LOCUS       XM_006236518           10662 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein-like 3
            (Osbpl3), transcript variant X4, mRNA.
ACCESSION   XM_006236518
VERSION     XM_006236518.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236518.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006236518.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10662
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..10662
                     /gene="Osbpl3"
                     /note="oxysterol binding protein-like 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 ESTs, 3 long SRA reads, 14 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362360"
                     /db_xref="RGD:1564287"
     CDS             3983..6643
                     /gene="Osbpl3"
                     /codon_start=1
                     /product="oxysterol-binding protein-related protein 3
                     isoform X1"
                     /protein_id="XP_006236580.1"
                     /db_xref="GeneID:362360"
                     /db_xref="RGD:1564287"
                     /translation="MSDEKNLGVSQKLVSPSRSTSSCSSKQGSRQDSWEVVEGLRGEM
                     TYTQEPPAQKGFLLKKRKWPLKGWHKRFFCLEKGILKYAKSQTDIEREKLHGSIDVGL
                     SVMSVKKSSKCIDLDTEEHIYHLKVKSEDVFDEWVSKLRHHRMYRQNEIAMFPRDVNH
                     FFPGSSVTDSAPGVFESVSSRKRSSLSKQNSFPAGSNLSFSCGGDTRVPFWLQSSEDM
                     EKCSKDLAHCHTYLLEMSQLLESMDVLHRTYSAPAINAIQGGAFESPKKEKRSHRRWR
                     SRAIGKDAKGMLQVPKPFSGPVRLHSSNPNLSTLDFGEEKSYSDGSEASSEFSKMQED
                     LCHVAHKVYFALRSAFNSISMEREKLKQLMELDTSSSPSAQVVGLKHALSSALAQNTD
                     LKERLRRIHAESLLLDPPAGPKPGDNLAEEISRDESRALVHQLSNESRLSITDSLSEF
                     FDAQEVLLSPSSSENEISDDDSYVSDISDNLSLDNLSNDLDNERQTLGPVLESSGEAR
                     SKRRTSLPAPGPNTSSVSVWSILRNNIGKDLSKVAMPVELNEPLNTLQRLCEELEYSE
                     LLDKAAHMPSPLERMVYVAAFAISAYASSYFRAGSKPFNPVLGETYECIRQDKGFQFF
                     AEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPAFGDHFEW
                     NKVTSCIHNILSGQRWIEHYGEIVIKNLRDDSCHCKVNFIKAKYWSTNAHEIEGTVFD
                     RSGKAVHRLFGKWHESIYCGGASSSTCVWRANPMPKGYEQYYGFTQFALELNEMDPLS
                     RSLLPPTDTRFRPDQRLLEEGNIEEAEVQKQRIEKLQRERRRVLEENGVEHQPRFFRK
                     SSDDAWVSNGTYLELRKDLGFSKLDHPVLW"
ORIGIN      
        1 gacatctttg tggttgggat tcccggggca ggcagttggg gctcgtactt tcagtcttga
       61 gagtcagccc ccgctatgct tcttatcagt actcaactga ggtttctgcg ttgttgtgtt
      121 ggatgaccgg ctacagaagt gatatgaggc agccttctcc tcttgtcacg tggtctgtaa
      181 cgcttctcta agaactgaga gacagtcaga gtgtgagcaa gagactgtcg gtgcagctga
      241 gagcacgagg gtggtaagtg gagggtgaag caagggggag agagcagagg gtttggggag
      301 aagaggccac acaactctgg aaaacggttt ctatttcagt tttacttctg tggtatgtcc
      361 ttaagtttga aagatcaacc agaagaaaaa gtttaaagga gaaagtaaac tatcatccca
      421 aatctaagcc agaggatcct cgtggtgaat atcttttgtc tacagtatgg agagatgaag
      481 agacgtaacc ctgtaagact gggttcagta aaagtctgta ttctaaaatg agtcatcttt
      541 ttatttaaca aaggggaatg aatgactgat attatgtgaa gtaactttta ttattggact
      601 gccttctcct ggttcagaaa gtatggaaac cacctagctg gtgggaggct ggatggccac
