LOCUS       XM_039092022            3101 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X16, mRNA.
ACCESSION   XM_039092022
VERSION     XM_039092022.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092022.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3101
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             96..1733
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X16"
                     /protein_id="XP_038947950.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MKFRSFLTSKGENSEEDEDTEYFDAMEDSTSFITVITEAKEDSN
                     IINPYGSATRVNLLSSSPRVLGSIQSTASCPSPEALAAWLSHTAHPQAPRARAHQPQC
                     PCRKPEGGPGTTSVDWTSADNVREVLDGASFMPKDSCKVKRRVRIPDKPNYSLNLWSI
                     MKNCIGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFS
                     VSSYSTTVHRIAKPFNPMLGETFELDRLEDMGLRSLCEQVSHHPPSAAHHVFSKHGWS
                     LWQEITIASKFRGKYISIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSG
                     DIEIVNHKTKDRCQLKFVPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSK
                     IVHSSPSSDGKQKTVYQTLPAKLLWRKYPLPENAENMYYFSELALTLNEQEEGVAPTD
                     SRLRPDQRLMERGRWDEANTEKQRLEEKQRLNRRRRLESCTAGCGGEEEKESDGYSPL
                     WFEKRLDPLTGEMACIYKGGYWEAKEKKDWHMCPNIF"
ORIGIN      
        1 ccgaggagta cagactccct ctgtggtgcg gcacgtccct tgcctgtcac taactgccaa
       61 catccccacc caccatgtcg aagttctaag tcccaatgaa gttcagaagc ttcttgactt
      121 ccaaagggga gaacagtgaa gaagatgaag atactgagta ctttgatgcc atggaagact
      181 ccacatcttt catcaccgta atcaccgagg ccaaggaaga cagcaacatc atcaatcctt
      241 atggttctgc aaccagggtg aacctgctct cctcatctcc aagggttctg ggctccatac
      301 agtcaactgc ttcctgcccg tctcctgagg ctctggctgc ctggctgagc cacactgccc
      361 atccacaggc tcctagagcc cgggcccatc agcctcagtg cccctgcaga aagcctgagg
      421 gtggacctgg gacgacctct gtggactgga cctcagcaga taatgtacgt gaggtattag
      481 atggtgcctc attcatgccc aaggattcat gcaaagtgaa gaggcgagtc cggatccctg
      541 acaaacccaa ctatagcctt aacctctgga gcatcatgaa gaattgcatt ggccgagagc
      601 tctcccggat ccccatgccg gtgaacttca atgagcccct gtccatgctc cagcgactta
      661 cagaggacct cgagtaccac cacctgctgg acaaggcggt gaactgcacc agctctgtgg
      721 agcagatgtg cctggtggct gccttctcgg tgtcctccta ctccaccacc gtgcaccgca
      781 tcgccaagcc cttcaacccg atgctggggg agaccttcga gttggatcgc ctggaggaca
      841 tgggcctgcg ttctctctgc gagcaggtga gccatcaccc cccgtctgct gcccaccacg
      901 tgttctctaa gcatggctgg agcctctggc aggagatcac catcgccagc aagttccggg
      961 ggaaatacat ctccatcatg ccacttggtg ccatccacct cgaattccag gccagtggca
     1021 atcactacgt gtggaggaag agtacctcca ctgtgcacaa catcatcgtg ggcaagctct
     1081 ggattgacca gtcaggggac attgagattg tgaaccacaa gaccaaggac cggtgccagc
     1141 tgaagttcgt gccctacagc tacttctcca aagaggcagc ccgaaaggtg actggagtgg
     1201 tgagcgacag ccagggcaag gcccactacg tgctgtcagg ttcctgggat gagcagatgg
     1261 agtgttctaa gattgtgcac agcagcccca gctctgatgg gaagcagaaa accgtgtacc
     1321 agacgctgcc agccaagctg ctatggagga aatacccact gccggagaac gcggagaaca
     1381 tgtactattt ctcggagctg gccctgaccc tcaacgagca ggaggagggc gtggcgccca
     1441 ccgacagccg cctgcggccg gaccagcggc tgatggagag gggccgctgg gacgaggcca
     1501 acaccgagaa gcagcgcctg gaggagaagc agcgcctgaa ccggcgacgg cggctggagt
     1561 cgtgcacggc cggctgtggc ggggaggaag agaaggagtc agatggctat tcgccgctgt
     1621 ggttcgagaa gaggctggac ccgctgaccg gggagatggc ctgcatatac aagggcggct
     1681 actgggaggc caaggagaag aaggactggc acatgtgccc caacatcttc tgagccactc
     1741 ctgcggaaaa tacaggcacc tgcactgcct gtcagacttt tctttaatgc acccgattta
     1801 atacagaacc caccaatgcg tgtgtgcgca cgcgcgtgac cacaccgctt aagaaggggt
     1861 aagggctgac ctgggttctt gccagcccca ggtcgccggg tcacgtgtgc ccgttgttat
     1921 cattgacttg ggccccatgg gcaccctagt tcccagttac cacaactcag gccggctggc
     1981 cgggccatgg gctgcccagg tcactaaccc caacccaggg aggaaatatt tccctcctag
     2041 ggagcctctt ttgacttttt taagaaaaaa aaatatccat ttctttccaa cgatgaggtt
     2101 tagtaaatat ttttagcaca tcacttagaa gactcacttt ccaagtgttc gttcttgcca
     2161 cagaacggtt ctggcaagaa gcccgttttt aaagacctga ggaagccagg cccctttgaa
     2221 tggggaacac ttcaaacaca gcccggcttt ctagctggac tgtccaagct ccaggagcgc
     2281 aacacccgca gagacagcag gaagcctggc tggccggccc agcatggcat gcagagcccg
     2341 aagggggaag gcagtcaaag gcagccgccc cccccccccc gtgccaggcc ttggccatgg
     2401 tggggcagta tcccagtccc aaagaggcca ggaagggctg aaaggcaggg cccttaggtg
     2461 cttcctgccc aagaatcagg cccccaaatc agcaataagg aacaaaccct tcctttagcc
     2521 tgggctggtg acccaggctc ccaacacctg gcctcccgcc ttgtccttcg gcggcatcag
     2581 ggtgcctcac tccgaagtcc tgacatcttt atttgcctaa tttatatata tatatgatat
     2641 acaaatatat atgacatagc tattttgctt aaatttctat gatacgtgaa agtgaaaaat
     2701 gatgaagaca gactgcctgt ctgagtttgg cctcctgcca gccccgccct ctccttgtag
     2761 ccctcccagt ggcttctgcc aaccttagaa atgaaacctg cccctcagac cctctgcctc
     2821 caacccatct cacttcagtt tgatctggaa agttcattgc agggcctttc tttctactcc
     2881 aggcctggtt ttgttttttg ttttgttttt tattaaaaaa gaaaaagaaa acaccacgta
     2941 tgaaatgcct tacaatgccc actctagaga gggggtggga agggcggggg agggaaggtc
     3001 actcggtctc cctcagagct ggaatgtacc ccttcccagc aggctgagca agcaagcacc
     3061 ttctgatcat aataaaaacc ttggttctgg agttttccac a
//
