LOCUS       XM_039092028            3120 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X22, mRNA.
ACCESSION   XM_039092028
VERSION     XM_039092028.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092028.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3120
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             190..1752
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X20"
                     /protein_id="XP_038947956.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MEDSTSFITVITEAKEDSNIINPYGSATRVNLLSSSPRVLGSIQ
                     STASCPSPEALAAWLSHTAHPQAPRARAHQPQCPCRKPEGGPGTTSVDWTSADNVREV
                     LDGASFMPKDSCKVKRRVRIPDKPNYSLNLWSIMKNCIGRELSRIPMPVNFNEPLSML
                     QRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFEL
                     DRLEDMGLRSLCEQVSHHPPSAAHHVFSKHGWSLWQEITIASKFRGKYISIMPLGAIH
                     LEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTKDRCQLKFVPYSYFSK
                     EAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKIVHSSPSSDGKQKTVYQTLPAKLLW
                     RKYPLPENAENMYYFSELALTLNEQEEGVAPTDSRLRPDQRLMERGRWDEANTEKQRL
                     EEKQRLNRRRRLESCTAGCGGEEEKESDGYSPLWFEKRLDPLTGEMACIYKGGYWEAK
                     EKKDWHMCPNIF"
ORIGIN      
        1 cattgagcag ttggccaagc agcacaacag tcttgaacgg gccttctgca acacccctgg
       61 cgggccagcc agctccagca agagcttcag cgagggtgtg tgtgatagca gggctgatgg
      121 gctggaagct tcttgacttc caaaggggag aacagtgaag aagatgaaga tactgagtac
      181 tttgatgcca tggaagactc cacatctttc atcaccgtaa tcaccgaggc caaggaagac
      241 agcaacatca tcaatcctta tggttctgca accagggtga acctgctctc ctcatctcca
      301 agggttctgg gctccataca gtcaactgct tcctgcccgt ctcctgaggc tctggctgcc
      361 tggctgagcc acactgccca tccacaggct cctagagccc gggcccatca gcctcagtgc
      421 ccctgcagaa agcctgaggg tggacctggg acgacctctg tggactggac ctcagcagat
      481 aatgtacgtg aggtattaga tggtgcctca ttcatgccca aggattcatg caaagtgaag
      541 aggcgagtcc ggatccctga caaacccaac tatagcctta acctctggag catcatgaag
      601 aattgcattg gccgagagct ctcccggatc cccatgccgg tgaacttcaa tgagcccctg
      661 tccatgctcc agcgacttac agaggacctc gagtaccacc acctgctgga caaggcggtg
      721 aactgcacca gctctgtgga gcagatgtgc ctggtggctg ccttctcggt gtcctcctac
      781 tccaccaccg tgcaccgcat cgccaagccc ttcaacccga tgctggggga gaccttcgag
      841 ttggatcgcc tggaggacat gggcctgcgt tctctctgcg agcaggtgag ccatcacccc
      901 ccgtctgctg cccaccacgt gttctctaag catggctgga gcctctggca ggagatcacc
      961 atcgccagca agttccgggg gaaatacatc tccatcatgc cacttggtgc catccacctc
     1021 gaattccagg ccagtggcaa tcactacgtg tggaggaaga gtacctccac tgtgcacaac
     1081 atcatcgtgg gcaagctctg gattgaccag tcaggggaca ttgagattgt gaaccacaag
     1141 accaaggacc ggtgccagct gaagttcgtg ccctacagct acttctccaa agaggcagcc
     1201 cgaaaggtga ctggagtggt gagcgacagc cagggcaagg cccactacgt gctgtcaggt
     1261 tcctgggatg agcagatgga gtgttctaag attgtgcaca gcagccccag ctctgatggg
     1321 aagcagaaaa ccgtgtacca gacgctgcca gccaagctgc tatggaggaa atacccactg
     1381 ccggagaacg cggagaacat gtactatttc tcggagctgg ccctgaccct caacgagcag
     1441 gaggagggcg tggcgcccac cgacagccgc ctgcggccgg accagcggct gatggagagg
     1501 ggccgctggg acgaggccaa caccgagaag cagcgcctgg aggagaagca gcgcctgaac
     1561 cggcgacggc ggctggagtc gtgcacggcc ggctgtggcg gggaggaaga gaaggagtca
     1621 gatggctatt cgccgctgtg gttcgagaag aggctggacc cgctgaccgg ggagatggcc
     1681 tgcatataca agggcggcta ctgggaggcc aaggagaaga aggactggca catgtgcccc
     1741 aacatcttct gagccactcc tgcggaaaat acaggcacct gcactgcctg tcagactttt
     1801 ctttaatgca cccgatttaa tacagaaccc accaatgcgt gtgtgcgcac gcgcgtgacc
     1861 acaccgctta agaaggggta agggctgacc tgggttcttg ccagccccag gtcgccgggt
     1921 cacgtgtgcc cgttgttatc attgacttgg gccccatggg caccctagtt cccagttacc
     1981 acaactcagg ccggctggcc gggccatggg ctgcccaggt cactaacccc aacccaggga
     2041 ggaaatattt ccctcctagg gagcctcttt tgactttttt aagaaaaaaa aatatccatt
     2101 tctttccaac gatgaggttt agtaaatatt tttagcacat cacttagaag actcactttc
     2161 caagtgttcg ttcttgccac agaacggttc tggcaagaag cccgttttta aagacctgag
     2221 gaagccaggc ccctttgaat ggggaacact tcaaacacag cccggctttc tagctggact
     2281 gtccaagctc caggagcgca acacccgcag agacagcagg aagcctggct ggccggccca
     2341 gcatggcatg cagagcccga agggggaagg cagtcaaagg cagccgcccc cccccccccg
     2401 tgccaggcct tggccatggt ggggcagtat cccagtccca aagaggccag gaagggctga
     2461 aaggcagggc ccttaggtgc ttcctgccca agaatcaggc ccccaaatca gcaataagga
     2521 acaaaccctt cctttagcct gggctggtga cccaggctcc caacacctgg cctcccgcct
     2581 tgtccttcgg cggcatcagg gtgcctcact ccgaagtcct gacatcttta tttgcctaat
     2641 ttatatatat atatgatata caaatatata tgacatagct attttgctta aatttctatg
     2701 atacgtgaaa gtgaaaaatg atgaagacag actgcctgtc tgagtttggc ctcctgccag
     2761 ccccgccctc tccttgtagc cctcccagtg gcttctgcca accttagaaa tgaaacctgc
     2821 ccctcagacc ctctgcctcc aacccatctc acttcagttt gatctggaaa gttcattgca
     2881 gggcctttct ttctactcca ggcctggttt tgttttttgt tttgtttttt attaaaaaag
     2941 aaaaagaaaa caccacgtat gaaatgcctt acaatgccca ctctagagag ggggtgggaa
     3001 gggcggggga gggaaggtca ctcggtctcc ctcagagctg gaatgtaccc cttcccagca
     3061 ggctgagcaa gcaagcacct tctgatcata ataaaaacct tggttctgga gttttccaca
//