      661 tagtacctcg ggatccctgc cgtttttctc ctgttttttt ggcttgtttt gttttaatga
      721 atgctgttag gattttaatg tctttctgat gtctgtggcc ccaatcaatg ccttgttaac
      781 cagggcttac tattttaata aattgatgtt tggtggattt aattttttga aaccattttg
      841 aggtgtgtta ctctgagttt gtttgtgaat tctttgtttt tgaggagtgt cactcatgtt
      901 gtgtgtttag tgtagagggt ggaacccaca ggtcaagtac tctatcttca gacacaccag
      961 aagaggccat cgaatcccat tacaagtggt tgtgagccac catgtggttg ctgggagttg
     1021 aactcaagac ctctggaaga gcagtcaaag ctcttaactg ctgagccatc tctccagccc
     1081 cctattgttc atatttggac agacaacttt tctactgtca aattggcttc taaagacagt
     1141 ttatactgtt atttataggg gtcctatttt aaatggggat tttttttaaa gacagcgtct
     1201 catgtgttcc aggttgatat tgatctgtct ttgtagccaa gggtgacttt gaacttctga
     1261 tcctggtgtt tccacttcct gcagagtgtt agggttgcag acatgcatca ccatgcctgg
     1321 tataggctgg aatatgtatg cagtgggtag accaaaccca ggacatggtg catgggagct
     1381 cagctctcta ctaactgagc tacatcacta gtccattgag tgggaaggca tataagaatc
     1441 agtagtggag gggctgggga tttagctcag tggtagagcg cttacctagg aagcgcaagg
     1501 ccctgggttc ggtccccagc tccgaaaaaa agaaccaaaa aaaaaaaaaa aaaaaaaaaa
     1561 aaaaagaatc agtagtggaa tatggatttt agcagtggct aaaattgaat tgtaaattag
     1621 ccatcaatta cagataaatc tgaatgttgg gaaaccggct gttttcttgg tgaatttctc
     1681 acgcgtttgc tgcatggaat gataatgcct ggtgggcagc tttatgaatg tctaggactc
     1741 agtgactgcc tgggggttct tggctggctc ctggcctttc tgtctctctg ttgtgaagac
     1801 tcttggctga ccagagccag tgtttgttgc catcagaaga taaaggaaag gagtaaataa
     1861 tttcagctac ctacaaattg gcagctggta atatcgtttc aatggacatc ttttgctgtt
     1921 atcattgttc tgcaagacag gctttcacct tgtatcacca gctattgtgt taatagtgag
     1981 cagtgtttag agagagcatt cgtttaagtc cacgcctctt tttctgtaaa ttttttgggg
     2041 gttattggta caaatcactt gctgccacat ggaaaacacg tatcgtgttt taccttttct
     2101 ttcattttaa ctacccagta aagtaaatgc tggacccgat tgcctgggtg tgaattaaca
     2161 cttgaagagg cagtgtctag ttggccctgc ctcagtggta ctcagccatt ggctgggtca
     2221 gagggagatg agtgtaaatg tgcaggggtg tccttgtact catttgtact aacaaaacag
     2281 ggagaggggc taagtgactt agagtgctat gttctaacgc tgtctggaat gattttaaat
     2341 taaattaaac atacagctag cttattgcat aagtaagccc catatccagg gccccagtgg
     2401 atggctagca tgtctccaag gctccagggt cagcatcact gctggggtag tcctgatgca
     2461 catatacaag gcttcctctt ccttgaccct ttggtgttgc ctttgttctg atgagtggct
     2521 ctccagcaac ttcctctttc ccttggtttc agttgttcca tccaggtgac actataaaac
     2581 tgctttccct gtggccccat tggcaccctc tgatttcagg gcacataaaa ccttcagggc
     2641 atcctgggag gggggggggg ctagttcatt gcagtgcagg atttacttga tcgcctccag
     2701 ctaaggccta catgtttaca tgattttact gaaggctgga atgggcatat tgactgtaac
     2761 tcacagtaga ttggctcttc acaggtattt aaatgcgtca tcacttagaa cttctgcttc
     2821 agctctctgc ttcccagtgg cactgtgttc ttgctgggaa ggacagaatt gggttctctt
     2881 ctttgctgtc ctctcactga tgtcttaagg cacagttgcc agttgagaat gtgctcacaa
     2941 cctgggataa actgttgtga aggtatcacc aggtaacaca tgagagatgc tgagatcttg
     3001 tcaacaggta gacatctaag ggacttgtca tccatctcct cattctgcct agtcttgaat
     3061 caaggccact ctcgtggtct atcaatcatc atcacatgct cactttgatg agccaagagg
     3121 tccatgttct agactgtgtc ttcctcacct aaaggacttg tattaggcaa aggtgaggcc
