LOCUS       XM_039092026            3039 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X20, mRNA.
ACCESSION   XM_039092026
VERSION     XM_039092026.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092026.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3039
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             94..1671
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X19"
                     /protein_id="XP_038947954.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MKFRSFLTSKGENSEEDEDTEYFDAMEDSTSFITVITEAKEDRV
                     LGSIQSTASCPSPEALAAWLSHTAHPQAPRARAHQPQCPCRKPEGGPGTTSVDWTSAD
                     NVREVLDGASFMPKDSCKVKRRVRIPDKPNYSLNLWSIMKNCIGRELSRIPMPVNFNE
                     PLSMLQRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLG
                     ETFELDRLEDMGLRSLCEQVSHHPPSAAHHVFSKHGWSLWQEITIASKFRGKYISIMP
                     LGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTKDRCQLKFVPY
                     SYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKIVHSSPSSDGKQKTVYQTLP
                     AKLLWRKYPLPENAENMYYFSELALTLNEQEEGVAPTDSRLRPDQRLMERGRWDEANT
                     EKQRLEEKQRLNRRRRLESCTAGCGGEEEKESDGYSPLWFEKRLDPLTGEMACIYKGG
                     YWEAKEKKDWHMCPNIF"
ORIGIN      
        1 gaggagtaca gactccctct gtggtgcggc acgtcccttg cctgtcacta actgccaaca
       61 tccccaccca ccatgtcgaa gttctaagtc ccaatgaagt tcagaagctt cttgacttcc
      121 aaaggggaga acagtgaaga agatgaagat actgagtact ttgatgccat ggaagactcc
      181 acatctttca tcaccgtaat caccgaggcc aaggaagaca gggttctggg ctccatacag
      241 tcaactgctt cctgcccgtc tcctgaggct ctggctgcct ggctgagcca cactgcccat
      301 ccacaggctc ctagagcccg ggcccatcag cctcagtgcc cctgcagaaa gcctgagggt
      361 ggacctggga cgacctctgt ggactggacc tcagcagata atgtacgtga ggtattagat
      421 ggtgcctcat tcatgcccaa ggattcatgc aaagtgaaga ggcgagtccg gatccctgac
      481 aaacccaact atagccttaa cctctggagc atcatgaaga attgcattgg ccgagagctc
      541 tcccggatcc ccatgccggt gaacttcaat gagcccctgt ccatgctcca gcgacttaca
      601 gaggacctcg agtaccacca cctgctggac aaggcggtga actgcaccag ctctgtggag
      661 cagatgtgcc tggtggctgc cttctcggtg tcctcctact ccaccaccgt gcaccgcatc
      721 gccaagccct tcaacccgat gctgggggag accttcgagt tggatcgcct ggaggacatg
      781 ggcctgcgtt ctctctgcga gcaggtgagc catcaccccc cgtctgctgc ccaccacgtg
      841 ttctctaagc atggctggag cctctggcag gagatcacca tcgccagcaa gttccggggg
      901 aaatacatct ccatcatgcc acttggtgcc atccacctcg aattccaggc cagtggcaat
      961 cactacgtgt ggaggaagag tacctccact gtgcacaaca tcatcgtggg caagctctgg
     1021 attgaccagt caggggacat tgagattgtg aaccacaaga ccaaggaccg gtgccagctg
     1081 aagttcgtgc cctacagcta cttctccaaa gaggcagccc gaaaggtgac tggagtggtg
     1141 agcgacagcc agggcaaggc ccactacgtg ctgtcaggtt cctgggatga gcagatggag
     1201 tgttctaaga ttgtgcacag cagccccagc tctgatggga agcagaaaac cgtgtaccag
     1261 acgctgccag ccaagctgct atggaggaaa tacccactgc cggagaacgc ggagaacatg
     1321 tactatttct cggagctggc cctgaccctc aacgagcagg aggagggcgt ggcgcccacc
     1381 gacagccgcc tgcggccgga ccagcggctg atggagaggg gccgctggga cgaggccaac
     1441 accgagaagc agcgcctgga ggagaagcag cgcctgaacc ggcgacggcg gctggagtcg
     1501 tgcacggccg gctgtggcgg ggaggaagag aaggagtcag atggctattc gccgctgtgg
     1561 ttcgagaaga ggctggaccc gctgaccggg gagatggcct gcatatacaa gggcggctac
     1621 tgggaggcca aggagaagaa ggactggcac atgtgcccca acatcttctg agccactcct
     1681 gcggaaaata caggcacctg cactgcctgt cagacttttc tttaatgcac ccgatttaat
     1741 acagaaccca ccaatgcgtg tgtgcgcacg cgcgtgacca caccgcttaa gaaggggtaa
     1801 gggctgacct gggttcttgc cagccccagg tcgccgggtc acgtgtgccc gttgttatca
     1861 ttgacttggg ccccatgggc accctagttc ccagttacca caactcaggc cggctggccg
     1921 ggccatgggc tgcccaggtc actaacccca acccagggag gaaatatttc cctcctaggg
     1981 agcctctttt gactttttta agaaaaaaaa atatccattt ctttccaacg atgaggttta
     2041 gtaaatattt ttagcacatc acttagaaga ctcactttcc aagtgttcgt tcttgccaca
     2101 gaacggttct ggcaagaagc ccgtttttaa agacctgagg aagccaggcc cctttgaatg
     2161 gggaacactt caaacacagc ccggctttct agctggactg tccaagctcc aggagcgcaa
     2221 cacccgcaga gacagcagga agcctggctg gccggcccag catggcatgc agagcccgaa
     2281 gggggaaggc agtcaaaggc agccgccccc ccccccccgt gccaggcctt ggccatggtg
     2341 gggcagtatc ccagtcccaa agaggccagg aagggctgaa aggcagggcc cttaggtgct
     2401 tcctgcccaa gaatcaggcc cccaaatcag caataaggaa caaacccttc ctttagcctg
     2461 ggctggtgac ccaggctccc aacacctggc ctcccgcctt gtccttcggc ggcatcaggg
     2521 tgcctcactc cgaagtcctg acatctttat ttgcctaatt tatatatata tatgatatac
     2581 aaatatatat gacatagcta ttttgcttaa atttctatga tacgtgaaag tgaaaaatga
     2641 tgaagacaga ctgcctgtct gagtttggcc tcctgccagc cccgccctct ccttgtagcc
     2701 ctcccagtgg cttctgccaa ccttagaaat gaaacctgcc cctcagaccc tctgcctcca
     2761 acccatctca cttcagtttg atctggaaag ttcattgcag ggcctttctt tctactccag
     2821 gcctggtttt gttttttgtt ttgtttttta ttaaaaaaga aaaagaaaac accacgtatg
     2881 aaatgcctta caatgcccac tctagagagg gggtgggaag ggcgggggag ggaaggtcac
     2941 tcggtctccc tcagagctgg aatgtacccc ttcccagcag gctgagcaag caagcacctt
     3001 ctgatcataa taaaaacctt ggttctggag ttttccaca
//
