAATEAKHRLEERQ
                     RAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGTVKH"
     exon            114..164
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            165..243
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            244..320
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            321..416
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            417..464
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            465..494
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            495..545
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            546..636
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            637..741
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            742..901
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1014
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1015..1133
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1219
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1220..1391
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1476
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1477..1587
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1588..1651
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..1792
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1793..1871
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1872..1963
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            1964..2099
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
     exon            2100..2769
                     /gene="Osbpl9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agatggcgtc catcgtggaa gggccgctga gcaaatggac taacgtgatg aagggatggc
       61 agtatcgttg gttcgtgctg gactacaatg caggactgct ctcctactat acgtccaaag
      121 acaaaatgat gagaggctct cgaagaggat gcgttagact cagaggagct gtgattggta
      181 tagacgacga ggacgacagc accttcacaa tcactgtgga tcagaaaacc ttccacttcc
      241 aggctcgaga tgcagatgag cgagagaagt ggatccatgc cttagaagaa accattcttc
      301 gccatactct tcagcttcaa ggtttggatt caggattcgt tcctagtgtc caagactttg
      361 ataagaagct cactgaggct gacgcttacc tgcagatctt gatagaacaa ttgaagcttt
      421 ttgatgacaa gcttcaaaat tgtaaggatg atgaacagag aaagaaagtt gaaaccctca
      481 aagacacaac aaatagcatg gtagaatcaa ttaaacactg cattgtgttg ctacagattg
      541 ctaaaagtac tattaatcct gtagatgcaa tataccagcc tagtcccttg gagcctgtga
      601 tcagcacaat gccttcccag actgtcttac ctccagaacc cgctcagttg tgtaagtcag
      661 agcagcgtcc gtcctccctg cctgttggac ctgtgttagc taccttggga catcatcaga
      721 ctccaacacc aaatagtaca ggcagtggga attcaccacc tagcagcagt ctaactcctc
      781 ccagccatgt caacttgtct ccaaatacag tcccagagtt ctcttactct agcagtgaag
      841 atgagttcta tgatgctgat gaattccatc aaagtggctc atccccaaag cgcttgatag
      901 attcttctgg atctgcctca gtcctgacac acagcagctc tggaaatagc ttaaaacgcc
      961 cagacaccac agagtcactg aattcctcca tgtccaatgg cacaagcgat gctgatcttt
     1021 ttgactccca tgacgacaga gatgaagatg gggaggcagg gtcagtggag gagcacaaga
     1081 gcgttatcat gcacctctta tcccaggtca ggctcggcat ggacctcaca aaggtagttc
     1141 ttccaacatt tattctcgag agaagatctc tgttagaaat gtatgcagac tttttcgcac
     1201 atcccgacct gttcgtgagc attagtgatc agaaggaccc cagggatcgg atggttcagg
     1261 ttgtgaaatg gtacctctcg gccttccatg caggaaggag aggatcagtg gccaaaaagc
     1321 cgtacaatcc tattttgggt gagatctttc agtgccactg gacgttgccg aatgatactg
     1381 aagagaatgc agagctcgtt tcagaagggc cggttccctg ggtgtctaag aacagtgtaa
     1441 catttgtggc tgagcaagtt tcccatcatc cgcccatttc agccttttat gctgagtgtt
     1501 ttaacaagaa gatacaattc aatgctcata tctggactaa atcaaaattc cttgggatgt
     1561 caattggggt acacaacata ggtcagggct gtgtctcgtg tctggagtat ggtgagcact
     1621 acatcctcac gttccccaat ggctatggaa ggtctatctt gacagtgccc tgggtggaat
     1681 taggaggaga atgcagtatt aactgctcca aaactggcta cagtgcaaat atcgtcttcc
     1741 acaccaagcc gttctatggc ggcaagaagc acagaattac tgcagagatt ttttctccaa
     1801 atgacaagaa atccttctgc tcaattgaag gggaatggaa tggcatcatg tatgcaaaat
     1861 atgcaaccgg ggaaaatact gtctttgtag acaccaagaa gttgcctata atcaagaaaa
     1921 aagtgaggaa gttggaagat cagaacgagt atgagtcccg aagcctttgg aaggatgtca
     1981 ctttcaattt aaaaatcaga gacattgatg cagcaacgga agcaaagcac agacttgaag
     2041 agagacaaag agcagaagcg cgagaacgga aggagaagga aattcagtgg gagacgaggc
     2101 tctttcacga agatggagaa tgctgggttt acgatgaacc tttactgaag cgtcttggta
     2161 ctgtgaagca ttaagctgaa ccgagttcac cgggtgacca gggcagtagg cgtaactaag
     2221 caacaatcga tcttcaggag aacttgtcac ttccttctta atgcggtggt tcctatctca
     2281 gggatactgg acttgacaca gatgaacaat taaagtggaa agcgcttccc ttttctcctc
     2341 tgtggcagtt acaattttga cttcaggcct gagaaaaact tcaggtttcg aaacatgatg
     2401 tctcctcctt ttccaggtcc catgctttga aaaatattta cagagtccca ggtctctgct
     2461 ccagtcctcc agttctgctg ttcaggccta aatcctcatc tcctagttca tataatcttg
     2521 agttctagat acaaacacac aacagctggc agtttttcac aagaacgccc acctgtacat
     2581 actgtttcct cagagttgtc tagaaaatca gtgcaatgta tgagaatcaa gtgttaggga
     2641 atctcatggt cccacctatg acctttcttt tagaattgaa ctatgattag attgtatcta
     2701 aacctgaagt ataattatat gcaatgcttc ttaaagcttc ataaaataat tttccaacct
     2761 ttttaaaaaa aaaaaaaaaa aaaaaaaaaa a
//