     3181 tgtggttgat ggccaacgag ctctcttctg agtttgcccc ggaagcagaa atccaatgct
     3241 cctggtggaa ggagcctgat tgtctgtagt gaggagagta ggtgtggttg cccacttaac
     3301 tgagctctgt ggttccatac tctcacaatg tctactttct agcctagagg cctgccaggg
     3361 gtgtgggtta gttagtgttg tataataaac tgggttagtt agtgttgtgt aataaacttt
     3421 ggcaaagcta actctccaaa caaaatgttt tacttgggca tccataagac ttagaattgc
     3481 aaccatcaac acatgtagag gtcagggtga cctcttgcat gtctagggaa caaagacaag
     3541 attacagggt gctacacttt gattgtgaaa tgtcctgcac aggtttatgt attacagtta
     3601 gtccctagcc aatgtcacca ctttgtaaag ttgtggaact tttaagaggt ggggcctagc
     3661 tgaagtaggt cagttgggct tgggccgtga gagttatagc tgatcccgac ttcctctttg
     3721 atgctcgctg ggctgagtct cttgagatgt gagcaggcaa gcagtctcag actcccacca
     3781 ctatggaccc agccttgagc ttcgtgcctt ccctgctttg atggactgta ctctcaaact
     3841 agatttcctc tgagacttcc aaaatggttt tcagacacac tggataagag tcagcaactt
     3901 cctgcgagga cttcatactt tcagctctac gtcttcccat ggcattttga ccgcgctgag
     3961 cccaagggac ctgctcttca caatgagtga cgagaagaat ctgggtgtgt cccaaaagtt
     4021 ggtttcaccc tcaagaagca caagtagctg ttcctccaag caaggaagcc ggcaggacag
     4081 ctgggaagtg gtggaaggat tgagagggga gatgacttac acccaggagc cgcctgcgca
     4141 gaaaggattt ttgctgaaaa agaggaagtg gcccttaaaa ggctggcaca agagattctt
     4201 ctgcctggaa aagggaatct tgaaatatgc caagagccaa actgatattg agagagagaa
     4261 gctgcacggc agtattgacg tggggctctc cgtgatgtct gtgaagaagt catccaaatg
     4321 tatagacctc gacaccgagg agcacatcta ccacctgaag gtaaagtcag aagacgtctt
     4381 tgacgagtgg gtgtccaagc ttcgtcacca cagaatgtac cggcagaatg agatcgccat
     4441 gtttccccgg gatgtcaacc actttttccc agggtcctct gtcacagact ctgctccggg
     4501 agtattcgag tctgtttcca gtaggaagcg cagcagtcta tcaaagcaga attcatttcc
     4561 agctggaagc aatttgtcat tttcttgtgg tggggacaca cgagttccat tctggctaca
     4621 gtcttcagag gacatggaaa agtgctcgaa agacttggca cactgccaca cttatctgct
     4681 ggagatgagc cagctcttag aaagcatgga cgtcttgcat cggacatact cggcgccagc
     4741 tatcaacgcc atccagggtg gagcttttga aagtcccaaa aaggaaaagc gctcgcacag
     4801 gaggtggcgg tccagagcta ttggcaaaga tgctaaagga atgctgcagg tccctaaacc
     4861 tttttctggc ccggtgagac tgcactcctc caatcctaac ttgtcaacac tggactttgg
     4921 agaagagaag tcttactcgg atggttctga agcctcgtcg gagttctcca agatgcagga
     4981 ggacctgtgc catgtcgccc ataaagttta cttcgcttta aggtcagctt tcaatagcat
     5041 atcgatggag agagagaagt tgaagcagct gatggaactg gacacctcct cctccccttc
     5101 tgctcaggtc gtcggtctga agcatgccct gtcatccgcc ctagcacaaa acacagatct
     5161 taaagaacgt ttacgcagaa tccatgcaga gtctctgctc ctcgacccgc ctgctggtcc
     5221 caaaccgggg gacaacctgg cagaggaaat ctccagggat gaaagccgag ccctggtaca
     5281 ccagctctcc aacgagagca ggctgtccat caccgactcc ctttctgagt ttttcgatgc
     5341 ccaggaagtt ctgctatctc ctagctcttc agaaaacgag atctctgatg atgattcata
     5401 cgtcagtgac ataagtgata atctgtcctt agacaacctc agtaacgatt tagacaatga
     5461 aagacagacc ttgggtcctg ttctcgaaag tagtggggaa gccaggtcca aaaggcggac
     5521 cagcctgcca gcgccgggac ccaacaccag tagcgtgagt gtgtggagca tcctgcgcaa
     5581 caacattggg aaggacctgt ccaaggtggc catgccggta gagctgaacg agcccctgaa
