LOCUS       XM_039092033            2834 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X26, mRNA.
ACCESSION   XM_039092033
VERSION     XM_039092033.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092033.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2834
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             15..1466
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X23"
                     /protein_id="XP_038947961.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MKFRSFLTSKGENSEEDEDTEYFDAMEDSTSFITVITEAKEDRK
                     PEGGPGTTSVDWTSADNVREVLDGASFMPKDSCKVKRRVRIPDKPNYSLNLWSIMKNC
                     IGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFSVSSY
                     STTVHRIAKPFNPMLGETFELDRLEDMGLRSLCEQVSHHPPSAAHHVFSKHGWSLWQE
                     ITIASKFRGKYISIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEI
                     VNHKTKDRCQLKFVPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKIVHS
                     SPSSDGKQKTVYQTLPAKLLWRKYPLPENAENMYYFSELALTLNEQEEGVAPTDSRLR
                     PDQRLMERGRWDEANTEKQRLEEKQRLNRRRRLESCTAGCGGEEEKESDGYSPLWFEK
                     RLDPLTGEMACIYKGGYWEAKEKKDWHMCPNIF"
ORIGIN      
        1 agttctaagt cccaatgaag ttcagaagct tcttgacttc caaaggggag aacagtgaag
       61 aagatgaaga tactgagtac tttgatgcca tggaagactc cacatctttc atcaccgtaa
      121 tcaccgaggc caaggaagac agaaagcctg agggtggacc tgggacgacc tctgtggact
      181 ggacctcagc agataatgta cgtgaggtat tagatggtgc ctcattcatg cccaaggatt
      241 catgcaaagt gaagaggcga gtccggatcc ctgacaaacc caactatagc cttaacctct
      301 ggagcatcat gaagaattgc attggccgag agctctcccg gatccccatg ccggtgaact
      361 tcaatgagcc cctgtccatg ctccagcgac ttacagagga cctcgagtac caccacctgc
      421 tggacaaggc ggtgaactgc accagctctg tggagcagat gtgcctggtg gctgccttct
      481 cggtgtcctc ctactccacc accgtgcacc gcatcgccaa gcccttcaac ccgatgctgg
      541 gggagacctt cgagttggat cgcctggagg acatgggcct gcgttctctc tgcgagcagg
      601 tgagccatca ccccccgtct gctgcccacc acgtgttctc taagcatggc tggagcctct
      661 ggcaggagat caccatcgcc agcaagttcc gggggaaata catctccatc atgccacttg
      721 gtgccatcca cctcgaattc caggccagtg gcaatcacta cgtgtggagg aagagtacct
      781 ccactgtgca caacatcatc gtgggcaagc tctggattga ccagtcaggg gacattgaga
      841 ttgtgaacca caagaccaag gaccggtgcc agctgaagtt cgtgccctac agctacttct
      901 ccaaagaggc agcccgaaag gtgactggag tggtgagcga cagccagggc aaggcccact
      961 acgtgctgtc aggttcctgg gatgagcaga tggagtgttc taagattgtg cacagcagcc
     1021 ccagctctga tgggaagcag aaaaccgtgt accagacgct gccagccaag ctgctatgga
     1081 ggaaataccc actgccggag aacgcggaga acatgtacta tttctcggag ctggccctga
     1141 ccctcaacga gcaggaggag ggcgtggcgc ccaccgacag ccgcctgcgg ccggaccagc
     1201 ggctgatgga gaggggccgc tgggacgagg ccaacaccga gaagcagcgc ctggaggaga
     1261 agcagcgcct gaaccggcga cggcggctgg agtcgtgcac ggccggctgt ggcggggagg
     1321 aagagaagga gtcagatggc tattcgccgc tgtggttcga gaagaggctg gacccgctga
     1381 ccggggagat ggcctgcata tacaagggcg gctactggga ggccaaggag aagaaggact
     1441 ggcacatgtg ccccaacatc ttctgagcca ctcctgcgga aaatacaggc acctgcactg
     1501 cctgtcagac ttttctttaa tgcacccgat ttaatacaga acccaccaat gcgtgtgtgc
     1561 gcacgcgcgt gaccacaccg cttaagaagg ggtaagggct gacctgggtt cttgccagcc
     1621 ccaggtcgcc gggtcacgtg tgcccgttgt tatcattgac ttgggcccca tgggcaccct
     1681 agttcccagt taccacaact caggccggct ggccgggcca tgggctgccc aggtcactaa
     1741 ccccaaccca gggaggaaat atttccctcc tagggagcct cttttgactt ttttaagaaa
     1801 aaaaaatatc catttctttc caacgatgag gtttagtaaa tatttttagc acatcactta
     1861 gaagactcac tttccaagtg ttcgttcttg ccacagaacg gttctggcaa gaagcccgtt
     1921 tttaaagacc tgaggaagcc aggccccttt gaatggggaa cacttcaaac acagcccggc
     1981 tttctagctg gactgtccaa gctccaggag cgcaacaccc gcagagacag caggaagcct
     2041 ggctggccgg cccagcatgg catgcagagc ccgaaggggg aaggcagtca aaggcagccg
     2101 cccccccccc cccgtgccag gccttggcca tggtggggca gtatcccagt cccaaagagg
     2161 ccaggaaggg ctgaaaggca gggcccttag gtgcttcctg cccaagaatc aggcccccaa
     2221 atcagcaata aggaacaaac ccttccttta gcctgggctg gtgacccagg ctcccaacac
     2281 ctggcctccc gccttgtcct tcggcggcat cagggtgcct cactccgaag tcctgacatc
     2341 tttatttgcc taatttatat atatatatga tatacaaata tatatgacat agctattttg
     2401 cttaaatttc tatgatacgt gaaagtgaaa aatgatgaag acagactgcc tgtctgagtt
     2461 tggcctcctg ccagccccgc cctctccttg tagccctccc agtggcttct gccaacctta
     2521 gaaatgaaac ctgcccctca gaccctctgc ctccaaccca tctcacttca gtttgatctg
     2581 gaaagttcat tgcagggcct ttctttctac tccaggcctg gttttgtttt ttgttttgtt
     2641 ttttattaaa aaagaaaaag aaaacaccac gtatgaaatg ccttacaatg cccactctag
     2701 agagggggtg ggaagggcgg gggagggaag gtcactcggt ctccctcaga gctggaatgt
     2761 accccttccc agcaggctga gcaagcaagc accttctgat cataataaaa accttggttc
     2821 tggagttttc caca
//