     5641 cacactgcag cggctctgcg aggagctaga atacagcgag cttctggaca aggctgcgca
     5701 catgcccagt cccctggaga ggatggtata cgtggcagcc ttcgccatct ctgcatatgc
     5761 atccagctac ttccgggcag gcagcaagcc atttaacccg gtccttggag aaacgtacga
     5821 atgcatccga caggacaagg gtttccagtt ttttgccgag caggtcagcc accacccgcc
     5881 tatctccgcc tgccacgccg agtcccggaa ctttgttttc tggcaagacg tgagatggaa
     5941 aaacaaattc tggggtaaat ccatggaaat tgtcccgatt ggtactaccc atgtgactct
     6001 gcctgcgttt ggagatcact tcgagtggaa caaagtgacc tcctgcatcc acaacatctt
     6061 aagcggacag cgctggatcg agcactatgg tgaaattgtc atcaagaacc tgagagacga
     6121 ctcctgccac tgcaaagtga acttcataaa ggcaaaatac tggagcacta atgcccatga
     6181 gatcgaaggc acggtattcg accgcagtgg gaaggctgtg caccggctgt ttggaaaatg
     6241 gcatgagagc atctactgtg gcggtgcctc ctcctccacg tgtgtctgga gagcaaatcc
     6301 catgccgaaa ggctatgagc agtattatgg cttcacacag tttgcattag agttaaatga
     6361 aatggatcct ttgtcaaggt ctttattacc acccaccgac actcgtttta gaccagatca
     6421 aaggcttcta gaagaaggaa acatagagga ggctgaggtg cagaagcaga ggattgagaa
     6481 gctgcagagg gagaggcgga gggtcctgga ggaaaacggt gtggagcacc agccccggtt
     6541 tttcaggaaa tccagtgacg atgcttgggt gagcaacggg acctatctgg aactgaggaa
     6601 agaccttggc ttttccaagc tggaccatcc cgtcttgtgg tgaaatgtaa gggagagaga
     6661 gaatccctgc actttgccca cagttgcttc cggaagcaac acacacctgt ctgtacgttt
     6721 aaacgatagc agccagaacg atcccttgtg cttagcgtag catcgtaagc actgaagtat
     6781 atacttttct tcagtaagtc tctttacagt ttcaagtgtt atcacgatcg tttatatgaa
     6841 tgtagaacgc ctcggtattt ctttttatat ataaactatt taataaaaat gaaaggttga
     6901 atgttaatgt gtgggttaca aaaaaaaaaa aaaaaccatt taacactaat tttccaaagg
     6961 taagggggaa aattcagatt tatgccttat aaaatcacac tggaaaaaca aaatttccca
     7021 ggtgtgctaa gaaataataa cacccagggc cactcgccca tgcatagcta tctgggttta
     7081 attgggagct gggatatctt tctgcctcag gcagctcttc gattgctcat acagaacaat
     7141 tctgctggtg ctgaagtgcc aagaatactg tcatctcgtc ttcgtggttc aggaatctgt
     7201 acaaagttag tgggatgcct attttttatg taaggcgggt atcacccaac cggaagaagt
     7261 cttctctccc tcgagttctg ttgccttatg tataaaactg cacccagctt gcttagagaa
     7321 gttgccttca tcagagaaga ctccattaat tcagtgtccc gatggcgtcc tagggaggca
     7381 gcaggcattt tgtttttccc cagtaagagc tgaatccttt aaaaacttaa gaaactactt
     7441 ttggcttcct gccccaccca cagcttgcaa gccctccttt tggccccagt tgaggacgaa
     7501 atgtctctca tttagtatag acaaactgta acagcccacg gcagtgtgac cttctaaaac
     7561 ttcagcgaag tcaccggtgg ctttaaataa cctggcatgt tgtttctcca cacagctttg
     7621 gtattctcta cctcttaccg agcaccgtac ttttgacctt gtatagagag tttgaccatc
     7681 tgccttatag acaaacactg ctgttcttct gtgtcgtcct ctgagaaagc tgcaagggtt
     7741 tacctctctc cttgactctc ttcttatttg tgatactctg agttctacat ctgtctcaga
     7801 taggagctac caaagggaaa ctgttgttct tgtaagtgtc ttacttcaaa tcatgatatt
     7861 agaatgaatg tacccagtag ctgaattgtg ttaccagaac aactttgact tctgcccaga
     7921 gcacattaaa ccaaagactg attgctaagc ctttgatgcg aatgtctata gcagttctat
     7981 gaaacactgc gtgtaatgac agggtaaaga gatgcatttg agggccagcg agatgggctc
     8041 agcagtacag cacttaccca gcactgagga aagtctccag gacccacttc aaaggtagaa
     8101 ggagagagcc agctgcgcag agttgacccg tttcacacca gataaccgac gggacagcgc
     8161 gaagttttca cagtggggcg ttgaaggtga atcagcagtc tttgtcgtct acaagtgact
     8221 gtcattttaa gcacctcatt aaatattggt tcatttattc cttgttatgg atacactgag
     8281 atgaaccagc gggaatctca tttccatttc taagtagctg gatggtgcca ccggttcttt
     8341 tgtccctgtt ttgttttttt ctccttttca agtgtttttt ttttttccgt tatccacatt
     8401 ttgaccacag gctggagatg taaggaagga tctcagcagg gaaacgaaac ctcgaggaca
     8461 aatgtgggat tttagtaata ctggctgtga aataggcctg cttgagaggc tgccccaaag
     8521 gagaaggaaa aatgacaaaa accacaaaat taagaatgta cccccagagt cagtacagcc
     8581 agttacttga aaattcttaa agtatctcct gatataattt ctgttggcct tgagctgtaa
     8641 tttggaacca cacaaacagc tgatccaaat gtctctgctg tagtcacctt atttgaatca
     8701 gggacaggaa tgaacagagt atgttccaga accatgtgaa agctctctaa gtcaccacca
     8761 gtgtctggat tacaagcttc cggagatgca gatggtcagg aggtgcacgc tgttacttga
     8821 atcttaaaac tccctgctgg agggaggagg ctgctacatt cctcctgtcc tgtctaacac
     8881 acccttcctc caagtttgta tgtctaggac ttgggtattt tcataaggaa aatagaattg
     8941 tgggtattat tttgggaaga attaagatag ttttaatctt tctgaactga ctttctccaa
     9001 tacacaatgc caaccgctgc cctctttgat gtgcatgttt tagcccctct cattccaatt
     9061 atcctgtttc aagtttatgg tgagttacag atgttctcct agtagtggga ccttgtgcta
     9121 accacacgct gcacctcata tattttcctt ctcagcactc agaaccctga tctgcaaggc
     9181 atcattaaag aatgagtatc ttcgctgtag caaatgaggg gcgcactctc ccccacaggc
     9241 cttctgatga aagcctcagt gcagcttctt cgtgcagttc acatcttgtt gctaggatgc
     9301 tcctggtatt tactaaacat aggcagttca cctcccagac accaggggga ttgaggtact
     9361 aacaaaagag atgcaattca cctcccagac accaggggga gtgaggtact aacaaaagag
     9421 atgcaattca cctcccagac accaggggga gcgaggtact aacaaagaga tacagttcac
     9481 ttcccagaca ccagggggag tgaggtacta acaaagagat gcagttcacg tcccagacac
     9541 cagggagagt gaggtactaa caaaagagat gcagttcact tcccagacag cagggagaat
     9601 ctggtactaa ctaaacatag gcagttcatc tcccagacac cagggggagt caggtactaa
     9661 ctaaacagat ggatgcagtg cgatttttga gacactaggg ggagcccggt actaactaag
     9721 cagccttagg agggttcttg tactaaccag attggggggt gggggttcac tttaggtcat
     9781 aaatacaatt acctactaag tagcaagaat gcctcagcag tccccaagcc ttccagtgcc
     9841 tctgggggct tcctgagttt tttaatgtta gctccattta ggcttctgtt ttcctcatcc
     9901 tattttttaa ttacttccaa taaatcattt gctcagcctt ctagcactgc cattcctctg
     9961 tatttgccag atttatgatg cattgtttta gtctaccctt aaagaagtca agccagaagt
    10021 caagccaaac gtagaggtga gggttacttt actttttact gtaggcctac tgtgcacacc
    10081 ccaagctctc tgagggactg tagccatcag agactcctca caccctctag ctaccaatca
    10141 gagctatacg tttttctcct catcttagga atacaggcta cagtgttcgg tcagaattta
    10201 ttcgaatgtc tttattttta ataccaacat cagcataaat ctatttttgc tagtagatca
    10261 aagctatttt ctcatgcttt gttttctgtc ttgtatcgat ctgtgaatct ggttatcttt
    10321 gttgaaaacc tacatatcaa atgtctctgc aaatcaagat ggtctaaagt gcaagctggt
    10381 tttctgtttg tttgtttttg aaactgggtt caggggctgc agttgtcaga agtgactcaa
    10441 ttgcttcatt tgtgatgaat ttttttatct tcctctgtta ccccacagga tatgcttttg
    10501 ggggaaatga tacttgtaaa tcttctattt agccatttgt aaaatctaaa tcctaccaca
    10561 ctacctgtac cccttttgct tcccccagag gctccttttc atttgctgtc tctctgcccc
    10621 tgtgtagctc actgactgag aataaagaat acagcaaaaa ct
//
